Salt Stress, Microbes, and Plant Interactions: Mechanisms and Molecular Approaches pp 105-132 | Cite as
An Enigma in the Genetic Responses of Plants to Salt Stresses
- 253 Downloads
Abstract
Soil salinity is one of the main factors restricting crop production throughout the world. Various salt tolerance traits and the genes controlling these traits are responsible for coping with salinity stress in plants. These coping mechanisms include osmotic tolerance, ion exclusion, and tissue tolerance. Plants exposed to salinity stress sense the stress conditions, convey specific stimuli signals, and initiate responses against stress through the activation of tolerance mechanisms that include multiple genes and pathways. Advances in our understanding of the genetic responses of plants to salinity and their connections with yield improvement are essential for attaining sustainable agriculture. Although a wide range of studies have been conducted that demonstrate genetic variations in response to salinity stress, numerous questions need to be answered to fully understand plant tolerance to salt stress. This chapter provides an overview of previous studies on the genetic control of salinity stress in plants, including signaling, tolerance mechanisms, and the genes, pathways, and epigenetic regulators necessary for plant salinity tolerance.
Keywords
Salinity stress Osmotic tolerance Tolerance mechanism and signaling pathwaysNotes
Acknowledgments
The authors wish to acknowledge Universiti Putra Malaysia (UPM) for the financial supports.
References
- Agarwal M, Katiyar-Agarwal S, Sahi C, Gallie DR, Grover A (2001) Arabidopsis thaliana Hsp100 proteins: kith and kin. Cell Stress Chaperones 6:219–224PubMedPubMedCentralCrossRefGoogle Scholar
- Agarwal P, Agarwal PK, Nair S, Sopory S, Reddy M (2007) Stress-inducible DREB2A transcription factor from Pennisetum glaucum is a phosphoprotein and its phosphorylation negatively regulates its DNA-binding activity. Mol Gen Genomics 277:189–198CrossRefGoogle Scholar
- Agarwal PK, Gupta K, Lopato S, Agarwal P (2017) Dehydration responsive element binding transcription factors and their applications for the engineering of stress tolerance. J Exp Bot 68:2135–2148PubMedCrossRefGoogle Scholar
- Ali Z, Park HC, Ali A, Oh DH, Aman R, Kropornicka A, Hong H, Choi W, Chung WS, Kim WY, Bressan RA, Bohnert HJ, Lee SY, Yun DJ (2012) TsHKT1; 2, a HKT1 homolog from the extremophile Arabidopsis relative Thellungiella salsuginea, shows K+ specificity in the presence of NaCl. Plant Physiol 158:1463–1474PubMedPubMedCentralCrossRefGoogle Scholar
- Anderson JP, Badruzsaufari E, Schenk PM, Manners JM, Desmond OJ, Ehlert C, Maclean DJ, Ebert PR, Kazan K (2004) Antagonistic interaction between abscisic acid and jasmonate-ethylene signaling pathways modulates defense gene expression and disease resistance in Arabidopsis. Plant Cell 16:3460–3479PubMedPubMedCentralCrossRefGoogle Scholar
- Aneja M, Gianfagna T, Ng E (1999) The roles of abscisic acid and ethylene in the abscission and senescence of cocoa flowers. Plant Growth Regul 27:149–155CrossRefGoogle Scholar
- Apse MP, Blumwald E (2007) Na+ transport in plants. FEBS Lett 581:2247–2254PubMedCrossRefGoogle Scholar
- Asensi-Fabado MA, Amtmann A, Perrella G (2017) Plant responses to abiotic stress: the chromatin context of transcriptional regulation. Biochim Biophys Acta 1860:106–122CrossRefGoogle Scholar
- Ashraf M, Akram NA (2009) Improving salinity tolerance of plants through conventional breeding and genetic engineering: an analytical comparison. Biotechnol Adv 27:744–752PubMedCrossRefGoogle Scholar
- Avila-Ospina L, Moison M, Yoshimoto K, Masclaux-Daubresse C (2014) Autophagy, plant senescence, and nutrient recycling. J Exp Bot 65:3799–3811PubMedCrossRefGoogle Scholar
- Azizi P, Rafii MY, Abdullah SN, Nejat N, Maziah M, Hanafi MM, Latif MA, Sahebi M (2016) Toward understanding of rice innate immunity against Magnaporthe oryzae. Crit Rev Biotechnol 36:165–174PubMedCrossRefGoogle Scholar
- Badenoch-Jones J, Parker C, Letham D, Singh S (1996) Effect of cytokinins supplied via the xylem at multiples of endogenous concentrations on transpiration and senescence in derooted seedlings of oat and wheat. Plant Cell Environ 19:504–516CrossRefGoogle Scholar
- Balazadeh S, Riaño-Pachón DM, Mueller-Roeber B (2008) Transcription factors regulating leaf senescence in Arabidopsis thaliana. Plant Biol 1:63–75CrossRefGoogle Scholar
- Balazadeh S, Siddiqui H, Allu AD, Matallana-Ramirez LP, Caldana C, Mehrnia M, Zanor MI, Köhler B, Mueller-Roeber B (2010) A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence. Plant J 62:250–264PubMedCrossRefGoogle Scholar
- Barragán V, Leidi EO, Andrés Z, Rubio L, De Luca A, Fernández JA, Cubero B, Pardo JM (2012) Ion exchangers NHX1 and NHX2 mediate active potassium uptake into vacuoles to regulate cell turgor and stomatal function in Arabidopsis. Plant Cell 24:1127–1142PubMedPubMedCentralCrossRefGoogle Scholar
- Bassil E, Ohto MA, Esumi T, Tajima H, Zhu Z, Cagnac O, Belmonte M, Peleg Z, Yamaguchi T, Blumwald E (2011a) The Arabidopsis intracellular Na+/H+ antiporters NHX5 and NHX6 are endosome associated and necessary for plant growth and development. Plant Cell 23:224–239PubMedPubMedCentralCrossRefGoogle Scholar
- Bassil E, Tajima H, Liang YC, Ohto MA, Ushijima K, Nakano R, Esumi T, Coku A, Belmonte M, Blumwald E (2011b) The Arabidopsis Na+/H+ antiporters NHX1 and NHX2 control vacuolar pH and K+ homeostasis to regulate growth, flower development, and reproduction. Plant Cell 23:3482–3497PubMedPubMedCentralCrossRefGoogle Scholar
- Bechtold U, Albihlal WS, Lawson T, Fryer MJ, Sparrow PA, Richard F, Persad R, Bowden L, Hickman R, Martin C, Beynon JL, Buchanan-Wollaston V, Baker NR, Morison JI, Schöffl F, Ott S, Mullineaux PM (2013) Arabidopsis heat shock transcription factorA1b overexpression enhances water productivity, resistance to drought, and infection. J Exp Bot 64:3467–3481PubMedPubMedCentralCrossRefGoogle Scholar
- Bhowmick R (2012) Study of genes involved in salt tolerance during early growth stages in kharchia local wheat. IARI, National Research Centre on Plant Biotechnology, New DelhiGoogle Scholar
- Bilichak A, Ilnystkyy Y, Hollunder J, Kovalchuk I (2012) The progeny of Arabidopsis thaliana plants exposed to salt exhibit changes in DNA methylation, histone modifications and gene expression. PLoS One 7:e30515PubMedPubMedCentralCrossRefGoogle Scholar
- Blumwald E (2000) Sodium transport and salt tolerance in plants. Curr Opin Cell Biol 12:431–434PubMedCrossRefGoogle Scholar
- Boyko A, Kovalchuk I (2011) Genome instability and epigenetic modification—heritable responses to environmental stress. Curr Opin Plant Biol 14:260–266PubMedCrossRefGoogle Scholar
- Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, KimYS PCA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V (2011) High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 23:873–894PubMedPubMedCentralCrossRefGoogle Scholar
- Breiman A (2014) Plant Hsp90 and its co-chaperones. Curr Protein Pept Sci 15:232–244PubMedCrossRefGoogle Scholar
- Buchanan-Wollaston V (1997) The molecular biology of leaf senescence. J Exp Bot 48:181–199CrossRefGoogle Scholar
- Bukau B, Horwich AL (1998) The Hsp70 and Hsp60 chaperone machines. Cell 92:351–366PubMedCrossRefGoogle Scholar
- Byrt CS, Platten JD, Spielmeyer W, James RA, Lagudah ES, Dennis ES, Tester M, Munns R (2007) HKT1; 5-like cation transporters linked to Na+ exclusion loci in wheat, Nax2 and Kna1. Plant Physiol 143:1918–1928PubMedPubMedCentralCrossRefGoogle Scholar
- Casaretto JA, El-kereamy A, Zeng B, Stiegelmeyer SM, Chen X, Bi Y-M, Rothstein SJ (2016) Expression of OsMYB55 in maize activates stress-responsive genes and enhances heat and drought tolerance. BMC Genomics 17:312PubMedPubMedCentralCrossRefGoogle Scholar
- Chakraborty K, Sairam RK, Bhattacharya R (2012) Differential expression of salt overly sensitive pathway genes determines salinity stress tolerance in Brassica genotypes. Plant Physiol Biochem 51:90–101PubMedCrossRefGoogle Scholar
- Chaves MM, Flexas J, Pinheiro C (2009) Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell. Ann Bot 103:551–560PubMedCrossRefGoogle Scholar
- Chen LT, Luo M, Wang YY, Wu K (2010) Involvement of Arabidopsi s histone deacetylase HDA6 in ABA and salt stress response. J Exp Bot 61:3345–3353PubMedPubMedCentralCrossRefGoogle Scholar
- Cheong YH, Kim KN, Pandey GK, Gupta R, Grant JJ, Luan S (2003) CBL1, a calcium sensor that differentially regulates salt, drought, and cold responses in Arabidopsis. Plant Cell 15:1833–1845PubMedPubMedCentralCrossRefGoogle Scholar
- Choi CS, Sano H (2007) Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol Genet Genomics 277:589–600PubMedCrossRefGoogle Scholar
- Cong L, Chai TY, Zhang YX (2008) Characterization of the novel gene BjDREB1B encoding a DRE-binding transcription factor from Brassica juncea L. Biochem Biophys Res Commun 371:702–706PubMedCrossRefGoogle Scholar
- Cortina C, Culiáñez-Macià FA (2005) Tomato abiotic stress enhanced tolerance by trehalose biosynthesis. Plant Sci 169:75–82CrossRefGoogle Scholar
- Craig Plett D, Møller IS (2010) Na+ transport in glycophytic plants: what we know and would like to know. Plant Cell Environ 33:612–626PubMedCrossRefGoogle Scholar
- Das K, Roychoudhury A (2014) Reactive oxygen species (ROS) and response of antioxidants as ROS-scavengers during environmental stress in plants. Front Environ Sci 2:53CrossRefGoogle Scholar
- Dassanayake M, Oh DH, Haas JS, Hernandez A, Hong H, Ali S, Yun DJ, Bressan RA, Zhu JK, Bohnert HJ, Cheeseman JM (2011) The genome of the extremophile crucifer Thellungiella parvula. Nat Genet 43:913PubMedPubMedCentralCrossRefGoogle Scholar
- De Michele R, Formentin E, Todesco M, Toppo S, Carimi F, Zottini M, Barizza E, Ferrarini A, Delledonne M, Fontana P, Lo Schiavo F (2009) Transcriptome analysis of Medicago truncatula leaf senescence: similarities and differences in metabolic and transcriptional regulations as compared with Arabidopsis, nodule senescence and nitric oxide signalling. New Phytol 181:563–575PubMedCrossRefGoogle Scholar
- Debat V, David P (2001) Mapping phenotypes: canalization, plasticity and developmental stability. Trends Ecol Evol 16:555–561CrossRefGoogle Scholar
- Deinlein U, Stephan AB, Horie T, Luo W, Xu G, Schroeder JI (2014) Plant salt-tolerance mechanisms. Trends Plant Sci 19:371–379PubMedPubMedCentralCrossRefGoogle Scholar
- Dewey DR (1962) Breeding crested wheatgrass for salt tolerance. Crop Sci 2:403–407CrossRefGoogle Scholar
- Diaz-Mendoza M, Velasco-Arroyo B, Santamaria ME, González-Melendi P, Martinez M, Diaz I (2016) Plant senescence and proteolysis: two processes with one destiny. Genet Mol Biol 39:329–338PubMedPubMedCentralCrossRefGoogle Scholar
- Dubouzet JG, Sakuma Y, Ito Y, Kasuga M, Dubouzet EG, Miura S, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2003) OsDREB genes in rice, Oryza sativa L, encode transcription activators that function in drought-, high-salt-and cold-responsive gene expression. Plant J 33:751–763PubMedCrossRefGoogle Scholar
- Feki K, Quintero FJ, Khoudi H, Leidi EO, Masmoudi K, Pardo JM, Brini F (2014) A constitutively active form of a durum wheat Na+/H+ antiporter SOS1 confers high salt tolerance to transgenic Arabidopsis. Plant Cell Rep 33:277–288PubMedCrossRefGoogle Scholar
- Feng S, Jacobsen SE, Reik W (2010) Epigenetic reprogramming in plant and animal development. Science 330:622–627PubMedPubMedCentralCrossRefGoogle Scholar
- Fernandez P, Di Rienzo J, Fernandez L, Hopp HE, Paniego N, Heinz RA (2008) Transcriptomic identification of candidate genes involved in sunflower responses to chilling and salt stresses based on cDNA microarray analysis. BMC Plant Biol 8:11PubMedPubMedCentralCrossRefGoogle Scholar
- Flowers TJ, Colmer TD (2008) Salinity tolerance in halophytes. New Phytol 179:945–963PubMedCrossRefGoogle Scholar
- Flowers T, Yeo A (1995) Breeding for salinity resistance in crop plants: where next. Funct Plant Biol 22:875–884CrossRefGoogle Scholar
- Flowers TJ, Galal HK, Bromham L (2010) Evolution of halophytes: multiple origins of salt tolerance in land plants. Funct Plant Biol 37:604–612CrossRefGoogle Scholar
- Fragkostefanakis S, Simm S, Paul P, Bublak D, SCHARF KD, Schleiff E (2015) Chaperone network composition in Solanum lycopersicum explored by transcriptome profiling and microarray meta-analysis. Plant Cell Environ 38:693–709PubMedCrossRefGoogle Scholar
- Fujimoto M, Nakai A (2010) The heat shock factor family and adaptation to proteotoxic stress. FEBS J 277:4112–4125PubMedCrossRefGoogle Scholar
- Fujita Y, Fujita M, Shinozaki K, Yamaguchi-Shinozaki K (2011) ABA-mediated transcriptional regulation in response to osmotic stress in plants. J Plant Res 124:509–525PubMedCrossRefGoogle Scholar
- Fujita Y, Yoshida T, Yamaguchi-Shinozaki K (2013) Pivotal role of the AREB/ABF-SnRK2 pathway in ABRE-mediated transcription in response to osmotic stress in plants. Physiol Plant 147:15–27PubMedCrossRefGoogle Scholar
- Gao M-J, Allard G, Byass L, Flanagan AM, Singh J (2002) Regulation and characterization of four CBF transcription factors from Brassica napus. Plant Mol Biol 49:459–471PubMedCrossRefGoogle Scholar
- Gill SS, Tuteja N (2010) Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants. Plant Physiol Biochem 48:909–930CrossRefGoogle Scholar
- Gilroy S, Trewavas A (2001) Signal processing and transduction in plant cells: the end of the beginning. Nat Rev Mol Cell Biol 2:307PubMedCrossRefGoogle Scholar
- Gilroy S, Suzuki N, Miller G, Choi W-G, Toyota M, Devireddy AR, Mittler R (2014) A tidal wave of signals: calcium and ROS at the forefront of rapid systemic signaling. Trends Plant Sci 19:623–630PubMedCrossRefGoogle Scholar
- Gregersen PL, Holm PB (2007) Transcriptome analysis of senescence in the flag leaf of wheat (Triticum aestivum L.). Plant Biotechnol J 5:192–206PubMedCrossRefGoogle Scholar
- Grewal SI, Jia S (2007) Heterochromatin revisited. Nat Rev Genet 8:35PubMedCrossRefGoogle Scholar
- Gu Y-Q, Yang C, Thara VK, Zhou J, Martin GB (2000) Pti4 is induced by ethylene and salicylic acid, and its product is phosphorylated by the Pto kinase. Plant Cell 12:771–785PubMedPubMedCentralCrossRefGoogle Scholar
- Guo M, Liu JH, Ma X, Luo DX, Gong ZH, Lu MH (2016) The plant heat stress transcription factors (HSFs): structure, regulation, and function in response to abiotic stresses. Front Plant Sci 7:114PubMedPubMedCentralGoogle Scholar
- Gupta B, Huang B (2014) Mechanism of salinity tolerance in plants: physiological, biochemical, and molecular characterization. Int’l J Genom 2014:701596. https://doi.org/10.1155/2014/701596CrossRefGoogle Scholar
- Hamilton EW, Heckathorn SA (2001) Mitochondrial adaptations to NaCl. Complex I is protected by anti-oxidants and small heat shock proteins, whereas complex II is protected by proline and betaine. Plant Physiol 126:1266–1274PubMedPubMedCentralCrossRefGoogle Scholar
- Han Y, Yin S, Huang L, Wu X, Zeng J, Liu X, Qiu L, Munns R, Chen ZH, Zhang G (2018) A sodium transporter HvHKT1; 1 confers salt tolerance in Barley via regulating tissue and cell ion homeostasis. Plant Cell Physiol 59:1976–1989PubMedCrossRefGoogle Scholar
- Hasegawa PM, Bressan RA, Zhu JK, Bohnert HJ (2000) Plant cellular and molecular responses to high salinity. Annu Rev Plant Biol 51:463–499CrossRefGoogle Scholar
- Hauser F, Horie T (2010) A conserved primary salt tolerance mechanism mediated by HKT transporters: a mechanism for sodium exclusion and maintenance of high K+/Na+ ratio in leaves during salinity stress. Plant Cell Environ 33:552–565PubMedCrossRefGoogle Scholar
- Havlov AM, Dobrev PI, Motyka V, Storchová H, Libus J, Dobrá J, Malbeck J, Gaudinová A, Vanková R (2008) The role of cytokinins in responses to water deficit in tobacco plants over-expressing trans-zeatin O-glucosyltransferase gene under 35S or SAG12 promoters. Plant Cell Environ 31:341–353CrossRefGoogle Scholar
- He P, Osaki M, Takebe M, Shinano T, Wasaki J (2005) Endogenous hormones and expression of senescence-related genes in different senescent types of maize. J Exp Bot 56:1117–1128PubMedCrossRefGoogle Scholar
- Hmida-Sayari A, Gargouri-Bouzid R, Bidani A, Jaoua L, Savouré A, Jaoua S (2005) Overexpression of Δ1-pyrroline-5-carboxylate synthetase increases proline production and confers salt tolerance in transgenic potato plants. Plant Sci 169:746–752CrossRefGoogle Scholar
- Horie T, Hauser F, Schroeder JI (2009) HKT transporter-mediated salinity resistance mechanisms in Arabidopsis and monocot crop plants. Trends Plant Sci 14:660–668PubMedPubMedCentralCrossRefGoogle Scholar
- Hörtensteiner S, Kräutler B (2011) Chlorophyll breakdown in higher plants. Biochim Biophys Acta 1807:977–988PubMedCrossRefGoogle Scholar
- Hu Y, Chen L, Wang H, Zhang L, Wang F, Yu D (2013) Arabidopsis transcription factor WRKY8 functions antagonistically with its interacting partner VQ9 to modulate salinity stress tolerance. Plant J 74:730–745PubMedCrossRefGoogle Scholar
- Huang B, Xu C (2008) Identification and characterization of proteins associated with plant tolerance to heat stress. J Integr Plant Biol 50:1230–1237PubMedCrossRefGoogle Scholar
- Huang GT, Ma SL, Bai LP, Zhang L, Ma H, Jia P, Liu J, Zhong M, Guo ZF (2012) Signal transduction during cold, salt, and drought stresses in plants. Mol Biol Rep 39:969–987CrossRefGoogle Scholar
- Huang YC, Niu CY, Yang CR, Jinn TL (2016) The heat stress factor HSFA6b connects ABA signaling and ABA-mediated heat responses. Plant Physiol 172:1182–1199PubMedPubMedCentralGoogle Scholar
- Hwang SM, Kim DW, Woo MS, Jeong HS, Son YS, Akhter S, Choi GJ, Bahk JD (2014) Functional characterization of Arabidopsis HsfA6a as a heat-shock transcription factor under high salinity and dehydration conditions. Plant Cell Environ 37:1202–1222PubMedCrossRefGoogle Scholar
- Ito Y, Katsura K, Maruyama K, Taji T, Kobayashi M, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2006) Functional analysis of rice DREB1/CBF-type transcription factors involved in cold-responsive gene expression in transgenic rice. Plant Cell Physiol 47:141–153PubMedCrossRefGoogle Scholar
- Jagadish KS, Kishor K, Polavarapu B, Bahuguna RN, von Wirén N, Sreenivasulu N (2015) Staying alive or going to die during terminal senescence-an enigma surrounding yield stability. Front Plant Sci 6:1070PubMedPubMedCentralCrossRefGoogle Scholar
- James RA, Davenport RJ, Munns R (2006) Physiological characterization of two genes for Na+ exclusion in durum wheat, Nax1 and Nax2. Plant Physiol 142:1537–1547PubMedPubMedCentralCrossRefGoogle Scholar
- James RA, Blake C, Zwart AB, Hare RA, Rathjen AJ, Munns R (2012) Impact of ancestral wheat sodium exclusion genes Nax1 and Nax2 on grain yield of durum wheat on saline soils. Funct Plant Biol 39:609–618CrossRefGoogle Scholar
- Ji H, Pardo JM, Batelli G, Van Oosten MJ, Bressan RA, Li X (2013) The Salt Overly Sensitive (SOS) pathway: established and emerging roles. Mol Plant 6:275–286PubMedCrossRefGoogle Scholar
- Johnson RR, Wagner RL, Verhey SD, Walker-Simmons MK (2002) The abscisic acid-responsive kinase PKABA1 interacts with a seed-specific abscisic acid response element-binding factor, TaABF, and phosphorylates TaABF peptide sequences. Plant Physiol 130:837–846PubMedPubMedCentralCrossRefGoogle Scholar
- Kaldis A, Tsementzi D, Tanriverdi O, Vlachonasios KE (2011) Arabidopsis thaliana transcriptional co-activators ADA2b and SGF29a are implicated in salt stress responses. Planta 233:749–762PubMedCrossRefGoogle Scholar
- Kasuga M, Liu Q, Miura S, Yamaguchi-Shinozaki K, Shinozaki K (1999) Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat Biotechnol 17:287PubMedCrossRefGoogle Scholar
- Kawasaki S, Borchert C, Deyholos M, Wang H, Brazille S, Kawai K, Galbraith D, Bohnert HJ (2001) Gene expression profiles during the initial phase of salt stress in rice. Plant Cell 13:889–905PubMedPubMedCentralCrossRefGoogle Scholar
- Kazan K (2015) Diverse roles of jasmonates and ethylene in abiotic stress tolerance. Trends Plant Sci 20:219–229PubMedCrossRefGoogle Scholar
- Kiegle E, Moore CA, Haseloff J, Tester MA, Knight MR (2000) Cell-type-specific calcium responses to drought, salt and cold in the Arabidopsis root. Plant J 23:267–278PubMedCrossRefGoogle Scholar
- Kim J, Yenari M (2017) Heat shock proteins and the stress response. In: Primer on cerebrovascular diseases, 2nd edn. Elsevier, Amsterdam, pp 273–275CrossRefGoogle Scholar
- Kim JM, To TK, Ishida J, Morosawa T, Kawashima M, Matsui A, Toyoda T, Kimura H, Shinozaki K, Seki M (2008) Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana. Plant Cell Physiol 49:1580–1588PubMedCrossRefGoogle Scholar
- Kim J-M, To TK, Ishida J, Matsui A, Kimura H, Seki M (2012) Transition of chromatin status during the process of recovery from drought stress in Arabidopsis thaliana. Plant Cell Physiol 53:847–856PubMedCrossRefGoogle Scholar
- Kleizen B, Braakman I (2004) Protein folding and quality control in the endoplasmic reticulum. Curr Opin Cell Biol 16:343–349PubMedCrossRefGoogle Scholar
- Kooyers NJ (2015) The evolution of drought escape and avoidance in natural herbaceous populations. Plant Sci 234:155–162CrossRefGoogle Scholar
- Krishna P, Gloor G (2001) The Hsp90 family of proteins in Arabidopsis thaliana. Cell Stress Chaperones 6:238–246PubMedPubMedCentralCrossRefGoogle Scholar
- Kudla J, Batistič O, Hashimoto K (2010) Calcium signals: the lead currency of plant information processing. Plant Cell 22:541–563PubMedPubMedCentralCrossRefGoogle Scholar
- Kurdistani SK, Tavazoie S, Grunstein M (2004) Mapping global histone acetylation patterns to gene expression. Cell 117:721–733CrossRefGoogle Scholar
- Lata C, Yadav A, Prasad M (2011) Role of plant transcription factors in abiotic stress tolerance. In: Abiotic stress response in plants-physiological, biochemical and genetic perspectives. InTech https://www.intechopen.com/books/abiotic-stress-response-in-plants-physiological-biochemical-and-genetic-perspectives/role-of-plant-transcription-factors-in-abiotic-stress-tolerance. Accessed on 23 Feb 2019
- Lee S, Lee EJ, Yang EJ, Lee JE, Park AR, Song WH, Park OK (2004) Proteomic identification of annexins, calcium-dependent membrane binding proteins that mediate osmotic stress and abscisic acid signal transduction in Arabidopsis. Plant Cell 16:1378–1391PubMedPubMedCentralCrossRefGoogle Scholar
- Leng L, Liang Q, Jiang J, Zhang C, Hao Y, Wang X, Su W (2017) A subclass of HSP70s regulate development and abiotic stress responses in Arabidopsis thaliana. J Plant Res 130:349–363CrossRefGoogle Scholar
- Li XP, Tian AG, Luo GZ, Gong ZZ, Zhang JS, Chen SY (2005) Soybean DRE-binding transcription factors that are responsive to abiotic stresses. Theor Appl Genet 110:1355–1362PubMedCrossRefGoogle Scholar
- Li H, Yan S, Zhao L, Tan J, Zhang Q, Gao F, Wang P, Hou H, Li L (2014) Histone acetylation associated up-regulation of the cell wall related genes is involved in salt stress induced maize root swelling. BMC Plant Biol 14:105PubMedPubMedCentralCrossRefGoogle Scholar
- Li WW, Chen M, Zhong L, Liu JM, Xu ZS, Li LC, Zhou YB, Guo CH, Ma YZ (2015) Overexpression of the autophagy-related gene SiATG8a from foxtail millet (Setaria italica L.) confers tolerance to both nitrogen starvation and drought stress in Arabidopsis. Biochem Biophys Res Commun 468:800–806PubMedCrossRefGoogle Scholar
- Li N, Wang X, Ma B, Du C, Zheng L, Wang Y (2017) Expression of a Na+/H+ antiporter RtNHX1 from a recretohalophyte Reaumuria trigyna improved salt tolerance of transgenic Arabidopsis thaliana. J Plant Physiol 218:109–120PubMedCrossRefGoogle Scholar
- Lim GH, Zhang X, Chung MS, Lee DJ, Woo YM, Cheong HS, Kim CS (2010) A putative novel transcription factor, AtSKIP, is involved in abscisic acid signalling and confers salt and osmotic tolerance in Arabidopsis. New Phytol 185:103–113PubMedCrossRefGoogle Scholar
- Liu HC, Charng YY (2013) Common and distinct functions of Arabidopsis class A1 and A2 heat shock factors in diverse abiotic stress responses and development. Plant Physiol 163:276–290PubMedPubMedCentralCrossRefGoogle Scholar
- Liu Q, Kasuga M, Sakuma Y, Abe H, Miura S, Yamaguchi-Shinozaki K, Shinozaki K (1998) Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought-and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10:1391–1406PubMedPubMedCentralCrossRefGoogle Scholar
- Liu J, Ishitani M, Halfter U, Kim CS, Zhu JK (2000) The Arabidopsis thaliana SOS2 gene encodes a protein kinase that is required for salt tolerance. Proc Nat Acad Sci 97:3730–3734PubMedCrossRefGoogle Scholar
- Liu N, Zhong NQ, Wang GL, Li LJ, Liu XL, He YK, Xia GX (2007) Cloning and functional characterization of PpDBF1 gene encoding a DRE-binding transcription factor from Physcomitrella patens. Planta 226:827–838PubMedCrossRefGoogle Scholar
- Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin Y (2008) Identification of early senescence-associated genes in rice flag leaves. Plant Mol Biol 67:37–55PubMedCrossRefGoogle Scholar
- López-Pérez L, del Carmen Martínez-Ballesta M, Maurel C, Carvajal M (2009) Changes in plasma membrane lipids, aquaporins and proton pump of broccoli roots, as an adaptation mechanism to salinity. Phytochemistry 70:492–500PubMedCrossRefGoogle Scholar
- Luan S, Kudla J, Rodriguez-Concepcion M, Yalovsky S, Gruissem W (2002) Calmodulins and calcineurin B–like proteins: calcium sensors for specific signal response coupling in plants. Plant Cell 14:S389–S400PubMedPubMedCentralCrossRefGoogle Scholar
- Luo M, Liu X, Singh P, Cui Y, Zimmerli L, Wu K (2012) Chromatin modifications and remodeling in plant abiotic stress responses. Biochim Biophys Acta 1819:129–136PubMedCrossRefGoogle Scholar
- Ma S, Gong Q, Bohnert HJ (2006) Dissecting salt stress pathways. J Exp Bot 57:1097–1107PubMedCrossRefGoogle Scholar
- Mahajan S, Tuteja N (2005) Cold, salinity and drought stresses: an overview. Arch Biochem Biophys 444:139–158CrossRefGoogle Scholar
- Mahajan S, Pandey GK, Tuteja N (2008) Calcium-and salt-stress signaling in plants: shedding light on SOS pathway. Arch Biochem Biophys 471:146–158PubMedCrossRefGoogle Scholar
- Maischak H, Zimmermann MR, Felle HH, Boland W, Mithöfer A (2010) Alamethicin-induced electrical long distance signaling in plants. Plant Signal Behav 5:988–990PubMedPubMedCentralCrossRefGoogle Scholar
- Mantri NL, Ford R, Coram TE, Pang EC (2007) Transcriptional profiling of chickpea genes differentially regulated in response to high-salinity, cold and drought. BMC Genomics 8:303PubMedPubMedCentralCrossRefGoogle Scholar
- Mao C, Lu S, Lv B, Zhang B, Shen J, He J, Luo L, Xi D, Chen X, Ming F (2017) A rice NAC transcription factor promotes leaf senescence via ABA biosynthesis. Plant Physiol 174:1747–1763PubMedPubMedCentralCrossRefGoogle Scholar
- Mäser P, Eckelman B, Vaidyanathan R, Horie T, Fairbairn DJ, Kubo M, Yamagami M, Yamaguchi K, Nishimura M, Uozumi N, Robertson W, Sussman MR, Schroeder JI (2002) Altered shoot/root Na+ distribution and bifurcating salt sensitivity in Arabidopsis by genetic disruption of the Na+ transporter AtHKT1. FEBS Lett 531:157–161PubMedCrossRefGoogle Scholar
- Matsui A, Ishida J, Morosawa T, Mochizuki Y, Kaminuma E, Endo TA, Okamoto M, Nambara E, Nakajima M, Kawashima M, Satou M, Kim JM, Kobayashi N, Toyoda T, Shinozaki K, Seki M (2008) Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array. Plant Cell Physiol 49:1135–1149PubMedCrossRefGoogle Scholar
- Mazzucotelli E, Mastrangelo AM, Crosatti C, Guerra D, Stanca AM, Cattivelli L (2008) Abiotic stress response in plants: when post-transcriptional and post-translational regulations control transcription. Plant Sci 174:420–431CrossRefGoogle Scholar
- Mian A, Oomen RJ, Isayenkov S, Sentenac H, Maathuis FJ, Véry AA (2011) Over-expression of an Na+ -and K+ -permeable HKT transporter in barley improves salt tolerance. Plant J 68:468–479Google Scholar
- Milioni D, Hatzopoulos P (1997) Genomic organization of hsp90 gene family in Arabidopsis. Plant Mol Biol 35:955–961PubMedCrossRefGoogle Scholar
- Mirouze M, Paszkowski J (2011) Epigenetic contribution to stress adaptation in plants. Curr Opin Plant Biol 14:267–274PubMedCrossRefGoogle Scholar
- Mishra SK, Tripp J, Winkelhaus S, Tschiersch B, Theres K, Nover L, Scharf KD (2002) In the complex family of heat stress transcription factors, HsfA1 has a unique role as master regulator of thermotolerance in tomato. Genes Dev 16:1555–1567PubMedPubMedCentralCrossRefGoogle Scholar
- Mittler R, Vanderauwera S, Suzuki N, Miller G, Tognetti VB, Vandepoele K, Gollery M, Shulaev V, Breusegem FV (2011) ROS signaling: the new wave. Trends Plant Sci 16:300–309CrossRefGoogle Scholar
- Mizoi J, Shinozaki K, Yamaguchi-Shinozaki K (2012) AP2/ERF family transcription factors in plant abiotic stress responses. Biochim Biophys Acta 1819:86–96CrossRefGoogle Scholar
- Møller I, Gilliham M, Jha D, Mayo GM, Roy SJ, Coates JC, Haseloff J, Tester M (2009) Salinity tolerance engineered by cell type-specific over-expression of a Na+ transporter in the Arabidopsis root. Plant Cell 21:2163–2178PubMedPubMedCentralCrossRefGoogle Scholar
- Moore CA, Bowen HC, Scrase-Field S, Knight MR, White PJ (2002) The deposition of suberin lamellae determines the magnitude of cytosolic Ca2+ elevations in root endodermal cells subjected to cooling. Plant J 30:457–465PubMedCrossRefGoogle Scholar
- Morimoto RI, Kline MP, Bimston DN, Cotto JJ (1997) The heat-shock response: regulation and function of heat-shock proteins and molecular chaperones. Essays Biochem 32:17–29Google Scholar
- Mukherjee K, Choudhury AR, Gupta B, Gupta S, Sengupta DN (2006) An ABRE-binding factor, OSBZ8, is highly expressed in salt tolerant cultivars than in salt sensitive cultivars of indica rice. BMC Plant Biol 6:18PubMedPubMedCentralCrossRefGoogle Scholar
- Munné-Bosch S, Alegre L (2004) Die and let live: leaf senescence contributes to plant survival under drought stress. Funct Plant Biol 31:203–216CrossRefGoogle Scholar
- Munns R (2005) Genes and salt tolerance: bringing them together. New Phytol 167:645–663PubMedCrossRefGoogle Scholar
- Munns R, Tester M (2008) Mechanisms of salinity tolerance. Annu Rev Plant Biol 59:651–681PubMedCrossRefGoogle Scholar
- Munns R, James RA, Xu B, Athman A, Conn SJ, Jordans C, Byrt CS, Hare RA, Tyerman SD, Tester M, Plett D, Gilliham M (2012) Wheat grain yield on saline soils is improved by an ancestral Na+ transporter gene. Nat Biotechnol 30:360PubMedCrossRefGoogle Scholar
- Nakashima K, Tran LS, Van Nguyen D, Fujita M, Maruyama K, Todaka D, Ito Y, Hayashi N, Shinozaki K, Yamaguchi-Shinozaki K (2007) Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice. Plant J 51:617–630PubMedCrossRefGoogle Scholar
- Nations U (2013) World population prospects: the 2012 revision, highlights and advance tables, Working Paper No. ESA/P/WP. 228. United Nations Publications, New YorkGoogle Scholar
- Nishizawa A, Yabuta Y, Yoshida E, Maruta T, Yoshimura K, Shigeoka S (2006) Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress. Plant J 48:535–547PubMedCrossRefGoogle Scholar
- Nishizawa-Yokoi A, Nosaka R, Hayashi H, Tainaka H, Maruta T, Tamoi M, Ikeda M, Ohme-Takagi M, Yoshimura K, Yabuta Y, Shigeoka S (2011) HsfA1d and HsfA1e involved in the transcriptional regulation of HsfA2 function as key regulators for the Hsf signaling network in response to environmental stress. Plant Cell Physiol 52:933–945CrossRefGoogle Scholar
- Nover L, Bharti K, Döring P, Mishra SK, Ganguli A, Scharf K-D (2001) Arabidopsis and the heat stress transcription factor world: how many heat stress transcription factors do we need. Cell Stress Chaperones 6:177–189PubMedPubMedCentralCrossRefGoogle Scholar
- Ogawa D, Yamaguchi K, Nishiuchi T (2007) High-level overexpression of the Arabidopsis HsfA2 gene confers not only increased themotolerance but also salt/osmotic stress tolerance and enhanced callus growth. J Exp Bot 58:3373–3383CrossRefGoogle Scholar
- Oh D-H, Dassanayake M, Bohnert HJ, Cheeseman JM (2013) Life at the extreme: lessons from the genome. Genome Biol 13:241CrossRefGoogle Scholar
- Otegui MS, Noh YS, Martínez DE, Vila Petroff MG, Andrew Staehelin L, Amasino RM, Guiamet JJ (2005) Senescence-associated vacuoles with intense proteolytic activity develop in leaves of Arabidopsis and soybean. Plant J 41:831–844PubMedCrossRefGoogle Scholar
- Pardo JM, Rubio F (2011) Na+ and K+ transporters in plant signaling. In: Transporters and pumps in plant signaling. Springer, Berlin, pp 65–98CrossRefGoogle Scholar
- Parrott DL, McInnerney K, Feller U, Fischer AM (2007) Steam-girdling of barley (Hordeum vulgare) leaves leads to carbohydrate accumulation and accelerated leaf senescence, facilitating transcriptomic analysis of senescence-associated genes. New Phytol 176:56–69PubMedCrossRefGoogle Scholar
- Peleg Z, Apse MP, Blumwald E (2011) Engineering salinity and water-stress tolerance in crop plants: getting closer to the field. Adv Bot Res 57:405–443CrossRefGoogle Scholar
- Pérez-Salamó I, Papdi C, Rigó G, Zsigmond L, Vilela B, Lumbreras V, Nagy I, Horváth B, Domoki M, Darula Z, Medzihradszky K, Bögre L, Koncz C, Szabados L (2014) The heat shock factor A4A confers salt tolerance and is regulated by oxidative stress and the mitogen-activated protein kinases MPK3 and MPK6. Plant Physiol 165:319–334PubMedPubMedCentralCrossRefGoogle Scholar
- Perrella G, Lopez-Vernaza MA, Carr C, Sani E, Gosselé V, Verduyn C, Kellermeier F, Hannah MA, Amtmann A (2013) Histone deacetylase complex1 expression level titrates plant growth and abscisic acid sensitivity in Arabidopsis. Plant Cell 25:3491–3505PubMedPubMedCentralCrossRefGoogle Scholar
- Pokholok DK, Harbison CT, Levine S, Cole M, Hannett NM, Lee TI, Bell GW, Walker K, Rolfe PA, Herbolsheimer E, Zeitlinger J, Lewitter F, Gifford DK, Young RA (2005) Genome-wide map of nucleosome acetylation and methylation in yeast. Cell 122:517–527PubMedCrossRefGoogle Scholar
- Qin F, Kakimoto M, Sakuma Y, Maruyama K, Osakabe Y, Tran LS, Shinozaki K, Yamaguchi-Shinozaki K (2007) Regulation and functional analysis of ZmDREB2A in response to drought and heat stresses in Zea mays L. Plant J 50:54–69PubMedCrossRefGoogle Scholar
- Queitsch C, Hong SW, Vierling E, Lindquist S (2000) Heat shock protein 101 plays a crucial role in thermotolerance in Arabidopsis. Plant Cell 12:479–492PubMedPubMedCentralCrossRefGoogle Scholar
- Ray S, Mondal W, Choudhuri M (1983) Regulation of leaf senescence, grain-filling and yield of rice by kinetin and abscisic acid. Physiol Plant 59:343–346CrossRefGoogle Scholar
- Ren ZH, Gao JP, Li LG, Cai XL, Huang W, Chao DY, Zhu MZ, Wang ZY, Luan S, Lin HX (2005) A rice quantitative trait locus for salt tolerance encodes a sodium transporter. Nat Genet 37:1141PubMedCrossRefGoogle Scholar
- Ren G, An K, Liao Y, Zhou X, Cao Y, Zhao H, Ge X, Kuai B (2007) Identification of a novel chloroplast protein AtNYE1 regulating chlorophyll degradation during leaf senescence in Arabidopsis. Plant Physiol 144:1429–1441PubMedPubMedCentralCrossRefGoogle Scholar
- Roshandel P, Flowers T (2009) The ionic effects of NaCl on physiology and gene expression in rice genotypes differing in salt tolerance. Plant Soil 315:135–147CrossRefGoogle Scholar
- Roy SJ, Negrão S, Tester M (2014) Salt resistant crop plants. Curr Opin Biotechnol 26:115–124PubMedCrossRefGoogle Scholar
- RoyChoudhury A, Gupta B, Sengupta DN (2008) Trans-acting factor designated OSBZ8 interacts with both typical abscisic acid responsive elements as well as abscisic acid responsive element-like sequences in the vegetative tissues of indica rice cultivars. Plant Cell Rep 27:779–794PubMedCrossRefGoogle Scholar
- Rus A, Baxter I, Muthukumar B, Gustin J, Lahner B, Yakubova E, Salt DE (2006) Natural variants of AtHKT1 enhance Na+ accumulation in two wild populations of Arabidopsis. PLoS Genet 2:e210PubMedPubMedCentralCrossRefGoogle Scholar
- Sahi C, Singh A, Blumwald E, Grover A (2006) Beyond osmolytes and transporters: novel plant salt-stress tolerance-related genes from transcriptional profiling data. Physiol Plant 127:1–9CrossRefGoogle Scholar
- Sakuraba Y, Park SY, Kim YS, Wang SH, Yoo SC, Hörtensteiner S, Paek NC (2014) Arabidopsis STAY-GREEN2 is a negative regulator of chlorophyll degradation during leaf senescence. Mol Plant 7:1288–1302PubMedCrossRefGoogle Scholar
- Sani E, Herzyk P, Perrella G, Colot V, Amtmann A (2013) Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome. Genome Biol 14:R59PubMedPubMedCentralCrossRefGoogle Scholar
- Scandalios J (2005) Oxidative stress: molecular perception and transduction of signals triggering antioxidant gene defenses. Braz J Med Biol Res 38:995–1014PubMedCrossRefGoogle Scholar
- Scharf KD, Berberich T, Ebersberger I, Nover L (2012) The plant heat stress transcription factor (Hsf) family: structure, function and evolution. Biochim Biophys Acta 1819:104–119CrossRefGoogle Scholar
- Schmidt R, Mieulet D, Hubberten HM, Obata T, Hoefgen R, Fernie AR, Fisahn J, San Segundo B, Guiderdoni E, Schippers JH, Mueller-Roeber B (2013) Salt-responsive ERF1 regulates reactive oxygen species–dependent signaling during the initial response to salt stress in rice. Plant Cell 25:2115–2131PubMedPubMedCentralCrossRefGoogle Scholar
- Schroeder JI, Delhaize E, Frommer WB, Guerinot ML, Harrison MJ, Herrera-Estrella L, Horie T, Kochian LV, Munns R, Nishizawa NK, Tsay YF, Sanders D (2013) Using membrane transporters to improve crops for sustainable food production. Nature 497:60PubMedPubMedCentralCrossRefGoogle Scholar
- Serra TS, Figueiredo DD, Cordeiro AM, Almeida DM, Lourenço T, Abreu IA, Sebastián A, Fernandes L, Contreras-Moreira B, Oliveira MM, Saibo NJ (2013) OsRMC, a negative regulator of salt stress response in rice, is regulated by two AP2/ERF transcription factors. Plant Mol Biol 82:439–455PubMedCrossRefGoogle Scholar
- Shen YG, Zhang WK, He SJ, Zhang JS, Liu Q, Chen SY (2003) An EREBP/AP2-type protein in Triticum aestivum was a DRE-binding transcription factor induced by cold, dehydration and ABA stress. Theor Appl Genet 106:923–930PubMedCrossRefGoogle Scholar
- Shen J, Lv B, Luo L, He J, Mao C, Xi D, Ming F (2017) The NAC-type transcription factor OsNAC2 regulates ABA-dependent genes and abiotic stress tolerance in rice. Sci Rep 7:40641PubMedPubMedCentralCrossRefGoogle Scholar
- Sheveleva E, Chmara W, Bohnert HJ, Jensen RG (1997) Increased salt and drought tolerance by D-ononitol production in transgenic Nicotiana tabacum L. Plant Physiol 115:1211–1219PubMedPubMedCentralCrossRefGoogle Scholar
- Shi H, Ishitani M, Kim C, Zhu JK (2000) The Arabidopsis thaliana salt tolerance gene SOS1 encodes a putative Na+/H+ antiporter. Proc Nat Acad Sci 97:6896–6901PubMedCrossRefGoogle Scholar
- Shi H, Quintero FJ, Pardo JM, Zhu JK (2002) The putative plasma membrane Na+/H+ antiporter SOS1 controls long-distance Na+ transport in plants. Plant Cell 14:465–477PubMedPubMedCentralCrossRefGoogle Scholar
- Shi H, Lee BH, Wu SJ, Zhu JK (2003) Overexpression of a plasma membrane Na+/H+ antiporter gene improves salt tolerance in Arabidopsis thaliana. Nat Biotechnol 21:81PubMedCrossRefGoogle Scholar
- Sokol A, Kwiatkowska A, Jerzmanowski A, Prymakowska-Bosak M (2007) Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications. Planta 227:245–254PubMedCrossRefGoogle Scholar
- Song N-H, Ahn Y-J (2011) DcHsp17.7, a small heat shock protein in carrot, is tissue-specifically expressed under salt stress and confers tolerance to salinity. New Biotechnol 28:698–704CrossRefGoogle Scholar
- Song SY, Chen Y, Chen J, Dai X-Y, Zhang W-H (2011) Physiological mechanisms underlying OsNAC5-dependent tolerance of rice plants to abiotic stress. Planta 234:331–345CrossRefGoogle Scholar
- Song Y, Ji D, Li S, Wang P, Li Q, Xiang F (2012) The dynamic changes of DNA methylation and histone modifications of salt responsive transcription factor genes in soybean. PLoS One 7:e41274PubMedPubMedCentralCrossRefGoogle Scholar
- Su J, Wu R (2004) Stress-inducible synthesis of proline in transgenic rice confers faster growth under stress conditions than that with constitutive synthesis. Plant Sci 166:941–948CrossRefGoogle Scholar
- Suárez R, Calderón C, Iturriaga G (2009) Enhanced tolerance to multiple abiotic stresses in transgenic alfalfa accumulating trehalose. Crop Sci 49:1791–1799CrossRefGoogle Scholar
- Sunkar R, Bartels D, Kirch HH (2003) Overexpression of a stress-inducible aldehyde dehydrogenase gene from Arabidopsis thaliana in transgenic plants improves stress tolerance. PlJ 35:452–464Google Scholar
- Sunkar R, Li YF, Jagadeeswaran G (2012) Functions of microRNAs in plant stress responses. Trends Plant Sci 17:196–203PubMedCrossRefGoogle Scholar
- Suzuki K et al (2016) OsHKT1; 4-mediated Na+ transport in stems contributes to Na+ exclusion from leaf blades of rice at the reproductive growth stage upon salt stress. BMC Plant Biol 16:22PubMedPubMedCentralCrossRefGoogle Scholar
- Taiz L, Zeiger E (2010) Plant physiology, 5th edn. Sinauer Associates, SunderlandGoogle Scholar
- Tang M, Liu X, Deng H, Shen S (2011) Over-expression of JcDREB, a putative AP2/EREBP domain-containing transcription factor gene in woody biodiesel plant Jatropha curcas, enhances salt and freezing tolerance in transgenic Arabidopsis thaliana. Plant Sci 181:623–631PubMedCrossRefGoogle Scholar
- Tang T, Yu A, Li P, Yang H, Liu G, Liu L (2016) Sequence analysis of the Hsp70 family in moss and evaluation of their functions in abiotic stress responses. Sci Rep 6:33650PubMedPubMedCentralCrossRefGoogle Scholar
- Teakle NL, Tyerman SD (2010) Mechanisms of Cl-transport contributing to salt tolerance. Plant Cell Environ 33:566–589PubMedCrossRefGoogle Scholar
- Tester M, Davenport R (2003) Na+ tolerance and Na+ transport in higher plants. Ann Bot 91:503–527PubMedPubMedCentralCrossRefGoogle Scholar
- Thomas H, Ougham H (2014) The stay-green trait. J Environ Biol 65:3889–3900Google Scholar
- Tracy FE, Gilliham M, Dodd AN, Webb AA, Tester M (2008) NaCl-induced changes in cytosolic free Ca2+ in Arabidopsis thaliana are heterogeneous and modified by external ionic composition. Plant Cell Environ 31:1063–1073PubMedCrossRefGoogle Scholar
- Trivedi DK, Huda KM, Gill SS, Tuteja N (2016) Molecular chaperone: structure, function, and role in plant abiotic stress tolerance. In: Abiotic Stress Response in Plants. Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, pp 135–154CrossRefGoogle Scholar
- Tuteja N (2007) Mechanisms of high salinity tolerance in plants. Methods Enzymol 428:419–438PubMedCrossRefGoogle Scholar
- Vendruscolo ECG, Schuster I, Pileggi M, Scapim CA, Molinari HBC, Marur CJ, Vieira LGE (2007) Stress-induced synthesis of proline confers tolerance to water deficit in transgenic wheat. J Plant Physiol 164:1367–1376PubMedCrossRefGoogle Scholar
- Verslues PE (2016) ABA and cytokinins: challenge and opportunity for plant stress research. Plant Mol Biol 91:629–640PubMedCrossRefGoogle Scholar
- von Koskull-Döring P, Scharf K-D, Nover L (2007) The diversity of plant heat stress transcription factors. Trends Plant Sci 12:452–457CrossRefGoogle Scholar
- Wahid A, Gelani S, Ashraf M, Foolad MR (2007) Heat tolerance in plants: an overview. Environ Exp Bot 61:199–223CrossRefGoogle Scholar
- Wang S, Blumwald E (2014) Stress-induced chloroplast degradation in Arabidopsis is regulated via a process independent of autophagy and senescence-associated vacuoles. Plant Cell 26:4875–4888PubMedPubMedCentralCrossRefGoogle Scholar
- Wang W, Vinocur B, Shoseyov O, Altman A (2004) Role of plant heat-shock proteins and molecular chaperones in the abiotic stress response. Trends Plant Sci 9:244–252CrossRefGoogle Scholar
- Wang Q, Guan Y, Wu Y, Chen H, Chen F, Chu C (2008) Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice. Plant Mol Biol 67:589–602PubMedCrossRefGoogle Scholar
- Wang M et al (2014) Induced and constitutive DNA methylation in a salinity-tolerant wheat introgression line. Plant Cell Physiol 55:1354–1365PubMedCrossRefGoogle Scholar
- Wang W, Xu M, Wang G, Galili G (2017) Autophagy: an important biological process that protects plants from stressful environments. Front Plant Sci 7:2030PubMedPubMedCentralGoogle Scholar
- Wei Q et al (2017) A Wheat R2R3-type MYB transcription factor TaODORANT1 positively regulates drought and salt stress responses in transgenic tobacco plants. Front Plant Sci 8:1374PubMedPubMedCentralCrossRefGoogle Scholar
- Weinl S, Kudla J (2009) The CBL–CIPK Ca2+-decoding signaling network: function and perspectives. New Phytol 184:517–528PubMedCrossRefGoogle Scholar
- Winter D, Vinegar B, Nahal H, Ammar R, Wilson GV, Provart NJ (2007) An “Electronic Fluorescent Pictograph” browser for exploring and analyzing large-scale biological data sets. PLoS One 2:e718PubMedPubMedCentralCrossRefGoogle Scholar
- Woo HR, Kim HJ, Nam HG, Lim PO (2013) Plant leaf senescence and death–regulation by multiple layers of control and implications for aging in general. J Cell Sci 126:4823–4833PubMedCrossRefGoogle Scholar
- Xie Q, Michaeli S, Peled-Zehavi H, Galili G (2015) Chloroplast degradation: one organelle, multiple degradation pathways. Trends Plant Sci 20:264–265PubMedCrossRefGoogle Scholar
- Xiong L, Zhu JK (2002) Molecular and genetic aspects of plant responses to osmotic stress. Plant Cell Environ 25:131–139PubMedCrossRefGoogle Scholar
- Xiong Y, Contento AL, Bassham DC (2005) AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana. Plant J 42:535–546PubMedCrossRefGoogle Scholar
- Xue GP, Loveridge CW (2004) HvDRF1 is involved in abscisic acid-mediated gene regulation in barley and produces two forms of AP2 transcriptional activators, interacting preferably with a CT-rich element. Plant J 37:326–339PubMedCrossRefGoogle Scholar
- Xue ZY, Zhi DY, Xue GP, Zhang H, Zhao YX, Xia GM (2004) Enhanced salt tolerance of transgenic wheat (Tritivum aestivum L.) expressing a vacuolar Na+/H+ antiporter gene with improved grain yields in saline soils in the field and a reduced level of leaf Na+. Plant Sci 167:849–859CrossRefGoogle Scholar
- Xue S, Yao X, Luo W, Jha D, Tester M, Horie T, Schroeder JI (2011) AtHKT1; 1 mediates nernstian sodium channel transport properties in Arabidopsis root stelar cells. PLoS One 6:e24725PubMedPubMedCentralCrossRefGoogle Scholar
- Yamada A, Sekiguchi M, Mimura T, Ozeki Y (2002) The role of plant CCTα in salt-and osmotic-stress tolerance. Plant Cell Physiol 43:1043–1048PubMedCrossRefGoogle Scholar
- Yamaguchi-Shinozaki K, Shinozaki K (1994) A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. Plant Cell 6:251–264PubMedPubMedCentralGoogle Scholar
- Yamburenko MV, Zubo YO, Vanková R, Kusnetsov VV, Kulaeva ON, Börner T (2013) Abscisic acid represses the transcription of chloroplast genes. J Exp Bot 64:4491–4502PubMedPubMedCentralCrossRefGoogle Scholar
- Yang J, Zhang J, Wang Z, Zhu Q, Liu L (2003) Involvement of abscisic acid and cytokinins in the senescence and remobilization of carbon reserves in wheat subjected to water stress during grain filling. Plant Cell Environ 26:1621–1631CrossRefGoogle Scholar
- Yoshida T, Sakuma Y, Todaka D, Maruyama K, Qin F, Mizoi J, Kidokoro S, Fujita Y, Shinozaki K, Yamaguchi-Shinozaki K (2008) Functional analysis of an Arabidopsis heat-shock transcription factor HsfA3 in the transcriptional cascade downstream of the DREB2A stress-regulatory system. Biochem Biophys Res Commun 368:515–521PubMedCrossRefGoogle Scholar
- Yoshida T, Ohama N, Nakajima J, Kidokoro S, Mizoi J, Nakashima K, Maruyama K, Kim JM, Seki M, Todaka D, Osakabe Y, Sakuma Y, Schöffl F, Shinozaki K, Yamaguchi-Shinozaki K (2011) Arabidopsis HsfA1 transcription factors function as the main positive regulators in heat shock-responsive gene expression. Mol Genet Genomics 286:321–332PubMedCrossRefGoogle Scholar
- Zandalinas SI, Mittler R, Balfagón D, Arbona V, Gómez-Cadenas A (2018) Plant adaptations to the combination of drought and high temperatures. Physiol Plant 162:2–12CrossRefGoogle Scholar
- Zhai Y et al (2016) Autophagy, a conserved mechanism for protein degradation, responds to heat, and other abiotic stresses in Capsicum annuum L. Front Plant Sci 7:131PubMedPubMedCentralGoogle Scholar
- Zhang Z, Quick MK, Kanelakis KC, Gijzen M, Krishna P (2003) Characterization of a plant homolog of hop, a cochaperone of hsp90. Plant Physiol 131:525–535PubMedPubMedCentralCrossRefGoogle Scholar
- Zhang H, Li L, Ye T, Chen R, Gao X, Xu Z (2016) Molecular characterization, expression pattern and function analysis of the OsHSP90 family in rice. Biotechnol Biotechnol Equip 30:669–676CrossRefGoogle Scholar
- Zhu JK (2001) Plant salt tolerance. Trends Plant Sci 6:66–71PubMedCrossRefGoogle Scholar
- Zhu JK (2002) Salt and drought stress signal transduction in plants. Annu Rev Plant Biol 53:247–273PubMedPubMedCentralCrossRefGoogle Scholar
- Zhu JK (2003) Regulation of ion homeostasis under salt stress. Curr Opin Plant Biol 6:441–445PubMedCrossRefGoogle Scholar
- Zou J, Liu A, Chen X, Zhou X, Gao G, Wang W, Zhang X (2009) Expression analysis of nine rice heat shock protein genes under abiotic stresses and ABA treatment. J Plant Physiol 166:851–861PubMedCrossRefGoogle Scholar
- Zou J, Liu C, Liu A, Zou D, Chen X (2012) Overexpression of OsHsp17. 0 and OsHsp23. 7 enhances drought and salt tolerance in rice. J Plant Physiol 169:628–635PubMedCrossRefGoogle Scholar