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Visualization of Functional Structure and Kinetic Dynamics of Cellulases

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Glycobiophysics

Part of the book series: Advances in Experimental Medicine and Biology ((AEMB,volume 1104))

Abstract

Cellulose is the most abundant carbohydrate on earth and hydrolyzed by cellulases in nature. During catalysis, cellulase transfers protons to and from the oxygen atoms of the glycosidic bond and a water molecule. Since cellulose is an insoluble polymer, some kinds of cellulases, with high activity toward crystalline cellulose, move on the crystal surface with continuous hydrolysis of the molecular chain. In addition, binding and dissociation on/from the crystal surface are also important elementary steps of the reaction cycle. Recently, these interesting features of cellulases can be directly analyzed, due to the development of visualization techniques. In this chapter, we introduce (1) visualization of the protonation state of the catalytic residue by neutron crystallography, (2) visualization of processive movement on the crystal surface by high-speed atomic force microscopy , and (3) visualization of binding and dissociation events by single-molecule fluorescence microscopy.

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Acknowledgments

This study was supported by Grants-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports, Science, and Technology, Japan [grant numbers JP17K19213, JP16H00789, JP16H00858, and JP15H04366 to R. I., JP15H06898, JP17K18429, and JP17H05899 to A. N.], Advanced Technology Institute Research Grants 2015 (RG2709 to A.N.).

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Correspondence to Akihiko Nakamura .

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© 2018 Springer Nature Singapore Pte Ltd.

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Nakamura, A., Iino, R. (2018). Visualization of Functional Structure and Kinetic Dynamics of Cellulases. In: Yamaguchi, Y., Kato, K. (eds) Glycobiophysics. Advances in Experimental Medicine and Biology, vol 1104. Springer, Singapore. https://doi.org/10.1007/978-981-13-2158-0_10

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