Skip to main content

Mathematical Modeling of Rock Pore Geometry and Mineralization: Applications of Persistent Homology and Random Walk

  • Conference paper
  • First Online:
Agriculture as a Metaphor for Creativity in All Human Endeavors (FMfI 2016)

Part of the book series: Mathematics for Industry ((MFI,volume 28))

Included in the following conference series:

Abstract

Mathematical methods used to model heterogeneous pore geometry of natural rocks and their temporal evolution (mineralization processes) are explored. Recent development of X-ray microcomputed tomography enables high-resolution (micrometers) pore geometry of rock to be obtained. Nevertheless, exploring the complex spatial distribution of pore bodies, and relating this information to hydraulic and elastic properties, remains a challenge. In this study, persistent homology is first applied to describe heterogeneous rock pores, which captures the appearance and disappearance of topological features. The persistence diagram derived from this analysis shows the characteristic features of rock pore. Next, random walk is used to model rock mineralization processes. The results show that rock pore evolution is successfully modeled using random walk by defining the probability of mineral precipitation and dispersion degree in each grid cell of a modeled rock body. The mineralization parameter can be flexibly changed and a short computation time used when using random walk; this approach may thus be practical when simulating rock evolution processes such as long-term chemical reactions in a reservoir.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Cubical complex of Perseus software project Web page, http://www.sas.upenn.edu/vnanda/perseus/index.html

  2. H. Dong, M.J. Blunt, Pore-network extraction from micro-computerized-tomography images. Phys. Rev. E 80(3), 36307 (2009), https://doi.org/10.1103/PhysRevE.80.036307

  3. J. Dvorkin, A. Nur, H. Yin, Effective properties of cemented granular material. Mech. Mater. 18, 351–366 (1994)

    Article  Google Scholar 

  4. H. Edelsbrunner, J. Harer: Persistent homology—a survey, in Surveys on Discrete and Computational Geometry. Contemp. Math., Vol. 453 (Amer. Math. Soc., Providence, 2008), pp. 257–282

    Google Scholar 

  5. R.E. Ewing,The Mathematics of Reservoir Simulation, (SIAM, 1983)

    Google Scholar 

  6. R. Forman, Morse theory for cell complexes. Adv. Math. (N.Y) 134(1), 90–145 (1998), https://doi.org/10.1006/aima.1997.1650

  7. H. Huang, L. Wang, X.Y. Lu, Evaluation of three lattice Boltzmann models for multiphase flows in porous media. Comput. Math. Appl. 61(12), 3606–17 (2011), https://doi.org/10.1016/j.camwa.2010.06.034

  8. F. Jiang, T. Tsuji, Changes in pore geometry and relative permeability caused by carbonate precipitation in porous media. Phys. Rev. E 90, 053306 (2014), https://doi.org/10.1103/PhysRevE.90.053306

  9. F. Jiang, T. Tsuji, Estimation of three-phase relative permeability by simulating fluid dynamics directly on rock-microstructure images. Water Resour. Res. (2017), https://doi.org/10.1002/2016WR019098

  10. H. Kopp, N. Kukowski, Backstop geometry and accretionary mechanics of the Sunda margin. Tectonics 22(6), 1072 (2003), https://doi.org/10.1029/2002TC001420

  11. G.T. Kuster, M.N. Toksoz, Velocity and attenuation of seismic waves in two-phase media, part 1 theoretical formulations. Geophysics 39(5), 587–606 (1974), https://doi.org/10.1190/1.144050

  12. R. Lenormand, E. Touboul, C. Zarcone, Numerical models and experiments on immiscible displacements in porous media. J. Fluid Mech. 189(9), 165–187 (1988)

    Article  Google Scholar 

  13. G. Mavko, A. Nur, The effect of a percolation threshold in the Kozeny-Carman relation. Geophysics 62(5), 1480–1482 (1997), https://doi.org/10.1190/1.1444251

  14. G. McNamara, G. Zanetti, Use of the Boltzmann equation to simulate lattice-gas automata. Phys. Rev. Lett. 61, 2332 (1988), https://doi.org/10.1103/PhysRevLett.61.2332

  15. K. Mischaikow, V. Nanda, Morse theory for filtrations and efficient computation of persistent homology. Discret. Comput. Geometr. 50(2), 330–353 (2013)

    Article  MathSciNet  MATH  Google Scholar 

  16. PHAT (Persistent Homology Algorithm Toolbox), https://code.google.com/p/phat/

  17. P.M. Shearer, Cracked media, Poisson’s ratio and the structure of the upper oceanic crust. Geophys. J 92, 357–362 (1988)

    Article  Google Scholar 

  18. A.F.B. Tompson, L.W. Gelhar, Numerical simulation of solute transport in three-dimensional, randomly heterogeneous porous media. Water Resour. Res. 26(10), 2541–2562 (1990)

    Google Scholar 

  19. T. Tsuji, J. Ashi, M. Strasser, G. Kimura, Identification of the static backstop and its influence on the evolution of the accretionary prism in the Nankai Trough. Earth Planet. Sci. Lett. 431, 15–25 (2015), https://doi.org/10.1016/j.epsl.2015.09.011

  20. T. Tsuji, G.J. Iturrino, Velocity-porosity relationships of oceanic basalt from eastern flank of the Juan de Fuca ridge: the effect of crack closure on seismic velocity. Explor. Geophys. 39(1), 41–51 (2008), https://doi.org/10.1071/EG08001

  21. T. Tsuji, F. Jiang, K. Christensen, Characterization of immiscible fluid displacement processes with various capillary numbers and viscosity ratios in 3D natural sandstone. Adv. Water Resour. 95, 3–15 (2016), https://doi.org/10.1016/j.advwatres.2016.03.005

  22. H. Yamabe, T. Tsuji, Y. Liang, T. Matsuoka, Influence of fluid displacement patterns on seismic velocity during supercritical CO2 injection: simulation study for evaluation of the relationship between seismic velocity and CO2 saturation. Int. J. Greenh. Gas Control 46, 197–204 (2016), https://doi.org/10.1016/j.ijggc.2016.01.011

  23. S.-Y. Yoo, Y. Kuroda, Y. Mito, T. Matsuoka, M. Nakagawa, A. Ozawa, K. Sugiyama, A. Ueda, A geochemical clogging model with carbonate precipitation rates under hydrothermal conditions. Appl. Geochem. 30, 67–74 (2013)

    Article  Google Scholar 

  24. A. Zomorodian, G. Carlsson, Computing persistent homology. Discrete Comput. Geom. 33, 249–274 (2005)

    Article  MathSciNet  MATH  Google Scholar 

Download references

Acknowledgements

This research was improved by discussions in the Study Group Workshop in 2016 and is supported by a joint project between the International Institute for Carbon-Neutral Research (I2CNER) and Institute of Mathematics for Industry (IMI), Kyushu University. This work was partially supported by JSPS through a Grant-in-Aid for Science Research on Innovative Area (no.JP15H01143; JP17H05318). T.S. is partially supported by JSPS Grant-in-Aid (26610025, 26287019) and JST CREST Mathematics (15656429).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Takeshi Tsuji .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Nature Singapore Pte Ltd.

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Tsuji, T., Jiang, F., Suzuki, A., Shirai, T. (2018). Mathematical Modeling of Rock Pore Geometry and Mineralization: Applications of Persistent Homology and Random Walk. In: Anderssen, R., Broadbridge, P., Fukumoto, Y., Kajiwara, K., Simpson, M., Turner, I. (eds) Agriculture as a Metaphor for Creativity in All Human Endeavors. FMfI 2016. Mathematics for Industry, vol 28. Springer, Singapore. https://doi.org/10.1007/978-981-10-7811-8_11

Download citation

  • DOI: https://doi.org/10.1007/978-981-10-7811-8_11

  • Published:

  • Publisher Name: Springer, Singapore

  • Print ISBN: 978-981-10-7810-1

  • Online ISBN: 978-981-10-7811-8

  • eBook Packages: EngineeringEngineering (R0)

Publish with us

Policies and ethics