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Metagenomics of Plant Rhizosphere Microbiome

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Understanding Host-Microbiome Interactions - An Omics Approach

Abstract

The rhizosphere is a specific microbial habitat in the soil ecosystem. This is the area where soil swayed by plant roots through plant exudates deposition. Further, rhizosphere and root microbiota provide useful services to their host plant, such as protection from pathogen and enhanced mineral acquirement from nearby soil for plant growth. Microbial communities, usually, interact with each other and their host, so it is important to detain as much of the microbial diversity as possible. It requires the use of modern analytical tools such as metagenomics, which can reveal the functional potential of a rhizosphere microbiome.

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Acknowledgment

The work mentioned in this chapter from author group was supported by the National Bureau of Agriculturally Important Microorganisms; India (NBAIM/ICAR) grant to R.G.

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Authors and Affiliations

  1. Department of Agricultural Microbiology, College of Agriculture, Indira Gandhi Krishi Vishva Vidyalaya, Raipur, Chhattisgarh, India

    Ravindra Soni

  2. ICAR-National Institute of Biotic Stress Management, Baronda, Chhattisgarh, India

    Vinay Kumar & Lata Jain

  3. Department of Microbiology, CBSH, G.B.Pant University of Agriculture and Technology, Pantnagar, 263145, Uttaranchal, India

    Deep Chandra Suyal & Reeta Goel

Authors
  1. Ravindra Soni
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  2. Vinay Kumar
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  3. Deep Chandra Suyal
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  4. Lata Jain
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  5. Reeta Goel
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Correspondence to Reeta Goel .

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Editors and Affiliations

  1. Saurashtra University, UGC-CAS Department of Biosciences Saurashtra University, Rajkot, Gujarat, India

    Ravindra Pal Singh

  2. Saurashtra University, UGC-CAS Department of Biosciences Saurashtra University, Rajkot, Gujarat, India

    Ramesh Kothari

  3. Anand Agricultural University, College of Vet. Sc. & Animal Husbandry Anand Agricultural University, Anand, Gujarat, India

    Prakash G. Koringa

  4. Saurashtra University, UGC-CAS Department of Biosciences Saurashtra University, Rajkot, Gujarat, India

    Satya Prakash Singh

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Soni, R., Kumar, V., Suyal, D.C., Jain, L., Goel, R. (2017). Metagenomics of Plant Rhizosphere Microbiome. In: Singh, R., Kothari, R., Koringa, P., Singh, S. (eds) Understanding Host-Microbiome Interactions - An Omics Approach. Springer, Singapore. https://doi.org/10.1007/978-981-10-5050-3_12

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