Abstract
This chapter analyses the bioinformatics revolution and its implications for conservation and wildlife management. Bioinformatics refers to the hardware and software that stores and analyzes the massive amount of data being generated by molecular biology today. The growth of the bioinformatics industry reflects the explosion in genomic data available to researchers in the post-Human Genome Research Project era, the steep decline in the cost of gene sequencing since the 1990s, and the recent prioritization of genomic analysis in medicine and forensics. Bioinformatics is the crucial technological scaffolding for a newly molecularized nature in which surveillance and manipulation at the genetic level begins to displace species or habitat-level interventions. This chapter begins with a discussion of bioinformatics and the twin dynamics of the digitization and molecularization of life. It then analyses the political discourse used to promote the Encyclopedia of Life before moving to an in-depth evaluation of the controversies surrounding DNA barcoding. The chapter concludes by reflecting upon digital nature, this new media space in which everything will be counted but there may be no wilderness left to enjoy.
All we have yet discovered is but a trifle in comparison with what lies hid in the great treasury of nature.
Antoni van Leeuwenhoek (1708)
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Benson ES (2008) The wired wilderness: electronic surveillance and environmental values in wildlife biology. Dissertation, Massachusetts Institute of Technology
Blaustein R (2009) The Encyclopedia of Life: Describing species, unifying biology. BioScience 59(7):551-556
Bocking S (2004) Nature’s experts: science, politics and the environment. Rutgers University Press, New Brunswick
Braun B (2007) Biopolitics and the molecularization of life. Cult Geogr 14:6–28
Caddy-Retalic S, Lowe A (2012) DNA barcoding: a better way to discover species. The Conversation, 5 March. http://theconversation.com/dna-barcoding-a-better-way-to-discover-species-4933. Accessed 20 April 2014
Cameron S, Rubinoff D, Will K (2006) Who will actually use DNA barcoding and how much will it cost. Syst Biol 55(5):844–847
Costa FO, Carvalho GR (2007) The barcode of life initiative: synopsis and prospective societal impacts of DNA barcoding of fish. Genomics Soc Policy 3(2):29–40
Cotterill FPD (1995) The second Alexandrian tragedy, and the fundamental relationship between biological collections and scientific knowledge. The value and valuation of natural science collections. Proceedings of the International Conference, edited by J. R. Nudds and C. W. Pettitt, The Geological Society of London, Manchester
Cotterill FPD, Foissner W (2010) A pervasive denigration of natural history misconstrues how biodiversity inventories and taxonomy underpin scientific knowledge. Biodivers Conserv 19:291–303
Deese RS (2009) The artifact of nature: ‘spaceship earth’ and the dawn of global environmentalism. Endeavour 33(2):70–75
DeSalle R, Birstein VJ (1996) PCR identification of black caviar. Nature 381:197–198
DeSalle R, Amato G (2009) The expansion of conservation genetics. In: Amato G, DeSalle R, Ryder OA, Rosenbaum HC (eds) Conservation genetics in the age of genomics. Columbia University Press, New York, pp 3–23
Eckholm E (1986) Species are lost before they’re found. The New York Times, 16 Sept.:C1, C5
Ellis R, Waterton C (2004) Environmental citizenship in the making: the participation of volunteer naturalists in UK biological recording and biodiversity policy. Sci Public Pol 31(2):95–105
Encyclopedia of Life (2009) Imagine a website for every species: Annual Report 2008-2009. Available from http://eol.org/files/pdfs/press/EOL_Annual_Report_2009.pdf. Accessed 2 September 2014
Flitner M, Heins V (2002) Modernity and life politics: conceptualizing the biodiversity crisis. Polit Geogr 21:319–340
Gieryn TF (1983) Boundary-work and the demarcation of science from non-science: strains and interests in professional ideologies of scientists. Am Sociol Rev 48(6):781–795
Haraway DJ (1992) Primate visions: gender, race and nature in the world of modern science. Verso Books, Brooklyn
Hebert PDN, Gregory TR (2005) The promise of DNA barcoding for taxonomy. Syst Biol 54(5):852–859
Hebert PDN, Cywinska A, Ball SL, deWaard JR (2003) Biological identifications through DNA barcodes. Proceedings of the Royal Society of London B 270:313–321
Hellsten I (2002) The politics of metaphor: biotechnology and biodiversity in the media. Dissertation, University of Tampere. http://tampub.uta.fi/bitstream/handle/10024/67206/951-44-5380-8.pdf?sequence=1. Accessed 6 May 2014
Hills A, Rosenfeld A (1963) Nearer now! Control of aging and heredity. Life Int 35(9):45–50
Kelly K (2000) All species inventory. Whole Earth Catalog 102:4-10
Kirsch A (2014) Technology is taking over English departments. New Republic, 2 May. http://www.newrepublic.com/article/117428/limits-digital-humanities-adam-kirsch. Accessed 11 May 2014
Knudsen S (2005) Communicating novel and conventional scientific metaphors: a study of the development of the metaphor of genetic code. Public Underst Sci 14:373–392
Kress WJ (2010) Interview with Amy L. Fletcher, Smithsonian Institute, National Museum of Natural History, Washington, D.C., 22 January 2010
Kress WJ, Erickson DL (2008) DNA barcodes: genes, genomics and bioinformatics. PNAS 105(8):2761–2762
Kroker A, Kroker M (2010) Code drift: essays in critical digital studies. Ctheory.net. http://www.ctheory.net/articles.aspx?id=633. Accessed 7 May 2014
Kumar S (2005) Bioinformatics web. http://bioinformaticsweb.net/. Accessed 5 May 2014
LANHM (2012) Commemorative exhibit for Ralph W. Schreiber, Hall of Birds. Visited by Amy L. Fletcher in May 2012
Life International (1963) DNA’s code: key to all life. Life Int 35(9):38–43
Lloyd C (2010) Leave the extinctions to Mother Nature, not the Red List. The Telegraph 29 September. http://www.telegraph.co.uk/earth/wildlife/8032917/Leave-the-extinctions-to-Mother-Nature-not-the-Red-List.html Accessed 2 September 2014
McGregor A (2004) Sustainable development and warm fuzzy feelings: discourse and nature within Australian environmental imaginaries. Geoforum 25:593–606
Mitchell WJT (2003) The work of art in the age of biocybernetic reproduction. Modernism/Modernity 10(3):481–500
Mitman G (1996) When nature is the zoo: vision and power in the art and science of natural history. Osiris 11:117–143
National Audubon Society (2014) About the Christmas bird count. http://birds.audubon.org/about-christmas-bird-count. Accessed 2 September 2014
National General Medical Sciences (2010) Glossary: the new genetics. Bethesda. http://publications.nigms.nih.gov/thenewgenetics/glossary.html. Accessed 6 May 2014
National Human Genome Research Institute (2014) DNA sequencing costs. Bethesda. http://www.genome.gov/sequencingcosts/. Accessed 17 April 2014
Nelkin D (2001) Molecular metaphors: the gene in popular discourse. Nat Rev Genet 2:555–559
Nobelprize.org (2014) http://www.nobelprize.org/nobel_prizes/medicine/laureates/1962/. Accessed 2 September 2014
Roberts D (2011) Fatal invention: how science, politics and big business re-create race in the twenty-first century. The New Press, New York
Rose N (2001) The politics of life itself. Theory Cult Soc 18:1–30
Rose N (2007) Molecular biopolitics, somatic ethics, and the spirit of biocapital. Soc Theor Health 5:3–29
Royal Ontario Museum (2009) Canadian Barcode of Life initiative. http://www.rom.on.ca/en/collections-research/research/natural-history/canadian-barcode-life-initiative. Accessed 7 May 2014
Rubinoff D (2006) DNA barcoding evolves into the familiar. Conserv Biol 20(5):1548–1549
Schermer M (2009) They could have used a robot: technology, nature, experience and human flourishing. In: Drenthen MA, Keulartz FWJ, Proctor J (eds) New visions of nature: complexity and authenticity. Springer Science and Business Media, Dordrecht, pp 41–46
Schrodinger E (1944) What is life. http://whatislife.stanford.edu/LoCo_files/What-is-Life.pdf. Accessed 20 April 2014
Schulman AN (2011) GPS and the end of the road. The New Atlantis Spring:4–32. http://www.thenewatlantis.com/publications/gps-and-the-end-of-the-road. Accessed 11 May 2014
Schulz K (2010) Interview with Amy L. Fletcher, Smithsonian Institute, National Museum of Natural History, Washington, D.C., 22 January 2010
Steinke D (2013) Ten years of DNA barcoding. Barcode Bull 4(2):2–3. http://ibol.org/wp-content/uploads/2013/12/iBOL-Barcode-Bulletin-Dec-2013.pdf. Accessed 7 May 2014
Wade N (2004) A species in second. The New York Times. 14 Dec. http://www.nytimes.com/2004/12/14/science/14barcode.html?_r=0. Accessed 20 April 2014
Waldby C (2002) Stem cells, tissue cultures and the production of biovalue. Health 6(3):305–323
Weight L (2010) Interview with Amy L. Fletcher, Smithsonian Institute, National Museum of Natural History, Washington, D.C., 22 January 2010
Wente M (2008) Canada’s marvelous library of life. The globe and mail, 13 Dec: A25
Wilson EO (2003) The encyclopedia of life. Trends Ecol Evol 18(2):77–80
Wilson E O (2004) Taxonomy as a fundamental discipline. Phil Trans R Soc Lond Soc. B 359(1444):739
Wilson EO (2007) My wish: build the encyclopedia of life. Speech delivered at TED2007, Vancouver, March. http://www.ted.com/talks/e_o_wilson_on_saving_life_on_earth. Accessed 6 May 2014
Witcher T (2010) Update on the Smokies all-taxa biodiversity inventory. Presentation at Wilderness Wildlife Week, Pigeon Forge, 3 Feb
Young P (1991) The library of life. The Sunday mail, 24 March
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
Copyright information
© 2014 Springer Science+Business Media B.V.
About this chapter
Cite this chapter
Fletcher, A. (2014). Bio-Inventories: The Digitization of Nature. In: Mendel's Ark. Springer, Dordrecht. https://doi.org/10.1007/978-94-017-9121-2_3
Download citation
DOI: https://doi.org/10.1007/978-94-017-9121-2_3
Published:
Publisher Name: Springer, Dordrecht
Print ISBN: 978-94-017-9120-5
Online ISBN: 978-94-017-9121-2
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)