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Molecular Markers of Phytoplankton Physiological Status and Their Application at the Level of Individual Cells

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Molecular Approaches to the Study of the Ocean

Abstract

Three of the basic questions in biological oceanography are ‘What limits primary production?’, ‘What is the fate of organic material produced by phytoplankton?’, and ‘Why are there so many species of plankton?’. These questions can be asked separately — the last question for example was framed elegantly in Hutchinson’s classic paper (Hutchinson, 1961) — but all three are clearly interrelated. Different phytoplankton species have been shown to have different requirements for optimal growth and different physiological mechanisms for responding to limiting conditions. Thus the answer to the first question may be dependent on the species present, and the number of phytoplankton species may be dependent on the number and types of limits on phytoplankton growth. The fate of the organic material of cells is often dependent on cell size, shape and density, characteristics of individual phytoplankton species. All these differences result in well-described, although not necessarily mechanistically understood, successional cycles (Smayda, 1980) and are likely to generate considerable heterogeneity of physiological conditions among the members of all phytoplankton communities. In this chapter, we review some of the evidence that species composition among the phytoplankton influences ecosystem structure and function. We then examine ways that molecular biology and advances in single cell analysis can be used to understand the factors influencing primary production and material flux at the level of individual species and taxa.

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References

  • Ahner, B.A. and Morel, F.M.M. (1995) Phytochelatin production in marine algae. 2. Induction by various metals. Limnology and Oceanography, 40,658–65.

    CAS  Google Scholar 

  • Ahner, B.A., Price, N.M. and Morel, F.M.M. (1994) Phytochelatin production by marine phytoplankton at low free metal ion concentrations: Laboratory studies and field data from Massachusetts Bay. Proceedings of the National Academy of Sciences of the USA, 91,8433–6.

    PubMed  CAS  Google Scholar 

  • Ahner, B.A., Kong, S. and Morel, F.M.M. (1995) Phytochelatin production in marine algae. 1. An interspecies comparison. Limnology and Oceanography, 40,649–57.

    CAS  Google Scholar 

  • Andreae, M.O. (1986) The ocean as a source of atmospheric sulfur compounds, in The Role of Air-Sea Exchange in Geochemical Cycling (ed. P. Baut-Menard), Reidel, Dordrecht, pp. 331–62.

    Google Scholar 

  • Antia, N.J., Harrison, P.J. and Oliveira, L. (1991) The role of dissolved organic nitrogen in phytoplankton nutrition, cell biology and ecology. Phycologia, 30,1–89.

    Google Scholar 

  • Applemans, N. (1994) Sites of particle selection determined from observations of individual feeding larvae of the sand dollar Dendraster excentricus. Limnology and Oceanography, 39, 404–11.

    Google Scholar 

  • Balch, W.M., Holligan, P.M., Ackleson, S.G. et al. (1991) Biological and optical properties of mesoscale coccolithophore blooms in the Gulf of Maine. Limnology and Oceanography, 36, 629–43.

    CAS  Google Scholar 

  • Bates, S.S., Freitas, A.S.W., Milley, J.E. et al. (1991) Controls of domoic add production by the diatom Nitzschia pungens f. multiseries in culture: nutrients and irradiance. Canadian Journal of Fisheries and Aquatic Sciences, 48, 1136–44.

    CAS  Google Scholar 

  • Bentley-Mowat, J.A. (1982) Application of fluorescence microscopy to pollution studies on marine phytoplankton. Botannica Marina, 25, 20–4.

    Google Scholar 

  • Berges, J.A. and Falkowski, P.G. (1996) Cell-assod-ated proteolytic enzymes from marine phytoplankton. Journal of Phycology, 32,566–74.

    CAS  Google Scholar 

  • Bienfang, P.K. and Harrison, PJ. (1984) Sinking rate response of natural assemblages of temperate and subtropical phytoplankton to nutrient depletion. Marine Biology, 83,293–300.

    Google Scholar 

  • Bienfang, P.K., Harrison, PJ. and Quarmby, L.M. (1982) Sinking rate responses to depletion of nitrate, phosphate and silicate in four marine diatoms. Marine Biology, 67,295–302.

    CAS  Google Scholar 

  • Brand, L.E., Guillard, R.R.L. and Murphy, L.S. (1981) A method for the rapid and precise determination of acclimated phytoplankton reproduction rates. Journal of Plankton Research, 3, 193–201.

    Google Scholar 

  • Brown, L.N., Robinson, M.G. and Hall, B.D. (1988) Mechanisms for copper tolerance in Amphora coffeaeformis-internal and external binding. Marine Biology, 97,581–6.

    CAS  Google Scholar 

  • Buma, A.G.J., Van Hannen, E.J., Roza, L. et al. (1995) Monitoring ultraviolet-B-induced DNA damage in individual diatom cells by immuno-fluorescent thymine dimer detection. Journal of Phycology, 31, 314–21.

    CAS  Google Scholar 

  • Bunya, M., Nishirmura, M., Harashima, S. et at. (1991) The PHO84 gene of Saccharomyces cere-visiae encodes an inorganic phosphate transporter. Molecular and Cellular Biology, 11, 3229–38.

    CAS  Google Scholar 

  • Butler, M. and Dam, H.G. (1994) Production rates and characteristics of fecal pellets of the copepod Acartia tonsa under simulated phytoplankton bloom conditions: implications for vertical fluxes. Marine Ecology Progress Series, 114,81–91.

    Google Scholar 

  • Caron, D.A., Lim, E.L., Miceli, G. et al. (1991) Grazing and utilization of chroococcoid cyanobacteria and heterotrophic bacteria by protozoa in laboratory cultures and a coastal phytoplankton community. Marine Ecology Progress Series, 76, 205–17.

    Google Scholar 

  • Carreto, J.I., Carignan, M.O., Daleo, G. et al. (1990) Occurrence of mycosporine-like amino adds in the red tide dinoflagellate Alexandrium excavatum: UV-photoprotective compounds. Journal of Plankton Research, 12, 909–21.

    CAS  Google Scholar 

  • Cembella, A.D., Antia, N.J. and Harrison, P.J. (1984) The utilization of inorganic and organic phosphorus compounds as nutrients by eukaryotic microalgae: A multidisdplinary perspective: Part I. CRC Critical Reviews in Microbiology, 10,317–91.

    PubMed  CAS  Google Scholar 

  • Cervantes, C. and Gutierrezcorona, F. (1994) Copper resistance mechanisms in bacteria and fungi. FEMS Microbiology Renews, 14, 121–37.

    CAS  Google Scholar 

  • Cha, J.S. and Cooksey, D.A. (1991) Copper resistance in Pseudomonas syringae mediated by periplasmic and outer membrane proteins. Proceedings of the National Academy of Sciences of the USA, 88, 8915–19.

    PubMed  CAS  Google Scholar 

  • Cooksey, D.A. (1993) Copper uptake and resistance in bacteria. Molecular Microbiology, 7,1–5.

    PubMed  CAS  Google Scholar 

  • Cooksey, D.A. (1994) Molecular mechanisms of copper resistance and accumulation in bacteria. FEMS Microbiology Reviews, 14, 381–6.

    PubMed  CAS  Google Scholar 

  • Cooksey, K.E., Guckert, J.B., Williams, S.A. et al. (1987) Fluorometric determination of the neutral lipid content of microalgal cells using Nile Red. Journal of Microbiological Methods, 6, 333–45.

    CAS  Google Scholar 

  • Cucci, T.L., Shumway, S.E., Newell, R.C. et al. (1985) Flow cytometry: a new method for characterization of differential ingestion, digestion, and egestion by suspension feeders. Marine Ecology Progress Series, 24,201–4.

    Google Scholar 

  • Cullen, J.J., Yang, X. and MacIntyre, H.L. (1992) Nutrient limitation of marine photosynthesis, in Primary Productivity and Biogeochemical Cycles in the Sea (eds P. Falkowski and A. Woodhead), Plenum Press, New York, pp. 69–88.

    Google Scholar 

  • Delaunay, F., Marty, Y., Moal, J. et al. (1993) The effect of monospecific algal diets on growth and fatty acid composition of Pecten maximus (L.) larvae. Journal of Experimental Marine Biology and Ecology, 173, 163–79.

    CAS  Google Scholar 

  • Dolan, J.R., Thingstad, T.F. and Rassoulzadegan, F. (1995) Phosphate transfer between microbial size-fractions in Villefranche Bay (NW Mediterranean Sea), France in Autumn 1992. Ophelia, 41, 71–85.

    Google Scholar 

  • Dorsey, J., Yentsch, C.M., Mayo, S. et al. (1989) Rapid analytical technique for the assessment of cell metabolic activity in marine microalgae. Cytometry, 10, 622–8.

    PubMed  CAS  Google Scholar 

  • Dorteh, Q., Clayton, J.R., Toresen, S.S. et al. (1985) Nitrogen storage and use of biochemical indices to assess nitrogen deficiency and growth rate in natural plankton populations. Journal of Marine Research, 43, 437–64.

    Google Scholar 

  • Dyhrman, S. and Palenik, B. (1997) The identification and purification of a cell-surface alkaline phosphatase from the dinoflagellate Prorocentrum minimum (Dinophyceae). Journal of Phycology, 33, 602–12.

    CAS  Google Scholar 

  • Eppley, R.W. (1981) Relations between nutrient assimilation and growth in phytoplankton with a brief review of estimates of growth rates in the ocean, in Physiological Bases of Phytoplankton Ecology (ed. T. Platt), Canadian Department of Fisheries and Oceans, Ottawa, pp. 251–63.

    Google Scholar 

  • Falkowski, P.G. (1995) Towards understanding the molecular ecology of phytoplankton photosynthesis, in Molecular Ecology of Aquatic Microbes (ed. I. Joint), Springer-Verlag, Berlin, pp. 17–38.

    Google Scholar 

  • Falkowski, P.G., Greene, R.M. and Geider, R.J. (1992) Physiological limitations on phytoplankton productivity in the ocean. Oceanography, 5, 84–91.

    Google Scholar 

  • Fisher, N.S. and Schwarzenbach, R.P. (1978) Fatty acid dynamics in Thalassiosira pseudonana (Bacllariophyceae): Implications for physiological ecology. Journal of Phycology, 14, 143–60.

    CAS  Google Scholar 

  • Flynn, K.J. (1990) The determination of nitrogen status in microalgae. Marine Ecology Progress Series, 61, 297–307.

    CAS  Google Scholar 

  • Flynn, K.J., Oepik, H. and Syrett, P.J. (1986) Localization of the alkaline phosphatase and 5′-nucleotidase activities of the diatom Phaeodactylum tricornutum. Journal of General Microbiology, 132, 289–98.

    CAS  Google Scholar 

  • Flynn, K.J., Dickson, D.M.J. and Al-Amoudi, O.A. (1989) The ratio of glutamate-.glutamine in microalgae: a biomarker for N-status suitable for use at natural cell densities. Journal of Plankton Research, 11, 165–70.

    CAS  Google Scholar 

  • Fogel, S. and Welch, J.W. (1982) Tandem gene amplification mediates copper resistance in yeast. Proceedings of the National Academy of Sciences of the USA, 79, 5342–6.

    PubMed  CAS  Google Scholar 

  • Fritz, L., Quilham, M.A., Wright, J.L.C. et al. (1992) An outbreak of domoic acid poisoning attributed to the pennate diatom, Pseudonitzschia australis. Journal of Phycology, 28, 439–42.

    Google Scholar 

  • Gareiapichel, F. and Castenholz, R.W. (1993) Occurrence of UV-absorbing, mycosporine-like compounds among cyanobacterial isolates and an estimate of their screening capacity. Applied and Environmental Microbiology, 59,163–9.

    Google Scholar 

  • Garrison, D.L., Conrad, S.M., Eiles, P.P. et al. (1992) Confirmation of domoic acid production by Pseudonitzschia australis (Badllariophyceae) in culture. Journal of Phycology, 28, 604–7.

    CAS  Google Scholar 

  • Geider, R.J., LaRoche, J., Greene, R.M. et al. (1993) Response of the photosynthetic apparatus of Phaeodactylum tricornutum (Badllariophyceae) to nitrate, phosphate, or iron starvation. Journal of Phycology, 29, 755–66.

    CAS  Google Scholar 

  • Gekeler, W., Grill, E., Winnacker, E. et al. (1988) Algae sequester heavy metals via synthesis of phytochelatin complexes. Archives of Microbiology, 150, 197–202.

    CAS  Google Scholar 

  • Graziano, L.M., La Roche, J. and Geider, R.J. (1996) Physiological responses to phosphorus limitation in batch and steady-state cultures of Dunaliella tertiolecta (Chlorophyta): A unique stress protein as an indicator of phosphate deficiency. Journal of Phycology, 32, 825–38.

    CAS  Google Scholar 

  • Greene, R.M., Geider, R.J. and Falkowski, P.G. (1991) Effect of iron limitation on photosynthesis in a marine diatom. Limnology and Oceanography, 36, 1772–82.

    CAS  Google Scholar 

  • Grill, E., Loeffler, S., Wimmacker, E. et al. (1989) Phytochelatins, the heavy-metal-binding peptides of plants, are synthesized from glutathione by a specific γ-glutamylcysteine dipeptide transpeptidase (phytochelatin synthase). Proceedings of the National Academy of Sciences of the USA, 86, 6838–42.

    PubMed  CAS  Google Scholar 

  • Groene, T. and Kirst, G.O. (1992) The effect of nitrogen deficiency, methionine and inhibitors of methionine metabolism on the DMSP contents of Tetraselmis subcordiformis (Stein). Marine Biology, 112, 497–503.

    CAS  Google Scholar 

  • Grossman, A.R., Schaefer, M.R., Chiang, G.G. et al. (1993) The phycobilisome, a light-harvesting complex responsive to environmental conditions. Microbiological Reviews, 57, 725–49.

    PubMed  CAS  Google Scholar 

  • Guillard, R.R.L. (1975) Culture of phytoplankton for feeding marine invertebrates, in Culture of Marine Invertebrate Animals (eds W.L. Smith and M.H. Chanley), Plenum Press, New York, pp. 29–60.

    Google Scholar 

  • Gupta, A., Whitton, B.A., Morby, A.P. et al. (1992) Amplification and rearrangement of a prokaryotic metallothionein locus SMT in Synechococcus PCC-6301 selected for tolerance to cadmium. Proceedings of the Royal Society of London Series B — Biological Sciences, 248, 273–81.

    CAS  Google Scholar 

  • Hansen, F.C., Witte, H.J. and Passarge, J. (1996) Grazing in the heterotrophic dinoflagellate Oxyrrhis marina: size selectivity and preference for calcified Emiliania huxleyi cells. Aquatic Microbial Ecology, 10, 307–13.

    Google Scholar 

  • Harris, E.H. (1989) The Cnlamtydamonas Sourcebook, Academic Press, San Diego.

    Google Scholar 

  • Harris, G.P. (1986) Phytoplankton Ecology, Chapman & Hall, New York.

    Google Scholar 

  • Harrison, G. and Morel, F.M.M. (1986) Response of the marine diatom Thalassiosira weissflogii to iron stress. Limnology and Oceanography, 31, 989–97.

    CAS  Google Scholar 

  • Hildebrand, M., Higgins, D.R., Busser, K. et al. (1993) Silicon-responsive cDNA clones isolated from the marine diatom Cylindrotheca fusiformis. Gene, 132, 213–18.

    PubMed  CAS  Google Scholar 

  • Hudson, R.J.M. and Morel, F.M.M. (1990) Iron transport in marine phytoplankton: Kinetics of cellular and medium coordination reactions. Limnology and Oceanography, 35, 1002–20.

    CAS  Google Scholar 

  • Hutber, G.N., Hutson, K.G. and Rogers, L.J. (1977) Effect of iron deficiency on levels of two ferredoxins and flavodoxin in a cyanobacterium, FEMS Microbiology Letters, 1, 193–6.

    CAS  Google Scholar 

  • Hutchinson, G.E. (1961) The paradox of the plankton. American Naturalist, 95, 137–45.

    Google Scholar 

  • Ianora, A. and Poulet, S.A. (1993) Egg viability in the copepod Temora stylifera. Limnology and Oceanography, 38, 1615–26.

    Google Scholar 

  • Jannasch, H.W. (1974) Steady state and the chemostat in ecology. Limnology and Oceanography, 19, 716–20.

    Google Scholar 

  • Jannasch, H.W. and Mateles, R.I. (1974) Experimental bacterial ecology studied in continuous culture, in Advances in Microbial Physiology (eds A.H. Rose and D.W. Tempest), Academic Press, London, pp. 165–212.

    Google Scholar 

  • Jeanjean, R., Bedu, S., Niewenhurs, B.J.W.M. et al. (1986) Immunological evidence for the involvement of cell wall proteins in phosphate uptake in the yeast Saccharomyces cerevisiae. Archives of Microbiology, 144,207–12.

    PubMed  CAS  Google Scholar 

  • Kaplan, A., Schwarz, R., Liemanhurwitz, J. et al. (1991) Physiological and molecular aspects of the inorganic concentrating mechanism in cyanobacteria. Plant Physiology, 97, 851–5.

    PubMed  CAS  Google Scholar 

  • Karin, M., Najarian, R., Haslinger, A. et al. (1984) Primary structure and transcription of an amplified genetic locus: the CUPl locus of yeast. Proceedings of the National Academy of Sciences of the USA, 81, 337–41.

    PubMed  CAS  Google Scholar 

  • Keller, M.D., BeUows, W.K. and Guillard, R.R.L. (1989) A survey of dimethylsulfide production in 12 classes of marine phytoplankton, in Biogenic Sulfur in the Environment (eds E.S. Saltzman and W.J. Cooper), American Chemical Society, Washington, D.C., pp. 167–82.

    Google Scholar 

  • Kerkhof, L. and Ward, B.B. (1993) Comparison of nucleic acid hybridization and fluorometry for measurement of the relationship between RNA/DNA ratio and growth rate in a marine bacterium. Applied and Environmental Microbiology, 59, 1303–9.

    PubMed  CAS  Google Scholar 

  • Kolter, R., Siegele, D.A. and Tormo, A. (1993) The stationary phase of the bacterial life cycle. Annual Review of Microbiology, 47, 855–74.

    PubMed  CAS  Google Scholar 

  • LaRoche, J., Mortain-Bertrand, A. and Falkowski, P.G. (1991) Light intensity-induced changes in cab mRNA and light harvesting complex II apoprotein levels in the unicellular chorophyte Dunaliella tertiolecta. Plant Physiology, 97, 147–53.

    PubMed  CAS  Google Scholar 

  • LaRoche, J., Geider, R.J., Graziano, L.M. et al. (1993) Induction of specific proteins in eukaryotk algae grown under iron-deficient, phosphorus-deficient, or nitrogen-deficient conditions. Journal of Phycology, 29, 767–77.

    CAS  Google Scholar 

  • LaRoche, J., Murray, H., Orellana, M. et al. (1995) Flavodoxin expression as an indicator of iron limitation in marine diatoms. Journal of Phycology, 31, 520–30.

    Google Scholar 

  • LaRoche, J., Boyd, P.W., McKay, R.M.L. et al. (1996) Flavodoxin as an in situ marker for iron stress in phytoplankton. Nature, 382, 802–5.

    CAS  Google Scholar 

  • Laudenbach, D.E., Reith, M.E. and Straus, N.A. (1988) Isolation, sequence analysis, and transcriptional studies of the flavodoxin gene from Anacystis nidulans R2. Journal of Bacteriology, 170, 258–65.

    PubMed  CAS  Google Scholar 

  • Lee, S.H. and Kemp, P.F. (1994) Single-cell RNA content of natural marine planktonie bacteria measured by hybridization with multiple 16S rRNA-targeted fluorescent probes. Limnology and Oceanography, 39, 869–79.

    CAS  Google Scholar 

  • McCarthy, J.J. and Goldman, J. (1979) Nitrogenous nutrition of marine phytoplankton in nutrient-depleted waters. Science, 203, 670–2.

    PubMed  CAS  Google Scholar 

  • McClelland, M., Mathieudaude, F. and Welsh, J. (1995) RNA fingerprinting and differential display using arbitrarily primed pcr. Trends in Genetics, 11, 242–6.

    PubMed  CAS  Google Scholar 

  • Madigan, M.T., Martinko, J.M. and Parker, J. (1997) Brock Biology of Microorganisms, 8th edn, Prentice-Hall, Upper Saddle River, NJ.

    Google Scholar 

  • Mager, W.H. and De Kruijff, A.J.J. (1995) Stress-induced transcriptional activation. Microbiological Reviews, 59, 506–31.

    PubMed  CAS  Google Scholar 

  • Mann, N.H. (1995) How do cells express nutrient limitation at the molecular level?, in Molecular Ecology of Aquatic Microbes (ed. I. Joint), Springer-Verlag, Berlin, pp. 171–90.

    Google Scholar 

  • Martin, J.H., Coale, K.H., Johnson, K.S. et al. (1994) Testing the iron hypothesis in ecosystems of the Equatorial Pacific Ocean. Nature, 371, 123–9.

    CAS  Google Scholar 

  • Matrai, P.A. and Keller, M.D. (1993) Dimethylsulfide in a large-scale cocco-lithophore bloom in the Gulf of Maine. Continental Shelf Research, 13, 831–43.

    Google Scholar 

  • Miller, P.E. and Scholin, C.A. (1996) Identification of cultured Pseudo-nitzschia (Bacillariophyceae) using species-specific LSU rRNA-targeted fluorescent probes. Journal ofPhycology, 32, 646–55.

    CAS  Google Scholar 

  • Moore, P.L., MacCoubrey, L.C. and Haugland, R.P. (1990) A rapid, pH insensitive, two color fluorescence viability (cytotoxicity) assay. Journal of Cell Biology, 111, 58a.

    Google Scholar 

  • Morel, F.M.M. (1987) Kinetics of nutrient uptake and growth in phytoplankton. Journal of Phycology, 23, 137–50.

    CAS  Google Scholar 

  • Morel, F.M.M., Rueter, J.G., Anderson, D.M. et al. (1979) Aquil: a chemically defined phytoplankton culture medium for trace metal studies. Journal of Phycology, 15, 135–41.

    CAS  Google Scholar 

  • Morel, F.M.M., Reinfelder, J.R., Roberts, S.B. et al. (1994) Zinc and carbon co-limitation of marine phytoplankton. Nature, 369, 740–2.

    CAS  Google Scholar 

  • Orellana, M.V. and Perry, M.J. (1992) An immunoprobe to measure RuBisCO concentrations and maximal photosynthetic rates of individual phytoplankton cells. Limnology and Oceanography, 37, 478–90.

    CAS  Google Scholar 

  • Orellana, M.V. and Perry, M.J. (1995) Optimization of an immunofluorescent assay of the internal enzyme ribulose-l,5-bisphosphate carboxylase (RUBISCO) in single phytoplankton cells. Journal ofPhycology, 31, 785–94.

    CAS  Google Scholar 

  • Palenik, B. and Koke, J.A. (1995) Characterization of a nitrogen-regulated protein identified by cell surface biotinylation of a marine phytoplankton. Applied and Environmental Microbiology, 61, 3311–15.

    PubMed  CAS  Google Scholar 

  • Palenik, B. and Morel F.M.M. (1990a) Amino acid utilization by a marine phytoplankton: a novel mechanism. Limnology and Oceanography, 35, 260–9.

    CAS  Google Scholar 

  • Palenik, B. and Morel, F.M.M. (1990b) Comparison of cell-surface L-amino acid oxidases from several marine phytoplankton. Marine Ecology Progress Series, 59, 195–201.

    CAS  Google Scholar 

  • Palenik, B. and Morel, F.M.M. (1991) Amine oxidases of marine phytoplankton. Applied and Environmental Microbiology, 57, 2440–3.

    PubMed  CAS  Google Scholar 

  • Pan, Y., Subba Rao, D.V., Mann, K.H. et al. (1996a) Effects of silicate limitation on production of domoic acid, a neurotoxin, by the diatom Pseudonitzschia multiseries. I. Batch culture studies. Marine Ecology Progress Series, 131, 225–33.

    CAS  Google Scholar 

  • Pan, Y., Subba Rao, D.V., Mann, K.H. et al. (1996b) Effects of silicate limitation on production of domoic acid, a neurotoxin, by the diatom Pseudonitzschia multiseries. II. Continuous culture studies. Marine Ecology Progress Series, 131, 235–43.

    CAS  Google Scholar 

  • Pantoja, S. and Lee, C. (1994) Cell surface oxidation of amino acids in seawater. Limnology and Oceanography, 39, 1718–26.

    CAS  Google Scholar 

  • Parpais, J., Marie, D., Partensky, F. et al. (1996) Effect of phosphorus starvation on the cell cycle of the photosynthetic prokaryote Prochlorococcus spp. Marine Ecology Progress Series, 132, 265–74.

    CAS  Google Scholar 

  • Pena, M.M.O. and Bullerjahn, G.S. (1995) The DPSA protein of Synechococcus sp strain PCC 7942 is a DNA-binding hemoprotein — linkage of the DPS and bacterioferritin protein families. Journal of Biological Chemistry, 270, 22478–82.

    PubMed  CAS  Google Scholar 

  • Pena, M.M.O., Burkhart, W. and Bullerjahn, G.S. (1995) Purification and characterization of a Synechococcus sp strain PCC 7942 polypeptide similar to the stress-induced DPS/PEXB protein of Escherichia coli. Archives of Microbiology, 163, 337–44.

    PubMed  CAS  Google Scholar 

  • Perry, M.J. (1976) Phosphate utilization by an oceanic diatom in phosphorus-limited chemostat culture and in the oligotrophic waters of the central North Pacific. Limnology and Oceanography, 21, 88–107.

    CAS  Google Scholar 

  • Price, N.M., Harrison, G.I., Hering, J.G. et al. (1991) Preparation and chemistry of the artificial algal culture medium Aquil. Biological Oceanography, 6, 443–61.

    Google Scholar 

  • Provasoli, L., McLaughin, J.J.A. and Droop, M. (1957) The development of artificial media for marine algae. Archiv fur Mikrobiologie, 25, 392–428.

    PubMed  CAS  Google Scholar 

  • Rawat, M. and Moroney, J.V, (1995) The regulation of carbonic anhydrase and ribulose-l,5-bisphosphate carboxylase oxygenase activase by light and CO2 in Chlamydommas reinhardtii. Plant Physiology, 109, 937–44.

    PubMed  CAS  Google Scholar 

  • Redfield, A.C., Ketchum, B.H. and Richards, F.A. (1963) The influence of organisms on the composition of seawater, in The Sea (ed. M.N. Hill), Wiley Intersdence, New York, pp. 26–79.

    Google Scholar 

  • Reitan, K.I., Rauiuzzo, J.R. and Olsen, Y. (1994) Effect of nutrient limitation on fatty acid and lipid content of marine mieroalgae. Journal of Phycology, 30, 972–9.

    CAS  Google Scholar 

  • Richardson, T.L. and Cullen, J.J. (1995) Changes in buoyancy and chemical composition during growth of a coastal marine diatom: ecological and biogeochemical consequences. Marine Ecology Progress Series, 128, 77–90.

    CAS  Google Scholar 

  • Rijstenbil, J.W., Sandee, A., Van Drie, J. et al. (1994) Interaction of toxic trace metals and mechanisms of detoxification in the planktordc diatoms Ditylum brightwelli and Thalassiosira pseudonana. FEMS Microbiology Reviews, 14, 387–96.

    PubMed  CAS  Google Scholar 

  • Robinson, N.J. (1989) Algal metallothioneins: secondary metabolites and proteins. Journal of Applied Phycology, 1, 5–18.

    CAS  Google Scholar 

  • Savoie, D.L. and Prospero, J.M. (1989) Comparison of oceanic and continental sources of non-sea salt sulphate over the Pacific Ocean. Nature, 339, 685–7.

    CAS  Google Scholar 

  • Scanlan, D.J., Mann, N.H. and Carr, N.G. (1993) The response of the picoplanktonic marine cyanobacterium Synechococcus spedes WH7803 to phosphate starvation involves a protein homologous to the periplasmic phosphate binding protein of Escherichia coli. Molecular Microbiology, 10, 181–91.

    PubMed  CAS  Google Scholar 

  • Selvin, R., Reguera, B., Bravo, I. et al. (1988/89) Use of fluorescein diacetate (FDA) as a single-cell probe of metabolic activity in dinoflagellate cultures. Biological Oceanography, 6, 505–11.

    Google Scholar 

  • Sharp, J.H. (1977) Excretion of organic matter by marine phytoplankton: do healthy cells do it? Limnology and Oceanography, 22, 381–99.

    CAS  Google Scholar 

  • Shifrin, N.S. and Chisholm, S.W. (1981) Phytoplankton lipids: interspedfic differences and effects of nitrate, silicate and light-dark cydes. Journal of Phycology, 17, 374–84.

    CAS  Google Scholar 

  • Shumway, S.E., Cued, T.L, Newell, R.C. et al. (1985) Particle selection, ingestion, and absorption in filter-feeding bivalves. Journal of Experimental Marine Biology and Ecology, 9, 77–92.

    Google Scholar 

  • Silver, S. and Walderhaug, M. (1992) Gene regulation of plasmid-determined and chromosome determined inorganic ion transport in bacteria. Microbiological Reviews, 56, 195–228.

    PubMed  CAS  Google Scholar 

  • Simon, N., Lebot, N., Marie, D. et al. (1995) Fluorescent in situ hybridization with rRNA-targeted oligonudeotide probes to identify small phytoplankton by flow cytometry. Applied and Environmental Microbiology, 61, 2506–13.

    PubMed  CAS  Google Scholar 

  • Smayda, T. (1980) Phytoplankton spedes succession, in Physiological Ecology of Phytoplankton (ed. I. Morris), Blackwell, Oxford, pp. 493–570.

    Google Scholar 

  • Stefels, J. and van Boekel, W.H.M. (1993) Production of DMS from dissolved DMSP in axenic cultures of the marine phytoplankton spedes Phaeocystis sp. Marine Ecology Progress Series, 97, 11–18.

    CAS  Google Scholar 

  • Stephenson, M.D. and Leonard, G.H. (1994) Evidence for the decline of silver and lead and the increase of copper from 1977 to 1990 in the coastal marine waters of California. Marine Pollution Bulletin, 28, 148–53.

    CAS  Google Scholar 

  • Stone, C.J. (1989) A comparison of algal diets for drripede nauplii. Journal of Experimental Marine Biology and Ecology, 132, 17–40.

    Google Scholar 

  • Sunda, W.G. (1992) Feedback interactions between zinc and phytoplankton in seawater. Limnology and Oceanography, 37, 25–40.

    CAS  Google Scholar 

  • Sunda, W.G. and Huntsman, S.A. (1986) Relationships among growth rate, cellular concentrations and manganese transport kinetics in estuarine and oceanic species of the diatom Thalassiosira. Journal of Phycology, 22, 259–70.

    CAS  Google Scholar 

  • Suzuki, Y. and Takahashi, M. (1995) Growth responses of several diatom species isolated from various environments to temperature. Journal of Phycology, 31, 880–96.

    Google Scholar 

  • Van Rijswijk, P., Bakker, C. and Vink, M. (1989) Daily fecundity of Temora longicornis (Copepoda, Calanoida) in the Oosterschelde estuary (SW Netherlands). Netherlands Journal of Sea Research, 23, 293–303.

    Google Scholar 

  • Vaulot, D. and Partensky, F. (1992) Cell cycle distributions of prochlorophytes in the North Western Mediterranean Sea. Deep-Sea Research, 39, 727–42.

    CAS  Google Scholar 

  • Vaulot, D., LeBot, N., Marie, D. et al. (1996) Effect of phosphorus on the Synechococcus cell cycle in surface Mediterranean waters during summer. Applied and Environmental Microbiology, 62, 2527–33.

    PubMed  CAS  Google Scholar 

  • Vrieling, E.G. and Anderson, D.M. (1996) Immunofluorescence in phytoplankton research: applications and potential. Journal of Phycology, 32, 1–16.

    Google Scholar 

  • Waite, A., Bienfang, P.K. and Harrison, P.J. (1992a) Spring bloom sedimentation in a subarctic ecosystem. I. Nutrient sensitivity. Marine Biology, 114, 119–29.

    CAS  Google Scholar 

  • Waite, A., Bienfang, P.K. and Harrison, P.J. (1992b) Spring bloom sedimentation in a subarctic ecosystem. II. Succession and sedimentation. Marine Biology, 114, 119–29.

    CAS  Google Scholar 

  • Waterbury, J.B. and Willey, J.M. (1988) Isolation and growth of marine planktonic cyanobacteria, in Methods in Enzymology — Cyanobacteria (eds L. Packer and A.N. Glazer), Academic Press, San Diego, pp. 100–5.

    Google Scholar 

  • Wemmie, J.A., Szczypka, M.S., Thiele, D.J. et al. (1994) Cadmium tolerance mediated by the yeast AP-1 protein requires the presence of an ATP-binding cassette transporter encoding gene YCF1. Journal of Biological Chemistry, 269, 32592–7.

    PubMed  CAS  Google Scholar 

  • Werner-Washburne, M., Braun, E., Johnston, G.C. et al. (1993) Stationary phase in the yeast Saccharomyces cerevisiae. Microbiological Reviews, 57, 383–101.

    PubMed  CAS  Google Scholar 

  • Yee, D. and Morel, F.M.M. (1996) In vivo substitution of zinc by cobalt in carbonic anhydrase of a marine diatom. Limnology and Oceanography, 41, 573–7.

    CAS  Google Scholar 

  • Yentsch, C.M. and Campbell, J.W. (1991) Phytoplankton growth: perspectives gained by flow cytometry. Journal of Plankton Research, 13, S83-S108.

    Google Scholar 

  • Zhou, J.M. and Goldsbrough, P.B. (1995) Structure, organization and expression of the metallothionein gene family in Arabidopsis. Molecular and General Genrtics, 248, 318–28.

    CAS  Google Scholar 

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Palenik, B., Wood, A.M. (1998). Molecular Markers of Phytoplankton Physiological Status and Their Application at the Level of Individual Cells. In: Cooksey, K.E. (eds) Molecular Approaches to the Study of the Ocean. Springer, Dordrecht. https://doi.org/10.1007/978-94-011-4928-0_8

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