Abstract
In recent years the biotechnology and analytical medicine have seen great advances in development of novel biochip technologies that open new horizons for identifying and quantifying biomolecules and diagnosing diseases. The hope is that the smaller/faster/cheaper approach that worked so well for computer-chip manufacturers will be applied to biotech as well. The goal is to use these tools to better understand the role played by genes in health and disease, to speed the drugs development, to improve diagnostic tools, and even to build handheld devices that produce parallel medical tests by one measurement (Cahill, 2001; Vo-Dinh et al, 2001; Weinberger et al, 2000).
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Baselt, D.R., Lee, G.U. and Colton, R..I. (1996), “Biosensor based on force microscope technology”, J. Vac. Sci. Technol. B 14(2), 789–793.
Qaselt, D.R., Lee, G.U., Hansen, K.M., Chrisey, L.A. and Colton, R.J. (1997), “A High-Sensitivity Micromachined Biosensor”, Proc. IEEE 85 (4), 672–680.
Qaselt, D.R., Lee, G. U., Natesan, M., Metzger, S. W., Sheehan, P. E. and Colton, R. J. (1998), “A Biosensor Based on Magnetoresistance Technology”, Biosensors and Bioelectronics 13, 731–739
Binnig, G. and Rohrer, H. (1982), “Scanning tunneling microscopy”, Helv. Phys. Acta 55, 726–729.
Binnig, G., Quate, CF. and Gerber, Ch. (1986), “Atomic force microscope”, Phys. Rev. Lett. 56, 930–933.
Boyd, R.D. and Vcrran, J. (2001), “A novel method for measuring bacteria-surface adhesion directly using the atomie force microscope”, Microbiology, submitted.
Burnham, N.A., Kulik, A.J. and Gremaud, G. (1998), “Tip-Surface Interactions”, in Procedures in Scanning Probe Microscopy (R.J. Colton et al., Eds.), pp. 565–84, John Wiley and Sons, Chichester, UK.
Burnham, N.A. and Kulik, A.J. (1999), “Surface forces and adhesion”, in Handbook of Micro/Nanotribology (B. Bhushan, Ed.), pp. 247–2713, CRC Press, Boca Raton, Florida.
Cahill, D. (2001), “Protein and antibody arrays and their medical applications”, Journal of Immunological Methods 250, 81–91
Caillat, P., David, D., Belleville, M, Clerc, F.,C. Massit, C, Revol-Cavalier, F., Peltie, P., Livache, T., Bidan, G., Roget, A. and Crapez, E. (1999), “Biochips on CMOS: an active matrix address array for DNA analysis”, Sensors and Actuators B 61, 154–162.
Chen, X., Davies, M.C., Roberts, C.J., Tendier, S.J.B, and Williams, P.M. (1997), “Recognition of protein adsorption onto polymer surfaces by scanning force microscopy and probe-surface adhesion measurements with protein-coated probes”, Langmuir 13, 4106–4111.
Chen, X., Patel, N., Davies, MC, Roberts, C J., Tendier, S.J.B., Williams, P.M., Davies, J., Dawkes, A.C. and Edwards, J.C. (1998), “Application of protein-coated scanning forcemicroscopy probes in measurements of surface affinity to protein adsorption”, Appl. Phys. A 66, S631–S634.
Chernov, A.A., Rashkovich, L.N., I.V. Yaminsky, I.V. and Gvozdev, N.V. (1999), “Kink kinetiks, exchange fluxes, ID’ nucleation’ and adsorption on the (010) face of orthorombic lysozyme crystals”, J.Phys.: Condens. Matter. 11, 9969–9984.
Csáki, A., Möller, R., Köhler, J.M, Straube, W. and Fritzsche, W. (2001), “DNA monolayer on gold substrates characterized by nanoparticle labeling and scanning force microscopy ”, Nucleic Acids Research 29, e81, 1–5.
Dempsey, E., Diamond, D., Smyth, M. R, Urban, G., Jobst, G., Moser, I., Verpoorte, E.M.J., Manz, A., Widmer, H. M., Rabenstein, K. and Freancy, R. (1997), “Design and development of a miniaturised total chemical anylysis system for on-line lactate and glucus monitoring in biological samples”, Analytica Chimica Acta 346, 341–349.
Erdem, A., Meric, B., Kerman, K. Dalbasti, T. and Ozsoz, M. (1999), “Detection of interaction between metal complex indicator and DNA by using electrochemical biosensor”, Electroanalysis 11, 1372–1376.
Feldman, K., Höhner, G, Spencer, N. D, Harder, P. and Grunze, M. (1999), “Probing resistance to protein adsorption of oligo(ethylene glycol)-terminated self-assembled monolayers by scanning force microscopy” J Am. Chem. Soc. 121. 10134–10141.
Fisher, M.I. and Tjörnhage, T. (2000), “Structure and activity of lipid membrane biosensor surfaces studied with atomic force microscopy and a resonant mirror”, Biosensors and Bioelectronics 15, 463–471.
Fritz, J., Bailer, M. K., Lang, H. P., Rothuizen, H.; Vettiger, P., Meyer, E., Güntherodt, H.-J., Gerber, Ch. and Gimzewski, J. K. (2000), “Translating Biomolecular Recognition into Nanomechanics” Science 288, 316–318.
Fritzsche, W., Csáki, A., Reichert, J., Möller, R. and Köhler, J.M. (2001), “New colloidal gold-based detection scheme for DNA chip technology”, European Microscopy and Analysis 72, 5–7.
Green, R. J., Frazier, R. A., Shakeshe, K. M., Davies, M. C, Roberts, C. J. and Tendier, S. J. B. (2000), “Surface plasmon resonance analysis of dynamic biological interactions with biomaterials”, Biomaterials 21, 1823–1835.
Hirata, Y., Laukkanen, M. L., Keina, K., Shigematsu, H., Aizawa, M. and Mizutani, F. (2001), “Microscopic characterization of Langmuir-Blodgett films incorporating biosynthetically lipid-tagged antibody”, Sensors and Actuators B 3750,1–6.
Ikai, A. (1996), “STM and AFM of bio/organic molecules and structures”, Surface Science Reports 26, 261–332.
Kondoh, J., Matsui, Y., Shiokawa, S. and Wlodarski, W. (1994), “Enzyme-immobilized SH-SAW biosensor”,Sensors and Actuators B 20, 199–203.
Lee, G.U., Chrisey, L.A. and Colton, R.J. (1994),’ Direct measurement of the forces between complementary strands of DNA”, Science 266, 771–773.
Magonov, S. N. and Wangbo, M-H. (1996), Surface analysis with STM and AFM, VCH Publishers, Inc., New York, USA.
McGurk, S.L., Green, R.J., Sanders, G.H.W., Davies, M.C., Roberts, C.J., Tendier, S.J.B, and Williams, P.M. (1999), “Molecular interactions of biomoiecules with surface-engineered interfaces using atomic force microscopy and surface plasmon resonance”, Langmuir 15, 5136–5140.
Möller. R., Csáki, A., Köhler, J.M. and Fritzsche, W. (2000), “DNA probes on chip surfaces studied by scanning force microscopy using specific binding of colloidal gold”, Nucleic Acids Research 28, c91, 1–5.
Morris, V. J., Kirby, A. R. and Gunning, A. P. (1999), Atomic Force Microscopy for Biologists, Imperial College Press; London, UK.
Moulin, A.M., O’Shea, S.J. and Weiland M.E. (2000), “Microcantilever-based biosensors”, Ultramicrascopy 82, 23–31.
Noy, A, Vezenov, D.V., Kayyem, J. F., Meade, T.J. and Lieber, C. M. (1997), “Stretching and breaking duplex DNA by chemical force microscopy”, Chemistry and Biology 4, 519–527.
Patel, N., Davies, M.C., Heaton, R.J., Roberts, C.J., Tendier, S.J.B, and Williams, P.M. (1998), “A scanning probe microscopy study of the physisorption and chemisorption of protein molecules onto carboxylate terminated self-assembledmonolayers”, Appl. Phys. A 66, S569–S574.
Pereira, R.S. (2000), “Detection of the absorption of glucose molecules by living cells using atomic force microscopy”, FEBS Letters 475, 43–46.
Raiteri, R., Grattarola, M., Butt, H.-J. and Sklâdal, P. (2001), “Micromechanical cantilever-based biosensors”, Sensors and Actuators B 79, 115–126.
Reichert, J., Csâki, A., Köhler, J.M. and Fritzsche, W. (2000), “Chip-Based Optical Detection of DNA Hybridization by Means of Nanobead Labeling”, Analytical Chemistry 72, 6025–6029
Ridout, M.J., Brownsey, G.J., Gunning, A.P. and Morris, V.J. (1998), “Characterisation of the polysaccharide produced by Acetobacter xylinum strain CR1:4 by light scattering and atomic force microscopy”, International Journal of Biological Macromolecules 23, 287–293.
Ros, R., Schwesinger, F., Padeste, C, Plückthun, A., Anselmetti, D., Güntherodt, H.-J. and Tiefenauer, L. (1999), “SPM for functional identification of individual biomolecules”, Proceedings of SPIE 3607, 84–88.
Sarid, D. (1991), Scanning force microscopy; with applications to electric, magnetic and atomic forces, Oxford Publishing, New York, USA.
Siedlecki, Ch. and Marchant, R. (1998), “Atomic force microscopy for characterization of the biomaterial interface”, Biomaterials 19,441–454.
Spangler, B.D. and Tyler, B. (1999), “Capture agents for a quartz crystal microbalance-continuous flow biosensor: functionalized self-assembled monolayers on gold”. Anal. Chim. Acta 399, 51–62.
Swanson, P., Gelbart, R., Atlas, E., Yang, L., Grogan, T., Butler, W. F., Ackley, D. E. and Sheldon, E. (2000). “A fully multiplexed CMOS biochip for DNA analysis”, Sensors and Actuators B 64, 22–30.
Tamayo J., Humphris, A.D.L., Malloy, A.M. and Miles, M.J. (2001), “Chemical sensors and biosensors in liquid environment based on microcantilevers with amplified quality factor”, Ultramicroscopy 86, 167–173.
Tamayo, J. Humphris, A. D. L., Malloy, A.M. and Miles, M.J. (2001), “Chemical sensors and biosensors in liquid environment based on microcantilevers with amplified quality factor” Ultramicroscopy 86, 167–173.
Vanstccnkiste, S.O., Corneillie, S.I., Schacht, E.H., Chen, X., Davies, M. C, Moens, M. and Van Vacck, L. (2000), “Direct measurement of protein adhesion at biomaterial surfaces by scanning force microscopy”, Langmuir 16, 3330–3336.
Vinckicr, A. and Semenza, G. (1998), “Measuring elasticity of biological materials by atomic force microscopy”, FEBS Letters 430, 12–16.
Vo-Dinh, T., Cullum, B. M. and Stokes, D. L. (2001), “Nanosensors and biochips: frontiers in biomolecular diagnostics”, Sensors and Actuators B 74, 2–11.
Weinberger, S.R., Morris, T.S. and Pawlak, M. (2000), “Recent trends in protein biochip technology”, Pharmagenomics Review, 1. http://www.ashlev-pub.com/html/displavarticle.asp? ArticlclD “3052
Wcisendangcr, R. (1994), Scanning probe microscopy and spectroscopy, Cambridge University Press, Cambridge, UK.
Welsch, W., Klein, C, Öksüzoglu, R.M., Schickfus, M.V. and Hunklinger, S. (1997), “lmmunoscnsing with surface acoustic wave sensors”, Sensors and Actuators A 62
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2002 Springer Science+Business Media Dordrecht
About this chapter
Cite this chapter
Stukalov, O.M. (2002). Application Of Atomic Force Microscopy In Protein And Dna Biochips Development. In: Buzaneva, E., Scharff, P. (eds) Frontiers of Multifunctional Nanosystems. NATO Science Series, vol 57. Springer, Dordrecht. https://doi.org/10.1007/978-94-010-0341-4_25
Download citation
DOI: https://doi.org/10.1007/978-94-010-0341-4_25
Publisher Name: Springer, Dordrecht
Print ISBN: 978-1-4020-0561-9
Online ISBN: 978-94-010-0341-4
eBook Packages: Springer Book Archive