Skip to main content

Relationship of telomere sequence and constitutive heterochromatin in the human and apes as detected by PRINS

  • Chapter
Chromosome Painting

Abstract

Hitherto, hominoid telomere sequences have been localized only at essential telomere regions of chromosome ends using ordinary FISH. In the present study, however, a PRINS technique revealed the new insight that chromosomes of humans and apes have many internal locations of the sequence. Moreover, a combination of PRINS and post-PRINS C-banding elucidated that the internal telomeric repeats corresponded with regions of constitutive heterochromatin. The PRINS reaction appeared more sensitive than the standard FISH technique, as it provided greater resolution of FITC signals. Furthermore, G- and R-like bands yielded by post-PRINS counter-staining with DAPI and PI, respectively, were informative in identification of chromosomes as well as the detailed characterization of those chromosomal structures signaling positive for the PRINS reaction. The combined efforts of FITC signals, DAPI-, PI-, and C-bands are most precisely analyzed through the use of a microscope mounted with a cooled CCD camera and an auto-wheel fluorescence filter set regulated by a computer.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

Abbreviations

DAPI:

4’,6-diamidine-2’-phenylindole dihydrochloride

FISH:

fluorescence in situ hybridization

FITC:

flourescein isothiocyanate

PI:

profidium iodide

PRINS:

in situ

References

  1. Azzalin CM, Mucciolo E, Bertoni L, Giulotto E (1997). Fluorescence in situ hybridization with a synthetic (T2AG3)n polynucleotide detects several intrachromosomal telomere-like repeats on human chromosomes. Cytogenet Cell Genet 78: 112–115.

    Article  PubMed  CAS  Google Scholar 

  2. Blackburn EH, Greider CW (ed) (1995). Telomeres. Cold Spring Harbor Laboratory Press.

    Google Scholar 

  3. Go Y, Rakotoarisoa G, Kawamoto Y, Rnadrianjafy A, Koyama N, Hirai H (2000). PRINS analysis of the telomeric sequence in seven lemurs. Chromosome Res 8: 57–65.

    Article  PubMed  CAS  Google Scholar 

  4. Gosden J, Hanratty D, Starling J, Fantes J, Mitchell A, Porteous D (1991). Oligonucleotide-primed in situ DNA synthesis (PRINS): a method for chromosome mapping, banding, and investigation of sequence organization. Cytogenet Cell Gnet 57: 100–104.

    Article  CAS  Google Scholar 

  5. Haaf T, Schmid M (1987). Chromosome heteromorphisms in the gorilla karyotype. J Heredity 78: 287–292.

    CAS  Google Scholar 

  6. Kipling D (1995). The telomere. Oxford/New York/Tokyo: Oxford University Press.

    Google Scholar 

  7. Koch JE, Kølvraa S, Petersen KB, Gregersen N, Bolund L (1989). Oligonucleotide-priming methods for the chromosome-specific labelling of alpha satellite DNA in situ. Chromosoma 98: 259–265.

    Article  PubMed  CAS  Google Scholar 

  8. Metcalf CJ, Eldridge MDB, Toder R, Johnston PG (1998). Mapping the distribution of the telomeric sequence (T2AG3)n in the Marcopodoidea (Marsupialia), by fluorescence in situ hybridization. I. The swamp wallaby, Wallabia bicolor. Chromosome Res 6: 603–610.

    Article  Google Scholar 

  9. Meyene J, Baker RJ, Hobart HH, Hsu TC, Ryder OA, Ward OG, Wily JE, Wurster-Hill DH, Yates TL, Moyzis RK (1990). Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequence in vertebrate chromosomes. Chromosoma 99: 3–10.

    Article  Google Scholar 

  10. Slijepcevic P, Hande MP, Buffler SD, Lansdorp P, Bryant PE (1997). Telomere length, chromatin structure and chromosome fusigenic potential. Chromosoma 106: 413–421.

    Article  PubMed  CAS  Google Scholar 

  11. Sumner AT (1972). A simple technique for demonstrating centromeric heterochromatin. Exp Cell Res 75: 304–306.

    Article  PubMed  CAS  Google Scholar 

  12. Sumner AT (1990). Chromosome banding. London: Unwin Hyman.

    Google Scholar 

  13. Therkelsen AJ, Nielsen A, Koch J, Hindkjaer J, Kølvraa S (1995). Staining of human telomeres with primed in situ labeling (PRINS). Cytogenet Cell Genet 68: 115–118.

    Article  PubMed  CAS  Google Scholar 

  14. Thomsen PD, Hoyheim B, Christensen K (1996). Recent fusion events during evolution of pig chromosomes 3 and 6 identified by comparison with the babirusa karyotype. Cytogenet Cell Genet 73: 203–208.

    Article  PubMed  CAS  Google Scholar 

  15. Vermeesch JR, Meurichy W, Van Den Berghe H, Marynen P, Petit P (1996). Differences in the distribution and nature of the interstitial telomeric (TTAGGG)n sequences in the chromosomes of the Guraffidae, okapi (Okapia johnstoni) and giraffe (Giraffa camelopardalis): evidence for ancestral telomeres at the okapi polymorphic rob (4;26) fusion site. Cytogenet Cell Genet 72: 310–315.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2001 Springer Science+Business Media Dordrecht

About this chapter

Cite this chapter

Hirai, H. (2001). Relationship of telomere sequence and constitutive heterochromatin in the human and apes as detected by PRINS. In: Sharma, A.K., Sharma, A. (eds) Chromosome Painting. Springer, Dordrecht. https://doi.org/10.1007/978-94-010-0330-8_5

Download citation

  • DOI: https://doi.org/10.1007/978-94-010-0330-8_5

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-94-010-3840-9

  • Online ISBN: 978-94-010-0330-8

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics