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The MCM (Most Complicated Molecule) in Today’s Quantum, Chemistry : tRNAPhe. Molecular Potential Versus Molecular Field

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New Horizons of Quantum Chemistry

Part of the book series: International Academy of Quantum Molecular Science ((QUCH,volume 4))

Abstract

The distribution of the electrostatic field of yeast tRNAPheis calculated on an envelope surrounding the macromolecule and compared with the corresponding distribution of the electrostatic potential. It is demonstrated that, whereas the strongest potentials of the macromolecule are concentrated at the center of its three dimensional structure, the strongest fields are found all along its phosphodiester backbone, associated with the anionic oxygens of the phosphates. It is further shown that the binding of counterions to the macromolecule has very different effects on the resulting potentials and fields.

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References

  1. Pullman, B., Lavery, R. and Pullman, A.: Eur. J. Biochem, in press-

    Google Scholar 

  2. Pullman, B., Pullman, A. and Lavery, R.: in “The Living State” ed. R.H. Mishra, Wiley-Interscience, in press.

    Google Scholar 

  3. Pullman, A- and Pullman, B-: 1981, Quart. Rev. Biophys. 14 pp. 289–380.

    Article  CAS  Google Scholar 

  4. Pullman, A. and Pullman, B.: in “Chemical Applications of Atomic and Molecular Electrostatic Potentials”, 1981, ed. P. Politzer and D.G. Truhlar, Plenum, N.Y., pp. 381–405.

    Google Scholar 

  5. Lavery, R., Pullman, A., Pullman, B. and de Oliveira, M.: 1980, Nucl. Acid. Res. 8, pp. 5095–5111.

    Article  CAS  Google Scholar 

  6. Lavery, R., Corbin, S. and Pullman, A.: 1981, Int. J. Quant. Chem., Quant. Biol. Symp. 8, pp. 171–183.

    Article  CAS  Google Scholar 

  7. Lavery, R., Pullman, A. and Corbin, S.: 1981, in “Biomolecular Stereodynamics”, Vol. I, ed. R.H. Sarma, Adenine Press, N.Y., pp. 185–193.

    Google Scholar 

  8. Lavery, R., Pullman, A. and Pullman, B.: 1981, Int. J. Quant. Chem. 20, pp. 49–62.

    Article  CAS  Google Scholar 

  9. Lavery, R., Pullman, A. and Pullman, B.: Theoret. Chim. Acta, in press.

    Google Scholar 

  10. Lavery, R. and Pullman, B.: Nucl. Acid. Res., in press.

    Google Scholar 

  11. Lavery, R., Pullman, A. and Pullman, B.: in preparation.

    Google Scholar 

  12. Transfer RNA’s are adaptor molecules which selectively transport a given amino acid and place it at the appropriate spot on the ribosomal matrix where the biosynthesis of proteins occurs. tRNAPheis specific for phenylalanine.

    Google Scholar 

  13. Quigley, G.J., Teeter, M.M. and Rich, A.: 1978, Proc. Natl. Acad. Sci. (USA) 75, pp. 64–68.

    Article  CAS  Google Scholar 

  14. Sussman, J.L., Holbrook, S.R., Warrant, R.W., Church, G.M. and Kim, S.H.: 1978, J. Mol. Biol. 123, pp. 607–630.

    Article  CAS  Google Scholar 

  15. Jack, A., Ladner, J.E. and Klug, A.: 1976, J. Mol. Biol. 108, pp. 619–649.

    Article  CAS  Google Scholar 

  16. Stout, C.D., Misuno, H., Rubin, J., Brennam, T., Rao, S.T. and Sundaralingam, M.: 1976, Nucl. Acid. Res. 3, pp. 1111–1123.

    CAS  Google Scholar 

  17. Port, G.N.J, and Pullman, A.: 1970, FEBS Letters 31, pp. 70–73.

    Article  Google Scholar 

  18. Goldblum, A., Perahia, D. and Pullman, A.: 1979, Int. J. Quant. Chem. 15, pp. 121–129.

    Article  CAS  Google Scholar 

  19. Lavery, R. and Pullman, B.: 1981, Int. J. Quant. Chem. 20, pp. 259–272.

    Article  CAS  Google Scholar 

  20. We have employed a set of coordinates further refined from those of reference 14, communicated to us by Dr. S.-H. Kim.

    Google Scholar 

  21. Holbrook, S.R., Sussman, J.L., Warrant, R.W., Church, G.M. and Kim, S.-H.: 1977, Nucl. Acid. Res. 4, pp. 2811–2820.

    Article  CAS  Google Scholar 

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© 1983 D. Reidel Publishing Company

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Lavery, R., Pullman, A. (1983). The MCM (Most Complicated Molecule) in Today’s Quantum, Chemistry : tRNAPhe. Molecular Potential Versus Molecular Field. In: Löwdin, PO., Pullman, B. (eds) New Horizons of Quantum Chemistry. International Academy of Quantum Molecular Science, vol 4. Springer, Dordrecht. https://doi.org/10.1007/978-94-009-7950-5_28

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  • DOI: https://doi.org/10.1007/978-94-009-7950-5_28

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-94-009-7952-9

  • Online ISBN: 978-94-009-7950-5

  • eBook Packages: Springer Book Archive

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