Abstract
Global industrialization has resulted in a widespread contamination of the environment with persistent addition of organic and inorganic wastes. The contaminants enter the environment either by natural processes or through human activity. The natural contamination originates from excessive withering of minerals from rocks or displacement from the groundwater or subsurface layers of the soil. Disposal of industrial effluents, sewage sludge, deposition of air-borne industrial wastes, military operations, mining, land-fill operations, industrial solid-waste disposal and the growing use of agricultural chemicals such as pesticides, herbicides and fertilizers are sources of human-assisted contamination of the environment. Heavy metals exert some important roles in some biochemical reactions, being essential to the growth and development of microorganisms, plant and animals. However, in high concentrations they can form unspecific compounds, creating cytotoxic effects. They exhibit a range of toxicities towards microorganisms, depending on physico-chemical factors, speciation etc., while toxic effects can arise from natural processes in the soil, and on microbial communities are more commonly associated with anthropogenic contamination or redistribution of toxic metals in terrestrial ecosystems. A variety of mechanisms have been implicated in the adaptation, tolerance, and resistance of microorganisms to a metal pollutant: precipitation of metals as phosphates, carbonates, and/or sulfides, volatilization via methylation or ethylation, physical exclusion of electronegative components in membranes and extracellular polymeric substances (EPS), energy-dependent metal efflux systems, and intracellular sequestration with low molecular weight, cysteine-rich proteins. The efficiency of these mechanisms depends on many parameters, among which the metal itself, the species studied, time, temperature, pH, presence of plant communities near the microfauna, interactions of the metal with other compounds. Most microorganisms are known to have specific genes for resistance to toxic ions of heavy metals. This chapter summarizes the recent progress in the field of molecular microbial ecology of metal resistant bacteria with emphasis that how the genetic capacity of the organisms can be exploited for the remediation of heavy metal pollution. Genetic improvement may help to develop the field of existing methodologies to decontamination processes are also discussed in the chapter.
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References
Abou-Shanab RAI, van Berkum P, Angle JS (2007) Heavy metal resistance and genotypic analysis of metal resistance genes in gram-positive and gram-negative bacteria present in Ni-rich serpentine soil and in the rhizosphere of Alyssum murale. Chemosphere 68:360–367
Adriano DC, Wenzel WW, Vangronsveld J, Bolan NS (2004) Role of assisted natural remediation in environmental cleanup. Geoderma 122:121–142
Agrawal J, Sherameti I, Varma A (2011) Detoxification of heavy metals: state of art. In: Sherameti I, Varma A (eds) Detoxification of heavy metals. Springer, Heidelberg
Ahmaruzzaman M (2011) Industrial wastes as low-cost potential adsorbents for the treatment of wastewater laden with heavy metals. Adv Colloid Interface Sci 166:36–59
Akinola OM, Njoku LKL, Ifitezue VN (2011) Assessment of heavy metals (lead and cadmium) concentration in Paspalum orbiculare near municipal refuse dumpsites in Lagos State, Nigeria. J Ecol Nat Environ 3:509–514
Ansari MI, Malik A (2007) Biosorption of nickel and cadmium by metal resistant bacterial isolates from agricultural soil irrigated with wastewater. Bioresour Technol 98:3149–3153
Ansari MI, Masood F, Malik A (2011) Bacterial biosorption: a technique for remediation of heavy metals. In: Ahmad I, Ahmad F, Pichtel J (eds) Microbes and microbial technology: agricultural and environmental applications. Springer, New York
Avery SV (2001) Metal toxicity in yeast and the role of oxidative stress. Adv Appl Microbiol 49:111–142
Barac T, Taghavi S, Borremans B, Provoost A, Oeyen L, Colpaert JV, Vangronsveld J, van der Lelie D (2004) Engineered endophytic bacteria improve phytoremediation of water-soluble, volatile, organic pollutants. Nat Biotechnol 22:583–588
Barkay T, Schaefer JJ (2001) Metal and radionuclide bioremediation: issues, considerations and potentials. Curr Opin Microbiol 4:318–323
Barkay T, Wagner-Dobler I (2005) Microbial transformations of mercury: potentials, challenges, and achievements in controlling mercury toxicity in the environment. Adv Appl Microbiol 57:1–52
Barkay TS, Miller M, Summers AO (2003) Bacterial mercury resistance from atoms to ecosystems. FEMS Microbiol Rev 27:355–384
Bazylinski DA, Frankel RB (2004) Magnetosome formation in prokaryotes. Nat Rev Microbiol 2:217–230
Beazley MJ, Martinez RJ, Sobecky PA, Webb SM, Taillefert M (2007) Uranium biomineralization as a result of bacterial phosphatase activity: insights from bacterial isolates from a contaminated subsurface. Environ Sci Technol 41:5701–5707
Bentley R, Chasteen TG (2002) Microbial methylation of metalloids: arsenic, antimony and bismuth. Microbiol Mol Biol Rev 66:250–271
Benzerara K, Morin G, Yoon TH, Miot J, Tyliszczak T, Casiot C, Bruneel O, Farges F, Brown GE Jr (2008) Nanoscale study of as biomineralization in an acid mine drainage system. Geochim Cosmochim Acta 72:3949–3963
Blakemore R (1975) Magnetotactic bacteria. Science 190:377–379
Borch T, Kretzschmar R, Kappler A, Van Cappellen P, Ginder-Vogel M, Voegelin A, Campbell K (2010) Biogeochemical redox processes and their impact on contaminant dynamics. Environ Sci Technol 44:15–23
Bruins MR, Kapil S, Oehme FW (2000) Microbial resistance to metals in the environment. Ecotoxicol Environ Saf 45:198–207
Cases I, de Lorenzo V (2005a) Genetically modified organisms for the environment: stories of success and failure and what we have learned from them. Int Microbiol 8:213–222
Cases I, de Lorenzo V (2005b) Promoters in the environment: transcriptional regulation in its natural context. Nat Rev Microbiol 3:105–118
Cervantes C, Campos-Garcia J (2007) Reduction and efflux of chromate by bacteria. In: Nies DH, Silver S (eds) Molecular microbiology of heavy metals. Springer, Berlin
Cervantes C, Campos-Garcia J, Devars S, Gutierrez-Corona F, Loza-Tavera H, Torres-Guzman JC, Moreno-Sanchez R (2001) Interactions of chromium with microorganisms and plants. FEMS Microbiol Rev 25:335–347
Chan CS, Fakra SC, Edwards DC, Emerson D, Banfield JF (2009) Iron oxihydroxide mineralization on microbial extracellular polysaccharides. Geochim Cosmochim Acta 73:3807–3818
Chasteen TG, Bentley R (2003) Biomethylation of selenium and tellurium: microorganisms and plants. Chem Rev 103:1–26
Cooksey DA (1994) Molecular mechanisms of copper resistance and accumulation in bacteria. FEMS Microbiol Rev 14:381–386
Corbitt RA (1999) Standard hand book of environmental engineering, 2nd edn. McGraw Hill, New York
DiChristina TJ, Fredrickson JK, Zachara JM (2005) Enzymology of electron transport: energy generation with geochemical consequences. Rev Miner Geochem 59:27–52
Dowdle PR, Oremland RS (1998) Microbial oxidation of elemental selenium in soil slurries and bacterial cultures. Environ Sci Technol 32:749–3755
Du X, Boonchayaanant B, Wu W, Fendorf S, Bargar J, Criddle CS (2011) Reduction of uranium(VI) by soluble iron(II) conforms with thermodynamic predictions. Environ Sci Technol 45:4718–4725
Dungan RS, Frankenberger WT (1999) Microbial transformations of selenium and the bioremediation of seleniferous environments. Bioremediation J 3:171–188
Dupraz C, Reid RP, Braissant O, Decho AW, Norman RS, Visscher PT (2009) Processes of carbonate precipitation in modern microbial mats. Earth Sci Rev 96:141–162
Ehrlich HL, Newman DK (2009) Geomicrobiology, 5th edn. CRC Press/Taylor & Francis, Boca Raton
Finneran KT, Anderson RT, Nevin KP, Lovley DR (2002) Bioremediation of uranium-contaminated aquifers with microbial U(VI) reduction. Soil Sediment Contam 11:339–357
Fomina M, Alexander IJ, Hillier S, Gadd GM (2004) Zinc phosphate and pyromorphite solubilization by soil plant-symbiotic fungi. Geomicrobiol J 21:351–366
Fomina M, Hillier S, Charnock JM, Melville K, Alexander IJ, Gadd GM (2005a) Role of oxalic acid over-excretion in toxic metal mineral transformations by Beauveria caledonica. Appl Environ Microbiol 71:371–381
Fomina M, Alexander IJ, Colpaert JV, Gadd GM (2005b) Solubilization of toxic metal minerals and metal tolerance of mycorrhizal fungi. Soil Biol Biochem 37:851–866
Fomina M, Podgorsky VS, Olishevska SV, Kadoshnikov VM, Pisanska IR, Hillier S, Gadd GM (2007) Fungal deterioration of barrier concrete used in nuclear waste disposal. Geomicrobiol J 24:643–653
Francis AJ, Dodge CJ, Gillow JB (1992) Biodegradation of metal citrate complexes and implications for toxic metal mobility. Nature 356:140–142
Frentiu T, Ponta M, Levei E, Cordos EA (2009) Study of partitioning and dynamics of metals in contaminated soil using modified four-step BCR sequential extraction procedure. Chem Pap 63:239–248
Gadd GM (2005) Microorganisms in toxic metal-polluted soils. In: Buscot F, Varma A (eds) Microorganisms in soils: roles in genesis and functions. Springer, Heidelberg
Gadd GM (1993) Microbial formation and transformation of organometallic and organometalloid compounds. FEMS Microbiol Rev 11:297–316
Gadd GM (1996) Influence of microorganisms on the environmental fate of radionuclides. Endeavour 20:150–156
Gadd GM (1999) Fungal production of citric and oxalic acid: importance in metal speciation, physiology and biogeochemical processes. Adv Microb Physiol 41:4792
Gadd GM (2001) Accumulation and transformation of metals by microorganisms. In: Rehm H-J, Reed G, Puhler A, Stadler P (eds) Biotechnology, a multi-volume comprehensive treatise, vol 10, special processes. Wiley, Weinheim, pp 225–264
Gadd GM (2009) Biosorption: critical review of scientific rationale, environmental importance and significance for pollution treatment. J Chem Technol Biotechnol 84:13–28
Gadd GM (2010) Minerals and microbes: geomicrobiology and bioremediation. Microbiology 156:609–643
Gadd GM, Sayer JA (2000) Fungal transformations of metals and metalloids. In: Lovley DR (ed) Environmental microbe-metal interactions. American Society of Microbiology, Washington, DC
Geets J, Vangronsveld J, Diels L, Taghavi S, van der Lelie D (2008) Microbial activities, monitoring and application as part of a management strategy for heavy metal-contaminated soil and ground water. In: Naidu R (ed) Developments in soil science. Elsevier B.V., London, pp 521–559
Gharieb MM, Kierans M, Gadd GM (1999) Transformation and tolerance of tellurite by filamentous fungi: accumulation, reduction and volatilization. Mycol Res 103:299–305
Goyal N, Jain SC, Banerjee UC (2003) Comparative studies on the microbial adsorption of heavy metals. Adv Environ Res 7:311–319
Hameed MSA (2006) Continuous removal and recovery of lead by alginate beads free and alginate-immobilized Chlorella vulgaris. Afr J Biotechnol 5:1819–1823
Hamilton WA (2003) Microbially influenced corrosion as a model system for the study of metal–microbe interactions: a unifying electron transfer hypothesis. Biofouling 19:65–76
Hasin AA, Gurman SJ, Murphy LM, Perry A, Smith TJ, Gardiner PE (2010) Remediation of chromium (VI) by a methane-oxidizing bacterium. Environ Sci Technol 44:400–405
Haveman SA, Pedersen K (2002) Microbially mediated redox processes in natural analogues for radioactive waste. J Contam Hydrol 55:161–174
Hietala KA, Roane TM (2009) Microbial remediation of metals in soils. In: Singh A et al. (eds) Advances in applied bioremediation, Soil biology, vol 17, Springer, Berlin/Heidelberg, pp 201–220
Holden JF, Adams MWW (2003) Microbe–metal interactions in marine hydrothermal vents. Curr Opin Chem Biol 7:160–165
Hobman JL, Wilson JR, Brown NL (2000) Microbial mercury reduction. In: Lovley DR (ed) Environmental microbe-metal interactions. Am Soc Microbiol Washington, pp 177–197
Hu P, Brodie EO, Suzuki Y, McAdams HH, Andersen GL (2005) Whole-genome transcriptional analysis of heavymetal stresses in Caulobacter crescentus. J Bacteriol 187:8437–8449
Huang PM (2008) Impacts of physicochemical–biological interactions on metal and metalloid transformations in soils: an overview. In: Violante A, Huang PM, Gadd GM (eds) Biophysico-chemical processes of heavy metals and metalloids in soil environments. John Wiley and Sons, Wiley, Chichester
Huang PM, Wang MC, Wang MK (2004) Mineral–organic–microbial interactions. In: Hillel D, Rosenzweig C, Powlson DS, Scow KM, Singer MJ, Sparks DL, Hatfield J (eds) Encyclopedia of soils in the environment. Elsevier, Amsterdam
Joerger K, Joerger R, Olsson E, Granqvist CG (2001) Bacteria as workers in the living factory: metal accumulating-bacteria and their potential for material science. Trends Biotechnol 19:15–20
Johnson DB (2003) Chemical and microbiological characteristics of mineral spoils and drainage waters at abandoned coal and metal mines. Water Air Soil Pollut 3:47–66
Jussila MM, Zhao J, Suominen L, Lindström K (2007) TOL plasmid transfer during bacterial conjugation in vitro and rhizoremediation of oil compounds in vivo. Environ Pollut 146:510–524
Kadirvelu K, Thamaraiselvi K, Namasivayam C (2001) Removal of heavy metals from industrial wastewaters by adsorption onto activated carbon prepared from an agricultural solid waste. Bioresour Technol 76:63–65
Kannan SK, Krishnamoorthy R (2006) Isolation of mercury resistant bacteria and influence of abiotic factors on bioavailability of mercury – a case study in Pulicat Lake North of Chennai, South East India. Sci Total Environ 367:341–353
Karlson U, Frankenberger WT (1988) Effects of carbon and trace element addition on alkylselenide production by soil. Soil Sci Soc Am J 52:1640–1644
Karlson U, Frankenberger WT (1989) Accelerated rates of selenium volatilization from California soils. Soil Sci Soc Am J 53:749–753
Komeili A (2007) Molecular mechanisms of magnetosome formation. Annu Rev Biochem 76:351–366
Kube M, Beck A, Zinder SH, Kuhl H, Reinhardt R, Adrian L (2005) Genome sequence of the chlorinated compound respiring bacterium Dehalococcoides species strain CBDB1. Nat Biotechnol 23:1269–1273
Landa ER (2005) Microbial biogeochemistry of uranium mill tailings. Adv Appl Microbiol 57:113–130
Lee Y-A, Hendson M, Panopoulus NJ, Schrott MN (1994) Molecular cloning, chromosomal mapping, and sequence analysis of copper resistance genes from Xanthomonas campestris pv. juglandis: homology with blue copper proteins and multicopper oxidase. J Bacteriol 176:173–188
Lee SM, Grass G, Rensing C, Barrett SR, Yates CJD, Stoyanov JV, Brown NL (2002) The Pco proteins are involved in periplasmic copper handling in Escherichia coli. Biochem Biophys Res Commun 295:616–620
Lesmana SO, Febriana N, Soetaredjo FE, Sunarso J, Ismadji S (2009) Studies on potential applications of biomass for the separation of heavy metals from water and wastewater. Biochem Eng J 44:19–41
Levin SV, Guzev VS, Aseeva IV, Babeva IP, Marfenina OE, Umarov MM (1989) Heavy metals as a factor of anthropogenic impact on the soil microbiota. Mosk Gos University, pp 5–46
Li YH, Ding J, Luan ZK, Di ZC, Zhu YF, Xu C, Wu DH, Wei BQ (2003) Competitive adsorption of Pb2+, Cu2+ and Cd2+ ions from aqueous solutions by multiwalled carbon nanotubes. Carbon 41:2787–2792
Lian B, Chen Y, Zhu L, Yang R (2008a) Effect of microbial weathering on carbonate rocks. Earth Sci Front 15:90–99
Lian B, Wang B, Pan M, Liu C, Teng HH (2008b) Microbial release of potassium from K-bearing minerals by thermophilic fungus Aspergillus fumigatus. Geochim Cosmochim Acta 72:87–98
Liu S, Zhang F, Chen J, Sun GX (2011) Arsenic removal from contaminated soil via biovolatilization by genetically engineered bacteria under laboratory conditions. J Environ Sci 23:1544–1550
Lloyd JR (2003) Microbial reduction of metals and radionuclides. FEMS Microbiol Rev 27:411–425
Lloyd JR, Renshaw JC (2005) Bioremediation of radioactive waste: radionuclide-microbe interactions in laboratory and field-scale studies. Curr Opin Biotechnol 16:254–260
Losi ME, Frankenberger WT (1998) Microbial oxidation and solubilization of precipitated elemental selenium in soil. J Environ Qual 27:836–843
Lovley DR (2001) Anaerobes to the rescue. Science 293:1444–1446
Lovley DR, Coates JD (1997) Bioremediation of metal contamination. Curr Opin Biotechnol 8:285–289
Lowenstam HA (1981) Minerals formed by organisms. Science 211:1126–1131
Macaskie LE, Bonthrone KM, Yong P, Goddard DT (2000) Enzymically mediated bioprecipitation of uranium by a Citrobacter sp.: a concerted role for exocellular lipopolysaccharide and associated phosphatase in biomineral formation. Microbiology 146:1855–1867
Machado MD, Santos MSF, Gouveia C, Soares HMVM, Soares EV (2008) Removal of heavy metals using a brewer’s yeast strain of Saccharomyces cerevisiae: the flocculation as a separation process. Bioresour Technol 99:2107–2115
Macur RE, Jackson CR, Botero LM, Mcdermott TR, Inskeep WP (2004) Bacterial populations associated with the oxidation and reduction of arsenic in an unsaturated soil. Environ Sci Technol 38:104–111
Maier RM (2000) Microorganisms and organic pollutants. In: Maier RM, Pepper IL, Gerba CP (eds) Environmental microbiology. Academic, San Diego
Masood F, Malik A (2011) Biosorption of metal ions from aqueous solution and tannery effluents by Bacillus sp. FM1. J Environ Sci Health Part A 46:1667–1674
McLean J, Beveridge TJ (2001) Chromate reduction by a pseudomonad isolated from a site contaminated with chromate copper arsenate. Appl Environ Microbiol 67:1076–1084
McLean JE, Bledsoe BE (1992) Behavior of metals in soils. In: Ground water issue EPA/540/S-92/018. US-EPA, Ground Water and Ecosystems Restoration Division, Ada Oklahoma
McLean JS, Lee JU, Beveridge TJ (2002) Interactions of bacteria and environmental metals, fine-grained mineral development, and bioremediation strategies. In: Huang PM, Bollag J-M, Senesi N (eds) Interactions between soil particles and microorganisms. Wiley, New York, pp 227–261
Merkle SA (2006) Engineering forest trees with heavy metal resistance genes. Silvae Genetica 55:263–268
Merroun ML, Selenska-Pobell S (2008) Bacterial interactions with uranium: an environmental perspective. J Contam Hydrol 102:285–295
Mergeay M, Monchy S, Vallaeys T, Auquier V, Benotmane A, Bertin P, Taghavi S, Dunn J, van der Lelie D, Wattinez R (2003) Ralstonia metallidurans, a bacterium specifically adapted to toxic metals: towards a catalogue of metal-responsive genes. FEMS Microbiol Rev 27:385–410
Miot J, Benzerara K, Morin G, Kappler A, Bernard S, Obst M, Ferard C, Skouri-Panet F, Guigner JM, Posth N, Galvez M, Brown GE Jr, Guyot F (2009) Iron biomineralization by neutrophilic iron-oxidizing bacteria. Geochim Cosmochim Acta 73:696–711
Moore CM, Gaballa A, Hui M, Ye RW, Helmann JD (2005) Genetic and physiological responses of Bacillus subtilis to metal ion stress. Mol Microbiol 57:27–40
Moral R, Gilkes RJ, Jordan MM (2005) Distribution of heavy metals in calcareous and non-calcareous soils in Spain. Water Air Soil Pollut 162:127–142
Morillo JA, Aguilera M, Ramos-Cormenzana A, Monteoliva-Sánchez M (2006) Production of a metal-binding exopolysaccharide by Paenibacillus jamilae using two-phase olive-mill waste as fermentation substrate. Curr Microbiol 53:189–193
Muhammad A, Muhammad S, Sarfraz H (2008) Perspectives of bacterial ACC deaminase in phytoremediation. Trends Biotechnol 25:356–362
Mulligan CN, Yong RN, Gibbs BF (2001) Heavy metal removal from sediments by biosurfactants. J Hazard Mater 85:111–125
Muralisastry, Ahmad A, Khan MI, Rajivkumar (2003) Biosynthesis of metal nanoparticles using fungi and actinnomycetes. Curr Sci 85:162–170
Muyzer G, Stams AJM (2008) The ecology and biotechnology of sulphate-reducing bacteria. Nat Rev Microbiol 6:441–454
Nair A, Juwarkar AA, Singh SK (2007) Production and characterization of siderophores and its application in arsenic removal from contaminated soil. Water Air Soil Pollut 180:199–212
Nies DH (1999) Microbial heavy-metal resistance. Appl Microbiol Biotechnol 51:730–750
Nies DH (2003) Efflux-mediated heavy metal resistance in prokaryotes. FEMS Microbiol 27:313–339
Nies DH, Silver S (1995) Ion efflux systems involved in bacterial metal resistances. Ind J Microbiol 14:186–199
Nilgiriwala KS, Alahari A, Rao AS, Apte SK (2008) Cloning and overexpression of alkaline phosphatase PhoK from Sphingomonas sp. strain BSAR-1 for bioprecipitation of uranium from alkaline solutions. Appl Environ Microbiol 74:5516–5523
Ohtake H, Cervantes C, Silver S (1987) Decreased chromate uptake in Pseudomonas fluorescens carrying a chromate resistance plasmid. J Bacteriol 169:3853–3856
Oremland R, Stolz J (2000) Dissimilatory reduction of selenate and arsenate in nature. In: Lovley DR (ed) Environmental microbe–metal interactions. American Society for Microbiology, Washington, DC
Oremland RS, Hollibaugh JT, Maest AS, Presser TS, Miller LG, Culbertson CW (1989) Selenate reduction to elemental selenium by anaerobic bacteria in sediments and culture: biogeochemical significance of a novel sulfate-independent respiration. Appl Environ Microbiol 55:2333–2343
Oremland RS, Hoeft SE, Santini JM, Bano N, Hollibaugh RA, Hollibaugh JT (2002) Anaerobic oxidation of arsenite in Mono Lake water and by facultative, arsenite-oxidizing chemoautotroph, strain MLHE-1. Appl Environ Microbiol 68:4795–4802
Paez-Espino D, Tamames J, de Lorenzo V, Canovas D (2009) Microbial responses to environmental arsenic. Biometals 22:117–130
Parnell JJ, Park J, Denef V, Tsoi T, Hashsham S, Quensen JI, Tiedje JM (2006) Coping with polychlorinated biphenyl (PCB) toxicity: physiological and genome wide responses of Burkholderia xenovorans LB400 to PCB-mediated stress. Appl Environ Microbiol 72:6607–6614
Pepper IL, Gentry TJ, Newby DT, Roane TM, Josephson KL (2002) The role of cell bioaugmentation and gene bioaugmentation in the remediation of co-contaminated soils. Environ Health Perspect 110:943–946
Poljsak B, Pócsi I, Raspor P, Pesti M (2010) Interference of chromium with biological systems in yeast and fungi: a review. J Basic Microbiol 50:21–36
Poole K (2005) Efflux-mediated antimicrobial resistance. J Antimicrob Chemother 56:20–51
Rajendran P, Muthukrishnan J, Gunasekaran P (2003) Microbes in heavy metal remediation. Indian J Exp Biol 41:935–944
Rawlings DE (1997) Mesophilic, autotrophic bioleaching bacteria: description, physiology and role. In: Rawlings DE (ed) Biomining: theory, microbes and industrial processes. Springer, Berlin, pp 229–245
Rawlings DE (2002) Heavy metal mining using microbes. Annu Rev Microbiol 56:65–91
Ray S, Ray MK (2009) Bioremediation of heavy metal toxicity-with special reference to chromium. Al Ameen J Med Sci 2:57–63
Rensing C, Newby DT, Pepper IL (2002) The role of selective pressure and selfish DNA in horizontal gene transfer and soil microbial community adaptation. Soil Biol Biochem 34:285–296
Rosen BP (2002) Biochemistry of arsenic detoxification. FEBS Lett 529:86–92
Ruta L, Paraschivescu C, Matache M, Avramescu S, Farcasanu IC (2010) Removing heavy metals from synthetic effluents using “kamikaze” Saccharomyces cerevisiae cells. Appl Microbiol Biotechnol 85:763–771
Sandrin TR, Chech AM, Maier RM (2000) A rhamnolipid biosurfactant reduces cadmium toxicity during naphthalene biodegradation. Appl Environ Microbiol 66:4585–4588
Sayer JA, Cotter-Howells JD, Watson C, Hillier S, Gadd GM (1999) Lead mineral transformation by fungi. Curr Biol 9:691–694
Schippers A, Sand W (1999) Bacterial leaching of metal sulphides proceeds by two indirect mechanisms via thiosulfate or via polysulfides and sulphur. Appl Environ Microbiol 65:319–321
Schottel J, Mandal A, Clark D, Silver S, Hedges RW (1974) Volatilization of mercury and organomercurials determined by inducible R-factor systems in enteric bacteria. Nature 251:335–337
Schue M, Dover LG, Besra GS, Parkhill J, Brown NL (2009) Sequence and analysis of a plasmid encoded mercury resistance operon from Mycobacterium marinum identifies MerH, a new mercuric ion transporter. J Bacteriol 19:439–444
Senko JM, Istok JD, Suflita JM, Krumholz LR (2002) In-situ evidence for uranium immobilization and remobilization. Environ Sci Technol 36:1491–1496
Shukla KP, Singh NK, Sharma S (2010) Bioremediation: developments, current practices and perspectives. Genet Eng Biotechnol J 3:1–20
Siddiqui MH, Kumar A, Kesari KK, Arif JM (2009) Biomining-a useful approach toward metal extraction. Am Eurasian J Agron 2:84–88
Silver S, Phung LT (1996) Bacterial heavy metal resistance: new surprises. Annu Rev Microbiol 50:753–789
Silver S, Phung LT (2005) A bacterial view of the periodic table: genes and proteins for toxic inorganic ions. J Ind Microbiol Biotechnol 32:587–605
Silver S, Phung LT (2009) Heavy metals, bacterial resistance. In: Schaechter M (ed) Encyclopedia of microbiology. Elsevier, Oxford
Silver S, Budd K, Leahy KM, Shaw WV, Hammond D, Novick RP, Willsky GR, Malamy MH, Rosenberg H (1981) Inducible 92 plasmid-determined resistance to arsenate, arsenite and antimony(III) in Escherichia coli and Staphylococcus aureus. J Bacteriol 146:983–996
Singh JS, Abhilash PC, Singh HB, Singh RP, Singh DP (2011) Genetically engineered bacteria: an emerging tool for environmental remediation and future research perspectives. Gene 480:1–9
Smith WL, Gadd GM (2000) Reduction and precipitation of chromate by mixed culture sulphate-reducing bacterial biofilms. J Appl Microbiol 88:983–991
Solioz M, Stoyanov JV (2003) Copper homeostasis in Enterococcus hirae. FEMS Microbiol Rev 27:183–195
Spain A, Alm E (2003) Implications of microbial heavy metal tolerance in the environment. Rev Undergrad Res 2:1–6
Stolz JF, Oremland RS (1999) Bacterial respiration of arsenic and selenium. FEMS Microbiol Rev 23:615–627
Strasser H, Burgstaller W, Schinner F (1994) High yield production of oxalic acid for metal leaching purposes by Aspergillus niger. FEMS Microbiol Lett 119:365–370
Tabak HH, Lens P, van Hullebusch ED, Dejonghe W (2005) Developments in bioremediation of soils and sediments polluted with metals and radionuclides–1. Microbial processes and mechanisms affecting bioremediation of metal contamination and influencing metal toxicity and transport. Rev Environ Sci Bio Technol 4:115–156
Tabak HH, Lens P, van Hullebusch ED, Dejonghe W (2005b) Developments in bioremediation of soils and sediments polluted with metals and radionuclides–1. Microbial processes and mechanisms affecting bioremediation of metal contamination and influencing metal toxicity and transport. Rev Environ Sci Biotechnol 4:115–156
Thomas KW (2008) Molecular approaches in bioremediation. Curr Opin Biotechnol 19:572–578
Thompson-Eagle ET, Frankenberger WT, Karlson U (1989) Volatilization of selenium by Alternaria alternata. Appl Environ Microbiol 55:1406–1413
Tomei FA, Barton LL, Lemanski CL, Zocco TG, Fink NH, Sillerud LO (1995) Transformation of selenate and selenite to elemental selenium by Desulfovibrio desulfuricans. J Ind Microbiol 14:329–336
Tunali S, Cabuk A, Akar T (2006) Removal of lead and copper ions from aqueous solutions by bacterial strain isolated from soil. Chem Eng J 115:203–211
Unaldi MN, Korkmaz H, Ankan B, Coral G (2003) Plasmid-encoded heavy metal resistance in Pseudomonas sp. Bull Environ Contam Toxicol 71:1145–1150
Urgun-Demirtas M, Stark B, Pagilla K (2006) Use of genetically engineered microorganisms (GEMS) for the bioremediation of contaminants. Crit Rev Biotechnol 26:145–164
Van Hullebusch ED, Lens PNL, Tabak HH (2005) Developments in bioremediation of soils and sediments polluted with metals and radionuclides. 3. Influence of chemical speciation and bioavailability on contaminants immobilization/mobilization bio-processes. Rev Environ Sci Biotechnol 4:185–212
Violante A, Cozzolino V, Perelomov L, Caporale AG, Pigna M (2010) Mobility and bioavailability of heavy metals and metalloids in soil environments. J Soil Sci Plant Nutr 10:268–292
Voloudakis AE, Reignier TM, Cooksey DA (2005) Regulation of resistance to copper in Xanthomonas axonopodis pv. vesicatoria. Appl Environ Microbiol 71:782–789
Wall JD, Krumholz LR (2006) Uranium reduction. Annu Rev Microbiol 60:149–166
Wang JL, Chen C (2006) Biosorption of heavy metals by Saccharomyces cerevisiae: a review. Biotechnol Adv 24:427–451
Wang J, Chen C (2009) Biosorbents for heavy metals removal and their future. Biotechnol Adv 27:195–226
Watanabe ME (2001) Can bioremediation bounce back? Nat Biotechnol 19:1111–1115
White C, Gadd GM (1998) Accumulation and effects of cadmium on sulphate-reducing bacterial biofilms. Microbiology 144:1407–1415
White C, Gadd GM (1997) An internal sedimentation bioreactor for laboratory-scale removal of toxic metals from soil leachates using biogenic sulphide precipitation. J Ind Microbiol 18:414–421
White C, Gadd GM (2000) Copper accumulation by sulphate reducing bacterial biofilms and effects on growth. FEMS Microbiol Lett 183:313–318
Williams CJ, Aderhold D, Edyvean GJ (1998) Comparison between biosorbents for the removal of metal ions from aqueous solution. Water Res 32:216–224
Yabusaki SB, Fang Y, Long PE, Resch CT, Peacock AD, Komlos J, Jaffe PR, Morrison SJ, Dayvault RD, White DC, Anderson RT (2007) Uranium removal from groundwater via in situ biostimulation: field-scale modeling of transport and biological processes. J Contam Hydrol 93:216–235
Yee N, Kobayashi DY (2008) Molecular genetics of selenate reduction by Enterobacter cloacae SLD1a-1. Adv Appl Microbiol 64:107–123
Zawadzka AM, Crawford RL, Paszczynski AJ (2007) Pyridine-2, 6-bis (thiocarboxylic acid) produced by Pseudomonas stutzeri KC reduces chromium(VI) and precipitates mercury, cadmium, lead and arsenic. Biometals 20:145–158
Zhu R, Wu M, Yang J (2011) Mobilities and leachabilities of heavy metals in sludge with humus soil. J Environ Sci 23:247–254
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Masood, F., Malik, A. (2013). Current Aspects of Metal Resistant Bacteria in Bioremediation: From Genes to Ecosystem. In: Malik, A., Grohmann, E., Alves, M. (eds) Management of Microbial Resources in the Environment. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-5931-2_11
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