Abstract
The regulation of gene expression in the developing seed has received much attention due to its economic importance but also because it represents a paradigm for plant gene regulation. The wealth of information obtained on a few well-studied systems is potentially much more widely applicable. Recent findings have revealed the participation of functionally homologous transcription factors in the cereal endosperm and cotyledon of dicots, suggesting these two regulation networks are composed of conserved or related elements.
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References
Albani D, Hammond-Kosack MC, Smith C, Conlan S, Colot V, Holdsworth M, Bevan MW (1997) The wheat transcriptional activator SPA: a seed-specific bZIP protein that recognizes the GCN4-like motif in the bifactorial endosperm box of prolamin genes. Plant Cell 9:171–184
Alonso-Peral MM, Li J, Li Y, Allen RS, Schnippenkoetter W, Ohms S, White R, Millar AA (2010) The microRNA159-regulated GAMYB-like genes Inhibit growth and promote programmed cell death in Arabidopsis. Plant Physiol 154:757–771
Ambrose MJ, Wang TL, Cook SK, Hedley CL (1987) An analysis of seed development in Pisum sativum. J Exp Bot 38:1909–1920
Bäumlein H, Nagy I, Villarroel R, Inzé D, Wobus U (1992) Cis-analysis of a seed protein gene promoter: the conservative RY repeat CATGCATG within the legumin box is essential for tissue-specific expression of a legumin gene. Plant J 2:233–239
Bäumlein H, Miséra S, Luerßen H, Kölle K, Horstmann C, Wobus U, Müller AJ (1994) The FUS3 gene of Arabidopsis thaliana is a regulator of gene expression during late embryogenesis. Plant J 6:379–387
Bensmihen S, Rippa S, Lambert G, Jublot D, Pautot V, Granier F, Giraudat J, Parcy F (2002) The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis. Plant Cell 14:1391–1403
Bobb AJ, Chern MS, Bustos MM (1997) Conserved RY-repeats mediate transactivation of seed-specific promoters by the developmental regulator PvALF. Nucl Acids Res 25:641–647
Bollini R, Chrispeels MJ (1978) Characterization and subcellular localization of vicilin and phytohemagglutinin, the two major reserve proteins of Phaseolus vulgaris. Planta 142:291–298
Borisjuk L, Rolletschek H (2009) The oxygen status of the developing seed. New Phytol 182:17–30
Borisjuk L, Rolletschek H, Wobus U, Weber H (2003) Differentiation of legume cotyledons as related to metabolic gradients and assimilate transport into seeds. J Exp Bot 54:503–512
Braybrook SA, Stone SL, Park S, Bui AQ, Le BH, Fischer RL, Goldberg RB, Harada JJ (2006) Genes directly regulated by LEAFY COTYLEDON2 provide insight into the control of embryo maturation and somatic embryogenesis. Proc Natl Acad Sci U S A 103:3468–3473
Brocard-Gifford IM, Lynch TJ, Finkelstein RR (2003) Regulatory networks in seeds integrating developmental, abscisic acid, sugar, and light signaling. Plant Physiol 131:78–92
Burgess SR, Shewry P (1986) Identification of homologous globulins from embryos of wheat, barley, rye, and oats. J Exp Bot 37:1863–1871
Burr FA, Burr B (1982) Three mutations in Zea mays affecting zein accumulation: a comparison of zein polypeptides, in-vitro synthesis and processing, mRNA levels, and genomic organization. J Cell Biol 94:201–206
Casey R. (1999). Distribution of some properties of seed globulins. In: Shewry PR, Casey R (eds) Seed proteins. Kluwer Academic, Dordrecht, pp 617–633
Casson SA, Lindsey K (2006) The turnip mutant of Arabidopsis reveals that LEAFY COTYLEDON1 expression mediates the effects of auxin and sugars to promote embryonic cell identity. Plant Physiol 142:526–541
Century K, Reuber TL, Ratcliffe OJ (2008) Regulating the regulators: the future prospects for transcription-factor-based agricultural biotechnology products. Plant Physiol 147:20–29
Chandrasekharan MB, Bishop KJ, Hall TC (2003) Module-specific regulation of the β-phaseolin promoter during embryogenesis. Plant J 33:853–866
Chaw SM, Chang CC, Chen HL, Li WH (2004) Dating the monocot-dicot divergence and the origin of core eudicots using whole chloroplast genomes. J Mol Evol 58:424–441
Chern MS, Bobb AJ, Bustos MM (1996a) The Regulator of MAT2 (ROM2) protein binds to early maturation promoters and represses PvALF-activated transcription. Plant Cell 8:305–321
Chern MS, Eiben HG, Bustos MM (1996b) The developmentally regulated bZIP factor ROM1 modulates transcription from lectin and storage protein genes in bean embryos. Plant J 10:135–148
Ciceri P, Gianazza E, Lazzari B, Lippoli G, Genga A, Hoschek G, Schmidt RJ, Viotti A (1997) Phosphorylation of Opaque2 changes diurnally and impacts its DNA binding activity. Plant Cell 9:97–108
Coleman CE, Larkins BA (1999) The prolamins of maize. In: Shewry PR, Case R (eds) Seed proteins. Kluwer Academic, Dordrecht, pp 109–139
Corke FMK, Hedley CL, Wang TL (1990) An analysis of seed development Pisum sativum. XI. Cellular development and the deposition of storage protein in mature embryos grown in vivo and in vitro. Protoplasma 155:127–135
Cuddeford D (1995) Oats for animal feed. In: Welch RW (ed) The oat crop: production and utilization. Chapman and Hall, London, pp 321–358
de Pater S, Pham K, Chua NH, Memelink J, Kijne J (1993) A 22-bp fragment of the pea lectin promoter containing essential TGAC-like motifs confers seed-specific gene expression. Plant Cell 5:877–886
de Pater S, Katagiri F, Kijne J, Chua NH (1994) bZIP proteins bind to a palindromic sequence without an ACGT core located in a seed-specific element of the pea lectin promoter. Plant J 6:133–140
Diaz I, Vicente-Carbajosa J, Abraham Z, Martínez M, Isabel-La MI, Carbonero P (2002) The GAMYB protein from barley interacts with the DOF transcription factor BPBF and activates endosperm-specific genes during seed development. Plant J 29:453–464
Ericson ML, Rödin J, Lenman M, Glimelius K, Josefsson LG, Rask L (1986) Structure of the rapeseed 1.7S storage protein, napin, and its precursor. J Biol Chem 261:14576–14581
Ezcurra I, Ellerström M, Wycliffe P, Stålberg K, Rask L (1999) Interaction between composite elements in the napA promoter: both the B-box ABA-responsive complex and the RY/G complex are necessary for seed-specific expression. Plant Mol Biol 40:699–709
Ezcurra I, Wycliffe P, Nehlin L, Ellerström M, Rask L (2000) Transactivation of the Brassica napus napin promoter by ABI3 requires interaction of the conserved B2 and B3 domains of ABI3 with different cis-elements: B2 mediates activation through an ABRE, whereas B3 interacts with an RY/G-box. Plant J 24:57–66
Finkelstein RR, Gampala SSL, Rock CD (2002) Abscisic acid signaling in seeds and seedlings. Plant Cell 14:S15--S45
Forde BG, Heyworth A, Pywell J, Kreis M (1985) Nucleotide sequence of a B1 hordein gene and the identification of possible upstream regulatory elements in endosperm storage protein genes from barley, wheat, and maize. Nucl Acids Res 13:7327–7339
Gallardo K, Firnhaber C, Zuber H, Hericher D, Belghazi M, Henry C, Kuster H, Thompson RD (2007) A combined proteome and transcriptome analysis of developing Medicago truncatula seeds. Mol Cell Proteomics 6:2165–2179
Gampala SSL, Finkelstein RR, Sun SSM, Rock CD (2002) ABI5 interacts with abscisic acid signaling effectors in rice protoplasts. J Biol Chem 277:1689–1694
Gao G, Zhong Y, Guo A, Zhu Q, Tang W, Zheng W, Gu X, Wei L, Luo J (2006) DRTF: a database of rice transcription factors. Bioinformatics 22:1286–1287
Gazzarrini S, Tsuchiya Y, Lumba S, Okamoto M, McCourt P (2004) The transcription factor FUSCA3 controls developmental timing in Arabidopsis through the hormones gibberellin and abscisic acid. Developmental Cell 7:373–385
Gubler F, Raventos D, Keys M, Watts R, Mundy J, Jacobsen J (1999) Target genes and regulatory domains of the GAMYB transcriptional activator in cereal aleurone. Plant J 17:1–9
Guiltinan MJ, Marcotte WR Jr, Quatrano RS (1990) A plant leucine zipper protein that recognizes an abscisic acid response element. Science 250:267–271
Häger KP, Braun H, Czihal A, Müller B, Bäumlein H (1995) Evolution of seed storage protein genes: legumin genes of Ginkgo biloba. J Mol Evol 41:457–466
Halford NG, Shewry PR (2007) The structure and expression of cereal storage protein genes. In: Olsen OA (ed) Plant cell monographs. endosperm: development and molecular biology, vol 8. Springer, Berlin, pp 196–218
Hall TC, McLeester RC, Bliss FA (1977) Equal expression of the maternal and paternal alleles for the polypeptide subunits of the major storage protein of the bean Phaseolus vulgaris L. Plant Physiol 59:1122–1124
Hammond-Kosack MCU, Holdsworth MJ, Bevan MW (1993) In vivo footprinting of a low molecular weight glutenin gene (LMWG-1D1) in wheat endosperm. EMBO J 12:545–554
Hattori T, Terada T, Hamasuna S (1995) Regulation of the Osem gene by abscisic acid and the transcriptional activator VP1: analysis of cis-acting promoter elements required for regulation by abscisic acid and VP1. Plant J 7:913–925
Heck GR, Chamberlain AK, Ho THD (1993) Barley embryo globulin 1 gene, Beg1: characterization of cDNA, chromosome mapping and regulation of expression. Mol Gen Genet 239:209–218
Henderson JT, Li HC, Rider SD, Mordhorst AP, Romero-Severson J, Cheng JC, Robey J, Sung ZR, de Vries SC, Ogas J (2004) PICKLE acts throughout the plant to repress expression of embryonic traits and may play a role in gibberellin-dependent responses. Plant Physiol 134:995–1005
Hernández-Sebastià C, Marsolais F, Saravitz C, Israel D, Dewey RE, Huber SC (2005) Free amino acid profiles suggest a possible role for asparagine in the control of storage-product accumulation in developing seeds of low- and high-protein soybean lines. J Exp Bot 56:1951–1963
Higgins TJV, Chandler PM, Randall PJ, Spencer D, Beach LR, Blagrove RJ, Kortt AA, Inglis AS (1986) Gene structure, protein structure, and regulation of the synthesis of a sulfur-rich protein in pea seeds. J Biol Chem 261:11124–11130
Hobo T, Kowyama Y, Hattori T (1999) A bZIP factor, TRAB1, interacts with VP1 and mediates abscisic acid-induced transcription. Proc Natl Acad Sci U S A 96:15348–15353
Huang J, Bhinu VS, Li X, Dallal Bashi Z, Zhou R, Hannoufa A (2009) Pleiotropic changes in Arabidopsisf5h and sct mutants revealed by large-scale gene expression and metabolite analysis. Planta 230:1057–1069
Hwang YS, Ciceri P, Parsons RL, Moose SP, Schmidt RJ, Huang N (2004) The Maize O2 and PBF proteins act additively to promote transcription from storage protein gene promoters in rice endosperm cells. Plant Cell Physiol 45:1509–1518
Jones SI, Gonzalez DO, Vodkin LO (2010) Flux of transcript patterns during soybean seed development. BMC genomics 11:136
Kagaya Y, Toyoshima R, Okuda R, Usui H, Yamamoto A, Hattori T (2005) LEAFY COTYLEDON1 controls seed storage protein genes through its regulation of FUSCA3 and ABSCISIC ACID INSENSITIVE3. Plant Cell Physiol 46:399–406
Kawagoe Y, Campell BR, Murai N (1994) Synergism between CACGTG (G-box) and CACCTG cis-elements is required for activation of the bean seed storage protein β-phaseolin gene. Plant J 5:885–890
Kawagoe Y, Murai N (1996) A novel basic region/helix-loop-helix protein binds to a G-box motif CACGTG of the bean seed storage protein [beta]-phaseolin gene. Plant Sci 116:47–57
Keith K, Kraml M, Dengler NG, McCourt P (1994) fusca3: a heterochronic mutation affecting late embryo development in Arabidopsis. Plant Cell 6:589–600
Kent NL (1966) Subaleurone endosperm cells of high protein content. Cereal Chem 43:585–601
Knudsen S (1993) The nitrogen response of a barley C-hordein promoter is controlled by positive and negative regulation of the GCN4 and endosperm box. Plant J 4:343–355
Koch K (2004) Sucrose metabolism: regulatory mechanisms and pivotal roles in sugar sensing and plant development. Curr Opin Plant Biol 7:235–246
Kreis M, Forde BG, Rahman S, Miflin BJ, Shewry PR (1985) Molecular evolution of the seed storage proteins of barley, rye and wheat. J Mol Biol 183:499–502
Kriz AL (1999) 7S globulins of cereals. In: Shewry PR, Casey R (eds) Seed proteins. Kluwer Academic, Dordrecht, pp 477–498
Kroj T, Savino G, Valon C, Giraudat J, Parcy F (2003) Regulation of storage protein gene expression in Arabidopsis. Development 130:6065–6073
Ladin BF, Tierney ML, Meinke DW, Hosángadi P, Veith M, Beachy RN (1987) Developmental regulation of {beta}-conglycinin in soybean axes and cotyledons. Plant Physiol 84:35–41
Lamacchia C, Shewry PR, Di Fonzo N, Forsyth JL, Harris N, Lazzeri PA, Napier JA, Halford NG, Barcelo P (2001) Endosperm specific activity of a storage protein gene promoter in transgenic wheat seed. J Exp Bot 52:243–250
Lara P, Oñate-Sánchez L, Abraham Z, Ferrándiz C, Díaz I, Carbonero P, Vicente-Carbajosa J (2003) Synergistic activation of seed storage protein gene expression in Arabidopsis by ABI3 and two bZIPs related to OPAQUE2. J Biol Chem 278:21003–21011
Laroche J, Li P, Bousquet J (1995) Mitochondrial DNA and monocot-dicot divergence time. Mol Biol Evol 12:1151–1156
Le BH, Wagmaister JA, Kawashima T, Bui AQ, Harada JJ, Goldberg RB (2007) Using genomics to study legume seed development. Plant Physiol 144:562–574
Le BH, Cheng C, Bui AQ, Wagmaister JA, Henry KF, Pelletier J, Kwong L, Belmonte M, Kirkbride R, Horvath S, Drews GN, Fischer RL, Okamuro JK, Harada JJ, Goldberg RB (2010) Global analysis of gene activity during Arabidopsis seed development and identification of seed-specific transcription factors. Proc Natl Acad Sci U S A 107:8063–8070
Lending CR, Larkins BA (1989) Changes in the zein composition of protein bodies during maize endosperm development. Plant Cell 1:1011–1023
Lilley GG, Inglis AS (1986) Amino acid sequence of conglutin [delta], a sulfur-rich seed protein of Lupinus angustifolius L.: sequence homology with the C-III [alpha]-amylase inhibitor from wheat. FEBS Lett 195:235–241
Lohmer S, Maddaloni M, Motto M, Di Fonzo N, Hartings H, Salamini F, Thompson RD (1991) The maize regulatory locus Opaque-2 encodes a DNA-binding protein which activates the transcription of the b-32 gene. EMBO J 10:617–624
Lotan T, Ohto M, Yee KM, West MAL, Lo R, Kwong RW, Yamagishi K, Fischer RL, Goldberg RB, Harada JJ (1998) Arabidopsis LEAFY COTYLEDON1 is sufficient to induce embryo development in vegetative cells. Cell 93:1195–1205
Maity SN, de Crombrugghe B (1998) Role of the CCAAT-binding protein CBF/NF-Y in transcription. Trends Biochem Sci 23:174–178
Marcotte WR Jr, Russell SH, Quatrano RS (1989) Abscisic acid-responsive sequences from the em gene of wheat. Plant Cell 1:969–976
McCarty DR, Carson CB, Stinard PS, Robertson DS (1989) Molecular analysis of viviparous-1: an abscisic acid-insensitive mutant of maize. Plant Cell 1:523–532
Meinke DW, Franzmann LH, Nickle TC, Yeung EC (1994) Leafy cotyledon mutants of Arabidopsis. Plant Cell 6:1049–1064
Mena M, Vicente-Carbajosa J, Schmidt RJ, Carbonero P (1998) An endosperm-specific DOF protein from barley, highly conserved in wheat, binds to and activates transcription from prolamin-box of a native B-hordein promoter in barley endosperm. Plant J 16:53–62
Mönke G, Altschmied L, Tewes A, Reidt W, Mock HP, Bäumlein H, Conrad U (2004) Seed-specific transcription factors ABI3 and FUS3: molecular interaction with DNA. Planta 219:158–166
Moreno-Risueno MA, Gonzalez N, Diaz I, Parcy F, Carbonero P, Vicente-Carbajosa J (2008) FUSCA3 from barley unveils a common transcriptional regulation of seed-specific genes between cereals and Arabidopsis. Plant J 53:882–894
Müntz K (1998) Deposition of storage proteins. Plant Mol Biol 38:77–99
Nakamura S, Lynch TJ, Finkelstein RR (2001) Physical interactions between ABA response loci of Arabidopsis. Plant J 26:627–635
Nambara E, Marion-Poll A (2003) ABA action and interaction in seeds. Trends Plant Sci 8:213–217
Oeda K, Salinas J, Chua NH (1991) A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes. EMBO J 10:1793–1802
Ogas J, Kaufmann S, Henderson J, Somerville C (1999) PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis. Proc Natl Acad Sci U S A 96:13839–13844
Ohto MA, Fischer RL, Goldberg RB, Nakamura K, Harada JJ (2005) Control of seed mass by APETALA2. Proc Natl Acad Sci U S A 102:3123–3128
Osborne TB (1924) The vegetable proteins (2nd edn). Longmans, Green & Co, London
Parcy F, Valon C, Kohara A, Misera S, Giraudat J (1997) The ABSCISIC ACID-INSENSITIVE3, FUSCA3, and LEAFY COTYLEDON1 loci act in concert to control multiple aspects of Arabidopsis seed development. Plant Cell 9:1265–1277
Parcy F, Valon C, Raynal M, Gaubier-Comella P, Delseny M, Giraudat J (1994) Regulation of gene expression programs during Arabidopsis seed development: roles of the ABI3 locus and of endogenous abscisic acid. Plant Cell 6:1567–1582
Pla M, Vilardell J, Guiltinan MJ, Marcotte WR, Niogret MF, Quatrano RS, Pagès M (1993) The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Plant Mol Biol 21:259–266
Pysh LD, Aukerman MJ, Schmidt RJ (1993) OHP1: a maize basic domain/leucine zipper protein that interacts with Opaque2. Plant Cell 5:227–236
Reidt W, Wohlfarth T, Ellerström M, Czihal A, Tewes A, Ezcurra I, Rask L, Bäumlein H (2000) Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product. Plant J 21:401–408
Reidt W, Ellerstrom M, Kölle K, Towes A, Tiedemann J, Altschmied L, Baumlein H (2001) FUS3-dependent gene regulation during late embryogenesis. J Plant Physiol 158:411–418
Rider SD Jr, Henderson JT, Jerome RE, Edenberg HJ, Romero-Severson J, Ogas J (2003) Coordinate repression of regulators of embryonic identity by PICKLE during germination in Arabidopsis. Plant J 35:33–43
Riechmann JL, Heard J, Martin G, Reuber L, Jiang CZ, Keddie J, Adam L, Pineda O, Ratcliffe OJ, Samaha RR, Creelman R, Pilgrim M, Broun P, Zhang JZ, Ghandehari D, Sherman BK, Yu GL (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290:2105–2110
Rubio-Somoza I, Martinez M, Abraham Z, Diaz I, Carbonero P (2006) Ternary complex formation between HvMYBS3 and other factors involved in transcriptional control in barley seeds. Plant J 47:269–281
Salon C, Munier-Jolain NG, Duc G, Voisin AS, Grandgirard D, Larmure A, Emery RJN, Ney B (2001) Grain legume seed filling in relation to nitrogen acquisition: a review and prospects with particular reference to pea. Agronomie 21:539–552
Santos-Mendoza M, Dubreucq B, Miquel M, Caboche M, Lepiniec L (2005) LEAFY COTYLEDON 2 activation is sufficient to trigger the accumulation of oil and seed specific mRNAs in Arabidopsis leaves. FEBS Lett 579:4666–4670
Santos-Mendoza M, Dubreucq B, Baud S, Parcy F, Caboche M, Lepiniec L (2008) Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis. Plant J 54:608–620
Schmidt RJ, Burr FA, Aukerman MJ, Burr B (1990) Maize regulatory gene opaque-2 encodes a protein with a “leucine-zipper” motif that binds to zein DNA. Proc Natl Acad Sci U S A 87:46–50
Schmidt RJ, Ketudat M, Aukerman MJ, Hoschek G (1992) Opaque-2 is a transcriptional activator that recognizes a specific target site in 22-kD zein genes. Plant Cell 4:689–700
Shen B, Allen WB, Zheng P, Li C, Glassman K, Ranch J, Nubel D, Tarczynski MC (2010) Expression of ZmLEC1 and ZmWRI1 increases seed oil production in maize. Plant Physiol 153:980–987
Shewry PR, Halford NG (2002) Cereal seed storage proteins: structures, properties and role in grain utilization. J Exp Bot 53:947–958
Shewry PR, Tatham AS (1990) The prolamin storage proteins of cereal seeds: structure and evolution. Biochem J 267:1–12
Shewry PR, Napier JA, Tatham AS (1995) Seed storage proteins: structures and biosynthesis. Plant Cell 7:945–956
Shotwell MA (1999) Oat globulins. In: Shewry PR, Casey R (eds) Seed proteins. Kluwer Academic, Dordrecht, pp 389–400.
Shutov AD, Baumlein H, Blattner FR, Müntz K (2003) Storage and mobilization as antagonistic functional constraints on seed storage globulin evolution. J Exp Bot 54:1645–1654
Singh NK, Shepherd KW, Langridge P, Gruen LC (1991) Purification and biochemical characterization of triticin, a legumin-like protein in wheat endosperm. J Cereal Sci 13:207–219
Singh NK, Donovan GR, Carpenter HC, Skerritt JH, Langridge P (1993) Isolation and characterization of wheat triticin cDNA revealing a unique lysine-rich repetitive domain. Plant Mol Biol 22:227–237
Singh NK, Shepherd KW, Langridge P, Gruen LC, Skerritt JH, Wrigley CW (1988) Identification of legumin-like proteins in wheat. Plant Mol Biol 11:633–639
Singletary GW, Doehlert DC, Wilson CM, Muhitch MJ, Below FE (1990) Response of enzymes and storage proteins of maize endosperm to nitrogen supply. Plant Physiol 94:858–864
Smeekens S (2000) Sugar-induced signal transduction in plants. Annu Rev Plant Physiol Plant Mol Biol 51:49–81
Smith BD (1998) The emergence of agriculture. Scientific American Library, New York
Stålberg K, Ellerstöm M, Ezcurra I, Ablov S, Rask L (1996) Disruption of an overlapping E-box/ABRE motif abolished high transcription of the napA storage-protein promoter in transgenic Brassica napus seeds. Planta 199:515–519
Stöger E, Parker M, Christou P, Casey R (2001) Pea legumin overexpressed in wheat endosperm assembles into an ordered paracrystalline matrix. Plant Physiol 125:1732–1742
Stöger E, Ma JKC, Fischer R, Christou P (2005) Sowing the seeds of success: pharmaceutical proteins from plants. Curr Opin Biotechnol 16:167–173
Stöger E, Vaquero C, Torres E, Sack M, Nicholson L, Drossard J, Williams S, Keen D, Perrin Y, Christou P, Fischer R (2000) Cereal crops as viable production and storage systems for pharmaceutical scFv antibodies. Plant Mol Biol 42:583–590
Stone SL, Braybrook SA, Paula SL, Kwong LW, Meuser J, Pelletier J, Hsieh TF, Fischer RL, Goldberg RB, Harada JJ (2008) Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: implications for somatic embryogenesis. Proc Natl Acad Sci U S A 105:3151–3156
Sugliani M, Brambilla V, Clerkx EJM, Koornneef M, Soppe WJJ (2010) The conserved splicing factor SUA controls alternative splicing of the developmental regulator ABI3 in Arabidopsis. Plant Cell 22:1936–1946
Suzuki M, Kao CY, McCarty DR (1997) The conserved B3 domain of VIVIPAROUS1 has a cooperative DNA binding activity. Plant Cell 9:799–807
Suzuki A, Wu CY, Washida H, Takaiwa F (1998) Rice MYB protein OSMYB5 specifically binds to the AACA motif conserved among promoters of genes for storage protein glutelin. Plant Cell Physiol 39:555–559
Suzuki M, Kao CY, Cocciolone S, McCarty DR (2001) Maize VP1 complements Arabidopsis abi3 and confers a novel ABA/auxin interaction in roots. Plant J 28:409–418
Suzuki M, Ketterling MG, Li QB, McCarty DR (2003) Viviparous1 alters global gene expression patterns through regulation of abscisic acid signaling. Plant Physiol 132:1664–1677
Suzuki M, Wang HHY, McCarty DR (2007) Repression of the LEAFY COTYLEDON 1/B3 regulatory network in plant embryo development by VP1/ABSCISIC ACID INSENSITIVE 3-LIKE B3 genes. Plant Physiol 143:902–911
Takaiwa F, Ogawa M, Okita TW (1999) Rice glutelins. In: Shewry PR, Casey R (eds) Seed proteins. Kluwer Academic, Dordrecht, pp 401–425
Tegeder M, Wang XD, Frommer WB, Offler CE, Patrick JW (1999) Sucrose transport into developing seeds of Pisum sativum L. Plant J 18:151–161
To A, Valon C, Savino G, Guilleminot J, Devic M, Giraudat J, Parcy F (2006) A network of local and redundant gene regulation governs Arabidopsis seed maturation. Plant Cell 18:1642–1651
Tsukagoshi H, Morikami A, Nakamura K (2007) Two B3 domain transcriptional repressors prevent sugar-inducible expression of seed maturation genes in Arabidopsis seedlings. Proc Natl Acad Sci U S A 104:2543–2547
Twyman RM, Stoger E, Schillberg S, Christou P, Fischer R (2003) Molecular farming in plants: host systems and expression technology. Trends Biotechnol 21:570–578
Tzitzikas EN, Vincken JP, de Groot J, Gruppen H, Visser RGF (2006) Genetic variation in pea seed globulin composition. J Agric Food Chem 54:425–433
Vasil V, Marcotte WR Jr, Rosenkrans L, Cocciolone SM, Vasil IK, Quatrano RS, McCarty DR (1995) Overlap of viviparous1 (VP1) and abscisic acid response elements in the em promoter: G-box elements are sufficient but not necessary for VP1 transactivation. Plant Cell 7:1511–1518
Verdier J, Kakar K, Gallardo K, Le Signor C, Aubert G, Schlereth A, Town CD, Udvardi MK, Thompson RD (2008) Gene expression profiling of M. truncatula transcription factors identifies putative regulators of grain legume seed filling. Plant Mol Biol 67:567–580
Verdier J, Kakar K, Gallardo K, Le Signor C, Aubert G, Schlereth A, Town CD, Udvardi MK, Thompson RD (2008) Gene expression profiling of M. truncatula transcription factors identifies putative regulators of grain legume seed filling. Plant Mol Biol 67:567–580
Verdier J, Thompson RD (2008) Transcriptional regulation of storage protein synthesis during dicotyledon seed filling. Plant Cell Physiol 49:1263–1271
Vicente-Carbajosa J, Moose SP, Parsons RL, Schmidt RJ (1997) A maize zinc-finger protein binds the prolamin box in zein gene promoters interacts with the basic leucine zipper transcriptional activator Opaque2. Proc Natl Acad Sci U S A 94:7685–7690
Vigeolas H, van Dongen JT, Waldeck P, Huhn D, Geigenberger P (2003) Lipid storage metabolism is limited by the prevailing low oxygen concentrations within developing seeds of oilseed rape. Plant Physiol 133:2048–2060
Wang GF, Wang H, Zhu J, Zhang J, Zhang XW, Wang F, Tang YP, Mei B, Xu ZK, Song RT (2010) An expression analysis of 57 transcription factors derived from ESTs of developing seeds in maize (Zea mays). Plant Cell Rep 29:545–559
Wang TL, Domoney C, Hedley CL, Casey R, Grusak MA (2003) Can we improve the nutritional quality of legume seeds? Plant Physiol 131:886–891
Weber H, Borisjuk L, Wobus U (1997) Sugar import and metabolism during seed development. Trends Plant Sci 2:169–174
Weber H, Borisjuk L, Wobus U (2005) Molecular physiology of legume seed development. Annu Rev Plant Biol 56:253–279
Weichert N, Saalbach I, Weichert H, Kohl S, Erban A, Kopka J, Hause B, Varshney A, Sreenivasulu N, Strickert M, Kumlehn J, Weschke W, Weber H (2010) Increasing sucrose uptake capacity of wheat grains stimulates storage protein synthesis. Plant Physiol 152:698–710
Weschke W, Panitz R, Sauer N, Wang Q, Neubohn B, Weber H, Wobus U (2000) Sucrose transport into barley seeds: molecular characterization of two transporters and implications for seed development and starch accumulation. Plant J 21:455–467
West M, Yee KM, Danao J, Zimmerman JL, Fischer RL, Goldberg RB, Harada JJ (1994) LEAFY COTYLEDON1 is an essential regulator of late embryogenesis and cotyledon identity in Arabidopsis. Plant Cell 6:1731–1745
Wilkinson M, Lenton J, Holdsworth M (2005) Transcripts of Vp-1 homoeologues are alternatively spliced within the Triticeae tribe. Euphytica 143:243–246
Williams BA, Tsang A (1992) Nucleotide sequence of an abscisic acid-responsive, embryo-specific maize gene. Plant Physiol 100:1067–1068
Wolfe KH, Gouy M, Yang YW, Sharp PM, Li WH (1989) Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. Proc Natl Acad Sci U S A 86:6201–6205
Wu CY, Suzuki A, Washida H, Takaiwa F (1998) The GCN4 motif in a rice glutelin gene is essential for endosperm-specific gene expression and is activated by Opaque2 in transgenic rice plants. Plant J 14:673–683
Wu CY, Washida H, Onodera Y, Harada K, Takaiwa F (2000) Quantitative nature of the prolamin-box, ACGT and AACA motifs in a rice glutelin gene promoter: minimal cis-element requirements for endosperm-specific gene expression. Plant J 23:415–421
Xue LJ, Zhang JJ, Xue HW (2009) Characterization and expression profiles of miRNAs in rice seeds. Nucl Acids Res 37:916–930
Yamamoto MP, Onodera Y, Touno SM, Takaiwa F (2006) Synergism between RPBF Dof and RISBZ1 bZIP activators in the regulation of rice seed expression genes. Plant Physiol 141:1694–1707
Yang X, Tuskan GA, Cheng MZM (2006) Divergence of the Dof gene families in poplar, Arabidopsis, and rice suggests multiple modes of gene evolution after duplication. Plant Physiol 142:820–830
Yasuda H, Tada Y, Hayashi Y, Jomori T, Takaiwa F (2005) Expression of the small peptide GLP-1 in transgenic plants. Transgenic Res 14:677–684
Ye X, Al-Babili S, Klöti A, Zhang J, Lucca P, Beyer P, Potrykus I (2000) Engineering the provitamin A (b-carotene) biosynthetic pathway into (carotenoid-free) rice endosperm. Science 287:303–305
Yoshihara T, Takaiwa F (1996) Cis-regulatory elements responsible for quantitative regulation of the rice seed storage protein glutelin GluA-3 gene. Plant Cell Physiol 37:107–111
Yupsanis T, Burgess SR, Jackson PJ, Shewry PR (1990) Characterization of the major protein component from aleurone cells of barley (Hordeum vulgare L.). J Exp Bot 41:385–392
Zhang H, Ogas J (2009) An epigenetic perspective on developmental regulation of seed genes. Mol Plant 2:610–627
Zheng Z, Kawagoe Y, Xiao S, Li Z, Okita T, Hau TL, Lin A, Murai N (1993) 5’ distal and proximal cis-acting regulator elements are required for developmental control of a rice seed storage protein glutelin gene. Plant J 4:357–366
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Thompson, R.D., Verdier, J. (2012). Networks of Seed Storage Protein Regulation in Cereals and Legumes at the Dawn of the Omics Era. In: Agrawal, G., Rakwal, R. (eds) Seed Development: OMICS Technologies toward Improvement of Seed Quality and Crop Yield. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-4749-4_11
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