Abstract
The date palm (Phoenix dactylifera L) is a monocotyledoneus woody perennial and dioecious plant with a long generation life time. Traditional and modern genetic improvement in date palm need long time and considerable funds. The molecular markers can assist the selection and give better and efficient research strategies. Several researches cited in this overview paper showed the use molecular markers as tools to evaluate genetic diversity and genotyping of date palm cultivars. Based on statistical analysis, some informative molecular markers which are associated to some phenological characters in date palm. Previous study of the date-palm mitochondrial DNA had evidenced two plasmid-like DNAs that seem to be linked to resistance to Bayoud disease but these markers cannot distinguish both studied cultivars. The research using several hundred RAPD and ISSR primers allowed identifying several markers candidates which can distinguish partially or totally between resistant and susceptible cultivars of date palm. The difficulty and relatively weak efficiency were probably due to the nature of genetic status of resistance. These preliminary researches open new doors to explore in the use of molecular technologies in the development of programme breeding of date palm in order to select rapidly new varieties desired by farmers and more demanded by different markets. They also may give area in research and construction programme of date palm genetic map.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Aît Chitt M, Mantell SH, Thangavelu M, Ainsworth CC (1995) Cloning date palm (Phoenix dactylifera L.) DNA and characterization of low, medium and high copy DNA sequences. Elaeis 1:57–63
Adawy S, Hussein E, El-Khishin D et al (2002) Genetic variability studies and molecular fingerprinting of some Egyptian date palm (Phoenix dactylîfera L.) cultivars. II-RAPD and ISSR profiling. Arab J Biotechnol 5:225–236
Adawy SS, Hussein E, Ebtissam HA et al (2005) Genomic diversity in date palm (Phoenix dactylifera L.) as revealed by AFLP in comparison to RAPDs and ISSRs. Arab J Biotechnol 8:99–114
Ajibade SR, Weeden NF, Chite SM (2000) Inter simple sequence repeat analysis of genetic relationships in the genus Vigna. Euphytica 111:47–55
Akkaya M, Bhagwat AA, Cregan PB (1992) Length polymorphisms of simple séquence repeat DNA in soybean. Genetics 132:1131–1139
Baaziz M (1990) Contribution à l’étude des peroxydases du palmier dattier (Phoenix dactylifera L.). Relations avec la résistance de la plante à la maladie du bayoud, fusariose vasculaire à Fusarium oxysporum f.sp. albedinis. Thèse de Doctorat d’Etat, Université Cadi Ayed, Faculté des Sciences Sémlalia, Marrakech, Maroc, 173 p
Bendiab K, Baaziz M, Brakez Z, Sedra MyH (1993) Correlation of isoenzyme polymorphism and bayoud-disease resistance in date palm cultivars and progeny. Euphytica 65:23–32
Ben Saleh M, El-Helaly R (2003) Using ISSR to investigate the similarities and dissimilarities between some Tunisian date palm (Phoenix dactylifera L.) cultivars. (in Arabic and abstract in English). International Conference on Date Palm, Kingdom of Saudia Arabia, 16–19 Sept 2003
Bennaceur M, Lanaud C, Chevalier MH, Bounaga N (1991) Genetic diversity of date-palm (Phoenix dactylifera L.) from Algeria detected by enzyme markers. Plant Breed 107:56–69
Benslimane AA (1995) Plasmides mitochondriaux du palmier dattier (Phoenix dactylifera L.). Mise en évidence et caractérisation moléculaire. Thèse de Doctorat d’Etat, Université Cadi Ayed, Faculté des Sciences Semlalia, Marrakech, Maroc, 219 p
Benslimane AA, Rode A, Quetier F, Hartmann C (1994) Characterization of two minicircular plasmide-like DNAs isolated from date-palm mitochondria. Curr Genet 26:535–541
Benslimane AA, Hartmann C, Ouenzar B, Rode A (1996) Intramolecular recombination of a mitochondrial minicircular plasmide-like DNA of a date-palm mediated by a set of short direct repeat sequences. Curr Genet 29:591–593
Blears MJ, De Grandis SA, Lee H, Trevors JT (1998) Amplified fragment length polymorphism (AFLP): a review of the procedure and its applications. J Ind Microbiol Biotechnol 21:99–114
Botstein D, White RL, Skolnick MH, Davis RW (1980) Construction of a genetic map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314–331
Cao BR, Chao CCT (2002) Identification of date cultivars in California using AFLP markers. Hort Sci 37:966–968
Djerbi M, Sedra MyH (1986) Résistance to Fusarium oxysporum f.sp. albedinis in Phoenix dactylifera: Evaluation of new screening method and performance of american high quality backcrossed males. Proceeding of the Second Symposium on the Date Palm. March 3-6/1986, Date Palm Research Center, King Faisal University, El-Hassa, Saoudi Arabia, pp 400–412
Djerbi M, Aouad L, El Filali H et al. (1986) Preliminary results on selection of high quality Bayoud resistant lines among natural date palm population in Morocco. Proceeding of the second symposium on the date palm. Mar 3-6/1986, Date Palm Research Center, King Faisal University, El-Hassa, Saoudi Arabia, pp 386–399
Corniquel B, Mercier L (1994) Date palm (Phoenix dactylifera L.) cultivar identification by RFLP and RAPD. Plant Sci 101:163–172
Cullis C, Rademan S, Kunert KJ (1999) Method for finding genetic markers of somaclonal variation. International publication number WO 99/53100
Diaz S, Pire C, Ferrer J, Bonete MJ (2003) Identification of Phoenix dactylifera L. varieties based on amplified fragment length polymorphism (AFLP) markers. Cell Mol Biol Lett 8:891–899
El Hadrami I, Ramos T, Macheix JJ (1996) Caractérisation de nouveaux dérivés hydroxycinnamiques amines chez Phoenix dactylifera L.: relation avec le brunissement des tissus et la résistance des cultivars au bayoud. Polyphénols Communications 2:341–342
El Idrissi-Tourane A, Ramos T, El Bellaj M, El Hadrami I (1996) Importance des phénolamides et des polyamines des racines du palmier dattier dans la résistance/sensibilité au Bayoud. Polyphénols Communications 2:371–372
Fang DQ, Roose ML (1997) Identification of closely related Citrus cultivars with inter-simple sequence repeat markers. Theor Appl Genet 95:8–417
Fang DQ, Roose ML, Krueger RR, Federici CT (1997) Fingerprinting trifoliate orange germplasm accessions with isozymes, RFLPs, and inter-simple sequence repeat markers. Theor Appl Genet 95:211–219
Fang DQ, Roose ML (1999) Inheritance of inter simple sequence repeat markers in Citrus. J Hered 90:247–249
Flamand MC, Duc G, Goblet JP et al (1993) Variant mitochondrial plasmids of broad bean arose by recombination and are controlled by the nuclear genome. Nucl Acids Res 21:5468–5473
Gupta M, Chyi Y-S, Romeo-Severson J, Owen JL (1994) Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats. Theor Appl Genet 89:998–1006
Hu J, Quiros CF (1991) Identification of broccoli and cauliflower cultivars with RAPD markers. Plant Cell Rep 10:505–511
Koller B, Lehmann A, McDermott JM, Gessler C (1993) Identification of apple cultivars using RAPD markers. Theor Appl Genet 85:901–904
Lacaze P, Brackpool A (2000) Molecular fingerprinting of date palm cultivars using AFLP. Date Palm International Symposium. Windhoek, Namibia, 22–25 Feb 2000
Louvet J, Toutain G (1973) Recherches sur les fusarioses VII. Nouvelles observations sur la fusariose du palmier dattier et précisions concernant la lutte. Ann Phytopathol 5:35–52
Moore HE (1973) The major groups of palms and their distributions. Ferites herbarium 1:27–141
Morgante M, Oliviery AM (1993) PCR-amplified microsatellites as markers in plant genetics. Plant J 1:175–182
Mossler A, Egger KN, Hughes GA (1992) Low levels of genetic diversity in red pive confirmed by random amplified polymorphic DNA markers. Can J For Res 22:1332–1337
Nei M, Li WH (1979) Mathematical models for studying genetic variation in ternis of restriction endonucleases. Proc Natl Acad Sci USA 76:5269–5273
Powell W, Morgante M, Andre C, Hanafey M, Vogel J, Tingey S, Rafalski A (1996) The comparison of RFLP, RAPD, AFLP, and SSR microsatellite markers for germplasm analysis. Mol Breed 2:225–238
Rival A, Tregear J, Verdeil JL et al (1998) Molecular search for mRNA and genomic markers of the oil palm “mantled” somaclonal variations. Acta Hort 461:165–171
Saaidi M (1992) Comportement au champ de 32 cultivars de palmier dattier vis à vis du bayoud: 25 années d’observations. Agronomie 12:359–370
Saaidi M, Bannerot TG, Louvet J (1981) La sélection du Palmier-dattier (Phoenix dactylifera L.) pour la résistance au Bayoud. Fruits 36:241–249
Saker MM, Moursy HA (1999) Molecular characterization of Egyptian date palm: II – RAPD Fingerprints. Arab J Biotechnol 2:71–78
Saker MM, Bekheet SA, Taha HS et al. (2000) Detection of somaclonal variations in tissue culture-derived date palm plants using isozyme analysis and RAPD fingerprints. Date palm international symposium. Windhoek, Namibia. 22–25 Feb 2000
Saker MM, Adawy SS, Mohamed AA, El-Itriby HA (2006) Monitoring of cultivar identity in tissue culture-derived date palms using RAPD and AFLP analysis. Biol Plant 50:198–204
Sanchez De La Hoz MP, Davalia JA, Loarce Y, Ferrer E (1996) Simple sequence repeat primers used in polymerase chain reaction amplification to study genetic diversity in barley. Genome 39:112–117
Sedra MyH (1990a) Preliminary results on the evaluation of the resistance of the Bayoud of the clones (Khalts), cultivars and some hybrids of the date palm trees selected on the fruit quality criterium. 8th congress or Mediterranean Phytopathological Union, Agadir Morocco, pp 529
Sedra MyH (1990b) Observations on some phenotypical criteria that are eventually in relation with the date palm tree resistance to Bayoud. 8th congress of the Mediterranean Phytopathological Union, 28 Oct 3 Nov 1990, Agadir, Maroc
Sedra MyH (1992) Evaluation and selection of the resistant good cultivars and clones of date palm to the Bayoud disease. Arab Society for Plant Protection 10(2):155–160
Sedra MyH (1993) Lutte contre le Bayoud, fusariose vasculaire du palmier dattier causée par Fusarium oxysporum f.sp. albedinis : sélection des cultivars et clones de qualité résistants et réceptivité des sols de palmeraies à la maladie. Thèse de Doctorat d’Etat es-Sciences, Fac. Sc., Sémlalia, Marrakech, Maroc, 142 p
Sedra MyH (1994a) Mise au point d’une méthode pour l’évaluation rapide de la resistance au Bayoud de plantules du palmier dattier issues de semis. INRA-Rabat Maroc. Al Awamia 86:21–41
Sedra MyH (1994b) Evaluation de la résistance à la maladie du Bayoud causé par Fusarium oxysporum f.sp. albedinis chez le palmier dattier: Recherche d’une méthode fiable d’inoculation expérimentale en pépinière et en plantation. Agronomie 14:445–452
Sedra MyH (1995) Triage d’une collection de génotypes de palmier dattier pour la résistance au Bayoud causé par Fusarium oxysporum f.sp. albedinis. INRA-Rabat Maroc. Al Awamia 90:9–18
Sedra MyH (1997) Diversité et amélioration génétique du patrimoine phénicicole marocain. Proceeding du Séminaire National sur “Ressources Phytogénétiques et Développement Durable” Actes Editions IVA Hassan II, Rabat, pp 283–308
Sedra MyH (2000) Biological and genetic characteristics of Bayoud resistant Moroccan date palm cultivars and strains. Agric Water 20:55–66
Sedra MyH (2001) Descripteurs du palmier dattier (Phoenix dactilyfera L.). Edit. INRA Maroc, Imprimerie Al Watania-Marrakech Maroc), 135 p
Sedra MyH (2003a) Le Bayoud du palmier dattier en Afrique du Nord, FAO, RNE/SNEA-Tunis. Editions FAO sur la protection des plantes. Imprimerie Signes,Tunis, Tunisie, 125 p
Sedra MyH (2003b) Le Palmier Dattier base de la mise en valeur des oasis au Maroc. Techniques phoénicicoles et Création d’oasis. Edit. INRA Maroc, Imprimerie Al Watania-Marrakech Maroc, 276 p
Sedra MyH (2003c) Date palm cultivation, characterization and classification of main Mauritanian varieties. Edition AOAD, Al-Khartoum, Sudan, 261 p
Sedra MyH (2005a) Caractérisation des clones sélectionnés du palmier dattier et prometteurs pour combattre la maladie du Bayoud. The international symposium: sustainable agricultural development of oasian systems. March 07–10 2005, Erfoud Morocco
Sedra MyH (2005b) Phenological descriptors and molecular markers for the determination of true-to-type of tissue culture-derived plants using organogenesis of some Moroccan date palm (Phoenix dactilyfera L.) Varieties. INRA-Rabat Maroc. Al Awamia 113:87–101
Sedra MyH (2007a) Discovery of Bayoud disease on date palm tree in Mauritania: its importance, kind and control strategies. Proceeding of the fourth symposium on Date Palm King Faisal University, Hofuf, 5–8 May 2007, Kingdom of Saudi Arabia
Sedra MyH (2007b) Bayoud disease of date palm in North Africa: recent distribution and remarks about its characterization, diagnosis and origin. Proceeding of the fourth symposium on Date Palm King Faisal University, Hofuf, 5–8 May 2007, Kingdom of Saudi Arabia
Sedra MyH (2007c) Selection of morphological characteristics and molecular markers and their use for identification and distinguishing between date palm varieties and the plants issued from tissue culture. Proceeding of the fourth symposium on Date Palm King Faisal University, Hofuf, 5–8 May 2007, Kingdom of Saudi Arabia
Sedra MyH, Besri M (1994) Evaluation de la résistance au Bayoud du palmier dattier causé par Fusarium oxysporum f.sp. albedinis: Recherche d’une méthode de discrimination des vitroplants acclimatés en serre. Agronomie 14:467–472
Sedra MyH and Zhar N (2010) Genetic variability analysis of populations of Fusarium oxysporum f. sp. albedinis, causal agent of Bayoud disease of date palm and other Fusarium oxysporum using molecular techniques. (Proc. 4th Int Date Palm conference United Arab Emirates, Abu Dhabi). ACTA Hort 882:491–504
Sedra MyH, El Fakhouri R, Lazrek HB (1993) Recherche d’une méthode fiable pour l’évaluation de l’effet des toxines secrétées par Fusarium oxysporum f.sp.albedinis sur le palmier dattier. INRA-Rabat Maroc. Al Awamia 82:89–104
Sedra MyH, El Filali H, Benzine M et al (1996) La palmeraie dattière marocaine: Evaluation du patrimoine phoénicicole. Fruits 51:247–259
Sedra MyH, Lashermes P, Trouslot P et al (1998) Identification and genetic diversity analysis of date palm (Phoenix dactylifera L.) varieties from Morocco using RAPD markers. Euphyt 103:75–82
Scribner KT, Pearce JM (2000) Microsatellites: evolutionary and methodological background and empirical applications at individual, population, and phylogenetic levels. In: Baker A (ed) Molecular methods in ecology. Blackwell Science, London, pp 235–271
Soliman SS, Ali BA, Ahmed MMM (2003) Genetic comparisons of Egyptian date palm cultivars (Phoenix dactylifera L.) by RAPD-PCR. Afr J Biotechnol 2:86–87
Stepansky A, Kovalski I, Perl-Treves R (1999) Intraspecific classification of melons (Cucumis melo L.) in view of their phenotypic and molecular variation. Plant Syst Evol 217:313–332
Trifi M (2001) Polymorphisme et typage moléculaire de variétés tunisiennes de palmier dattier (Phoenix dactylifera L.): relation avec la résistance au bayoud. Thèse de Doctorat d’Etat, Université de Tunis El Manar, Faculté des Sciences de Tunis, Tunisie, 141 p
Trifi M, Rhouma A, Marrakchi M (2000) Phylogenetic relationships in Tunisian date-palm (Phoenix dactylifera L.) germplasm collection using DNA amplification fingerprinting. Agronomie 20:665–671
Vos P, Hogers R, Bleeker M, Reijans M et al (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407–4414
Williams JGK, Kubelik AR, Livak KJ et al (1990) DNA polymorphïsm amplified primers are useful as genetic markers. Nucleic Acids Res 18:6531–6535
Wolff K, Van Run JP (1993) Rapid detection of genetic variability in chrysanthemum (Dendranthema grandiflora Tzvelev) using random primers. Heredity 71:335–341
Yang X, Quiros C (1993) Identification and classification of celery cultivars with RAPD markers. Theor Appl Genet 86:205–212
Acknowledgements
Thanks are due to my research institution (Moroccan INRA) and other international institutions and organizations (IAEA, AOAD, ICGEB, FAO, IFS, IFAD, IBD, ACSAD, IRD and other partners) for help and funding support and to all the individuals who helped from near and far: laboratory technicians, training people and students and the INRA-Zagora experimental station staff.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2011 Springer Science+Business Media B.V.
About this chapter
Cite this chapter
Sedra, M. (2011). Molecular Markers for Genetic Diversity and Bayoud Disease Resistance in Date Palm. In: Jain, S., Al-Khayri, J., Johnson, D. (eds) Date Palm Biotechnology. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-1318-5_25
Download citation
DOI: https://doi.org/10.1007/978-94-007-1318-5_25
Published:
Publisher Name: Springer, Dordrecht
Print ISBN: 978-94-007-1317-8
Online ISBN: 978-94-007-1318-5
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)