Abstract
In situ hybridization (ISH) associated to immunohistochemistry has become a powerful tool for the examination of gene expression. Application of these techniques in grapevine tissues is limited mainly because of technical difficulties with this plant material. Here we present detailed protocols for ISH and immunohistochemistry, recommended controls and troubleshooting, along with examples of several applications to grapevine tissues.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Abbreviations
- AP:
-
Alkaline phosphatase
- DIG:
-
Digoxigenine
- GS primer:
-
Gene specific primer
- ISH:
-
In situ hybridization
- NTE:
-
NaCl-Tris-EDTA buffer
- PAL:
-
Phenylalanine ammonia-lyase
- PBS:
-
Phosphate buffer saline
- Rib:
-
26S ribosomic RNA
- SSC:
-
Saline sodium citrate
- STS:
-
Stilbene synthase
References
Bravo JM, Campo S, Murillo I, Coca M, San Segundo B (2003) Fungus- and wound-induced accumulation of mRNA containing a class II chitinase of the pathogenesis-related protein 4 (PR-4) family of maize. Plant Mol Biol 52:745–759
Brugeon J (1996) In situ hybridization to RNA in plant biology. In: Nicole M, Gianinazzi-Pearson V (eds) Histology, ultrastructure and molecular cytology of plant – microorganism interactions. Kluwer Academic Publishers, The Netherlands
Burger AL, Zwiegelaar JP, Botha FC (2004) Characterisation of the gene encoding the Merlot ripening-induced protein 1 (mrip 1): evidence that this putative protein is a distinct member of the plant proline-rich protein family. Plant Sci 167:1075–1089
Cadot Y, Miñana-Castelló MT, Chevalier M (2006) Anatomical, histological, and histochemical changes in grape seeds from Vitis vinifera L. cv Cabernet franc during fruit development. J Agric Food Chem 54:9206–9215
Carmona MJ, Cubas P, Martinez-Zapater JM (2002) VFL, the grapevine Floricaula/Leafy ortholog, is expressed in meristematic regions independently of their fate. Plant Physiol 130:68–77
Cox KH, Goldberg RB (1988) Analysis of plant gene expression. In: Shaw CH (ed) Plant molecular biology: a practical approach. Oxford IRL Press, Oxford
Diakou P, Carde JP (2001) In situ fixation of grape berries. Protoplasma 218:225–235
Derckel JP, Audran JC, Haye B, Lambert B, Legendre L (1998) Characterization, induction by wounding and salicylic acid, and activity against Botrytis cinerea of chitinases and β-1,3-glucanases of ripening grape berries. Physiol Plant 104:56–64
Famiani F, Walker RP, Técsi L, Chen ZH, Proietti P, Leegood RC (2000) An immunohistochemical study of the compartmentation of metabolism during the development of grape (Vitis vinifera L.) berries. J Exp Bot 345:675–683
Fernandez L, Torregrosa L, Terrier N, Sreekantan L, Grimplet J, Davies C, Thomas MR, Romieu C, Ageorges A (2007) Identification of genes associated with flesh morphogenesis during grapevine fruit development. Plant Mol Biol 63:307–323
Fouquet R, Léon C, Ollat N, Barrieu F (2008) Identification of grapevine aquaporins and expression analysis in developing berries. Plant Cell Rep 27:1541–1550
Jacobs AK, Dry IB, Robinson SP (1999) Induction of different pathogenesis-related cDNAs in grapevine infected with powdery mildew and treated with etephon. Plant Pathology 48:325–336.
Jackson DI, Coombe BG (1995) Early bunchstem necrosis-a matter of nomenclature. Am. J Enol Vit 46:579–580
Lebon G, Duchêne E, Brun O, Clément C (2005) Phenology of flowering and starch accumulation in grape (Vitis vinifera L.) cuttings and vines. Ann Bot 95:943–948
Meier U (2001) Grapevine. In: Meier U (ed) Growth stages of mono- and dicotyledonous plants. BBCH monograph, federal biological research centre for agriculture and forestry. Blackwell Wissenschafts-verlag, Berlin
Reinold S, Halbrock K (1996) Biphasic temporal and spatial induction patterns of defense-related mRNAs and proteins in fungus-infected parsley leaves. Plant Physiol 112:131–140
Suzuki T, Akimoto M, Mandai M, Takahashi M, Yoshimura N (2005) A new PCR-based approach for the preparation of RNA probe. Biochem Biophysic Methods 62:251–258
Tavares LS, de O Santos M, Viccini LF, Moreira JS, Miller RNG, Franco OL (2008) Biotechnological potential of antimicrobial peptides from flowers. Peptides 29:1842–1851
Vandeleur RK, Mayo G, Shelden MC, Gilliham M, Kaiser BN, Tyerman SD (2009) The role of plasma membrane intrinsic protein aquaporins in water transport through roots: diurnal and drought stress responses reveal different strategies between isohydric and anisohydric cultivars of grapevine. Plant Physiol 149:445–460
Vignault C, Vachaud M, Cakir B, Glissant D, Dedaldechamp F, Buttner M, Atanassova R, Fleurat-Lessard P, Lemoine R, Delrot S (2005) VvHT1 encodes a monosaccharide transporter expressed in the conducting complex of the grape berry phloem. J Exp Bot 56:1409–1418
Walker RP, Chen ZH, Técsi L, Famiani F, Lea PJ, Leegood RC (1999) Phosphoenolpyruvate carboxykinase plays a role in interactions of carbon and nitrogen metabolism during grape seed development. Planta 210:9–18
Acknowledgments
The authors thank the EMOA laboratory UMR INRA FARE 614 Reims for giving us access to their confocal equipment.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2010 Springer Science+Business Media B.V.
About this chapter
Cite this chapter
Colas, S. et al. (2010). Expression Analysis in Grapevine by In Situ Hybridization and Immunohistochemistry. In: Delrot, S., Medrano, H., Or, E., Bavaresco, L., Grando, S. (eds) Methodologies and Results in Grapevine Research. Springer, Dordrecht. https://doi.org/10.1007/978-90-481-9283-0_26
Download citation
DOI: https://doi.org/10.1007/978-90-481-9283-0_26
Published:
Publisher Name: Springer, Dordrecht
Print ISBN: 978-90-481-9282-3
Online ISBN: 978-90-481-9283-0
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)