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Structural Analyses of the Mode of Binding Between AANAT Protein with 14-3-3 Protein Involved in Human Melatonin Synthesis

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Information Systems Design and Intelligent Applications

Part of the book series: Advances in Intelligent Systems and Computing ((AISC,volume 340))

Abstract

Arylalkylamine N-acetyltransferase (AANAT) or Serotonin N-acetyltransferase is one of the key enzymes for the synthesis of melatonin in humans. In the process, the regular binding partner of this AANAT protein is 14-3-3 protein. A mutation of A129T in the AANAT protein leads to decreased functionality of the AANAT protein. So far the mechanistic details of this loss of binding have not been elucidated. In the present work, we tried to utilize structural bioinformatic approach to understand the differences in pattern of bindings between AANAT wild type and mutant forms. We used molecular mechanics calculations to describe the interactions of wild type and mutant AANAT proteins with its binding partner 14-3-3 proteins. So far, this is the first report that characterizes the difference in binding between the two forms of the protein. Therefore, the results from this study may be useful for the development of drugs in patients having impaired melatonin synthesis.

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References

  1. Bagchi, A., Mortb, M., Lic, B., Xind, F., Carlisec, C., Oronc, T., Powellc, C., Youne, E., Radivojacd, P., Cooperb, D.N., Mooneyc, S.D.: Analysis of features from protein-protein hetero-complex structures to predict protein interaction interfaces using machine learning: CIMTA. Procedia Technol. 10, 62–66 (2013)

    Article  Google Scholar 

  2. Ganguly, S., Weller, J.L., Ho, A., Chemineau, P., Malpaux, B., Klein, D.C.: Melatonin synthesis: 14-3-3-dependent activation and inhibition of arylalkylamine N-acetyltransferase mediated by phosphoserine-205. Proc. Natl. Acad. Sci. USA 102(4), 1222–1227 (2005)

    Article  Google Scholar 

  3. Hickman, A.B., Klein, D.C., Dyda, F.: Melatonin biosynthesis: the structure of serotonin N-acetyltransferase at 2.5 Å resolution suggests a catalytic mechanism. Mol. Cell 1, 23–32 (1999)

    Article  Google Scholar 

  4. Blomeke, B., Golka, K., Griefahn, B., Roemer, H.C.: Arylalkylamine N-acetyltransferase (AANAT) genotype as a personal trait in melatonin synthesis. J. Toxicol Environ. Health A 71(13–14), 874–876 (2008)

    Article  Google Scholar 

  5. Bijlenga, D., Van Someren, E.J., Gruber, R., Bron, T.I., Kruithof, I.F., Spanbroek, E.C., Kooij, J.J.: Body temperature, activity and melatonin profiles in adults with attention-deficit/hyperactivity disorder and delayed sleep: a case-control study. J. Sleep Res. 6, 607–616 (2013)

    Article  Google Scholar 

  6. Fu, H., Subramanian, R.R., Masters, S.C.: 14-3-3 PROTEINS: structure, function, and regulation. Ann. Rev. Pharmacol. Toxicol. 40, 617–647 (2000)

    Article  Google Scholar 

  7. http://www.rcsb.org

  8. http://www.uniprot.org/docs/humsavar

  9. Wolf, E., De Angelis, J., Khalil, E.M., Cole, P.A., Burley, S.K.: X-ray crystallographic studies of serotonin N-acetyltransferase catalysis and inhibition. J. Mol. Biol. 317(2), 215–224 (2002)

    Article  Google Scholar 

  10. Choong, Y.S., Tye, G.J., Lim, T.S.: Minireview: applied structural bioinformatics in proteomics. Protein J. 32, 505–511 (2013)

    Article  Google Scholar 

  11. Cukuroglu, E., Engin, E.H., Gursoy, A., Keskin, O.: Hot spots in protein-protein interfaces: towards drug discovery. Prog. Biophys. Mol. Biol., 1–9 (2014)

    Google Scholar 

  12. Rao, S.V., Srinivas, K., Sujini, G.N., Sunand Kumar, G.N.: Protein-protein interaction detection: methods and analysis. Int. J. Proteomics 2014, Article ID 147648 (2014)

    Google Scholar 

  13. Sudha, G., Nussinov, R., Srinivasan, N.: An overview of recent advances in structural bioinformatics of protein-protein interactions and a guide to their principles. Prog. Biophys. Mol. Biol. 116(2), 141–150 (2014)

    Article  Google Scholar 

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Acknowledgment

The authors would like to thank the DST-PURSE program 2012-2015 going on in the Department of Biochemistry and Biophysics, University of Kalyani for providing different instrumental and infrastructural support. The authors are also thankful to the DBT sponsored Bioinformatics Infrastructure Facility in the Department of Bio-chemistry and Biophysics, University of Kalyani for the necessary support.

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Correspondence to Angshuman Bagchi .

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Ali, A., Bhattacharjee, S., Bagchi, A. (2015). Structural Analyses of the Mode of Binding Between AANAT Protein with 14-3-3 Protein Involved in Human Melatonin Synthesis. In: Mandal, J., Satapathy, S., Kumar Sanyal, M., Sarkar, P., Mukhopadhyay, A. (eds) Information Systems Design and Intelligent Applications. Advances in Intelligent Systems and Computing, vol 340. Springer, New Delhi. https://doi.org/10.1007/978-81-322-2247-7_14

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  • DOI: https://doi.org/10.1007/978-81-322-2247-7_14

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  • Print ISBN: 978-81-322-2246-0

  • Online ISBN: 978-81-322-2247-7

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