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Duplicated Gene Evolution of the Primate Alcohol Dehydrogenase Family

  • Hiroki Oota
  • Hiroki Oota
  • Kenneth K. Kidd
Chapter
Part of the Primatology Monographs book series (PrimMono)

Abstract

The mammalian alcohol dehydrogenase (ADH: EC1.1.1.1) enzymes metabolize a wide range of alcohol and carbonyl compounds. The ADH enzyme family is classified into five classes (I–V) based on biochemical properties and nucleotide/amino acid sequence similarity. Each class of ADH shares 60–70% sequence similarity with other classes of ADH in the same species, and ADHs within the same class in the same species share more than 80% sequence similarity. The high similarity among ADHs suggests that their genes have evolved by multiple duplications. Previous studies based on Southern hybridization data have identified copy number variation of Class I ADH genes in mammals: the mouse has only one Class I gene, some other mammals have two genes, whereas all primates examined have at least three Class I genes. Our previous study showed that great apes (human, chimpanzee, bonobo, gorilla, orangutan) and Old World monkeys (baboon) have three or more Class I genes that have evolved independently, escaping from homogenization by gene conversion. In this review, we revisit the puzzle of the copy number variation in the primate ADH gene family by searching the literature and genome databases and propose a hypothesis that the primate frugivorous behavior has maintained the duplicated genes because of the necessity of digesting ethanol generated by fermentation of fruit sugar.

Keywords

Gene Conversion Whole Genome Sequencing Before Present Whole Genome Sequencing Data Mammalian Radiation 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Abbreviations

ADH

Alcohol dehydrogenase

ALDH

Aldehyde dehydrogenase

BP

Before present

cDNA

Complementary DNA

kb

Kilobase pairs

Km

Inverse of enzyme affinity

mRNA

Messenger RNA

My

Million years

NWM

New World monkey

OWM

Old World monkey

PCR

Polymerase chain reaction

WGS

Whole genome sequencing

Notes

Acknowledgments

We must thank Drs. H. Hirai and H. Imai for kindly giving us the opportunity to write this book chapter.

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Copyright information

© Springer 2012

Authors and Affiliations

  1. 1.Graduate School of Frontier SciencesThe University of TokyoKashiwaJapan
  2. 2.Kitasato University School of MedicineSagamiharaJapan
  3. 3.Department of GeneticsYale University School of MedicineNew HavenUSA

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