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Coat protein phylogeny and systematics of potyviruses

  • E. P. Rybicki
  • D. D. Shukla
Part of the Archives of Virology book series (ARCHIVES SUPPL, volume 5)

Summary

The feasibility of applying molecular phylogenetic methods of analysis to aligned coat-protein sequences and other molecular data derived from coat proteins or genomic sequences of members of the proposed taxonomie family Potyviridae, is discussed. We show that comparative sequence analysis of whole coat-protein sequences may be used reliably to differentiate between sequences of closely related strains, and to show groupings of more distantly related viruses; that coat proteins of putative Potyviridae cluster according to the proposed generic divisions, and, even if some are only very distantly related, the members of the family form a cluster distinct from coat proteins of other filamentous and rod-shaped viruses. Taxonomie revisions based on perceived evolutionary relationships, and the lack of feasibility of erecting higher taxa for these viruses, are discussed.

Keywords

High Performance Liquid Chromatography Mosaic Virus Coat Protein Coat Protein Gene Wheat Streak Mosaic Virus 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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Copyright information

© Springer-Verlag 1992

Authors and Affiliations

  • E. P. Rybicki
    • 1
    • 3
  • D. D. Shukla
    • 2
  1. 1.Department of MicrobiologyUniversity of Cape TownRondeboschSouth Africa
  2. 2.Division of Biomolecular Engineering, Parkville LaboratoryCSIROParkvilleAustralia
  3. 3.Department of MicrobiologyUniversity of Cape TownRondeboschSouth Africa

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