Skip to main content

Lotus Cytogenetics

  • Chapter
  • First Online:
The Lotus japonicus Genome

Part of the book series: Compendium of Plant Genomes ((CPG))

Abstract

Most Lotus species have the basic chromosome number x = 7. The basic number x = 6 is, however, characteristic for the Corniculatus group and the other species from the section Lotus. Polyploidy, especially tetraploidy (2n = 4x), is recurrent in the genus with many species showing diploid and tetraploid accessions and others known as tetraploids only, such as L. corniculatus, the major forage crop. Genomes are relatively small, which, together with other interesting features, led to the choice of L. japonicus as a model legume species. Since then, advances in molecular cytogenetics, with the mapping of repetitive and single-copy sequences, enabled the integration of chromosomes to genetic maps and genome sequence information. Comparative cytogenetic maps were established for species from the section Lotus, mostly from the Corniculatus groups, and have demonstrated the importance of inversions and translocations, in addition to descending dysploidy and polyploidy, to the karyotype evolution of the genus.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  • Allan GJ, Porter JM (2000) Tribal delimitation and phylogenetic relationships of Loteae and Coronilleae (Faboideae: Fabaceae) with special reference to Lotus: evidence from nuclear ribosomal ITS sequences. Am J Bot 87:1871–1881

    Article  PubMed  CAS  Google Scholar 

  • Allan GJ, Zimmer EA, Wagner WL, Sokoloff DD (2003) Molecular phylogenetic analyses of the tribe Lotae (Leguminosae), implications for classification and biogeography. In: Klitgaard BB, Bruneau A (eds) Advances in Legume Systematics, parte 10. High Level Systematics, Royal Botanic Gardens, Kew, pp 371–393

    Google Scholar 

  • Arrambari AM (2000a) A cladistic analysis of the New World species of Lotus L. (Fabaceae, Lotae). Cladistics 16:283–297

    Article  Google Scholar 

  • Arrambari AM (2000b) A cladistic analysis of the Old World species of Lotus L. (Fabaceae: Lotae). Can J Bot 78:351–360

    Google Scholar 

  • Arrambari AM, Stenglein AS, Colares MN, Novoa MC (2005) Taxonomy of the New World species of Lotus (Leguminosae: Lotae). Aust J Bot 53:797–812

    Article  Google Scholar 

  • Banuelos G, Cardon G, Mackey B et al (1992) Boron and selenium removal in boron-laden soil by birdsfoot trefoil. Lotus Newsletter 23:32–35

    Google Scholar 

  • Barykina RP, Kramina T (2006) A comparative morphological and anatomical study of the model legume Lotus japonicus and related species. Wulfenia 13:33–56

    Google Scholar 

  • Bennett MD, Leitch IJ (2012) Plant DNA C-values database (release 6.0, December 2012). http://data.kew.org/cvalues/. Accessed 29 June 2013

  • Cheng RI-J, Grant W (1973) Species relationships in the Lotus corniculatus group as determined by karyotype and cytophotometric analyses. Genome 15:101–115

    CAS  Google Scholar 

  • Degtjareva GV, Kramina TE, Sokoloff DD et al (2006) Phylogeny of the genus Lotus (Leguminosae, Loteae): evidence from nrITS sequences and morphology. Can J Bot 84:813–830

    Article  Google Scholar 

  • Degtjareva GV, Kramina TE, Sokoloff DD et al (2008) New data on nrITS phylogeny of Lotus (Leguminosae, Lotae). Wulfenia 15:35–49

    Google Scholar 

  • Díaz P, Borsani O, Monza J (2005) Lotus-related species and their agronomic importance. In: Márquez (ed) Lotus japonicus Handbook, Springer, Berlin, pp 25–37

    Google Scholar 

  • Falistocco E, Piccirilli M (1989) The basic karyotype of Lotus tenuis C-banding and Feulgen studies. Ann Bot 63:401–404

    Google Scholar 

  • Ferreira J, Mendes S, Dall’Agnol M et al (2012) Comparative analyses in Lotus: the cytogenetic map of Lotus uliginosus Schkuhr. Cytogenet Genome Res 137:42–49. doi:10.1159/000339617

    Article  PubMed  CAS  Google Scholar 

  • Freed HJ, Grant WF (1976) Polytene chromosomes in the suspensor cells of Lotus (Fabaceae). Caryologia 29:387–390

    Article  Google Scholar 

  • Gauthier P, Lumaret R, Bedecarrats A (1997) Chloroplast-DNA variation in the genus Lotus (Fabaceae) and further evidence regarding the maternal parentage of Lotus corniculatus L. Theor Appl Genet 95:629–636

    Article  CAS  Google Scholar 

  • Gonnet S, Díaz P (2000) Glutamine synthetase and glutamate synthase activities in relation to nitrogen fixation in Lotus Spp. R Bras Fisiol Veg 12:195–202

    CAS  Google Scholar 

  • Grant WF (1965) A chromosome atlas and interspecific hybridization index for the genus Lotus (Leguminosae). Can J Genet Cytol 7:457–471

    Google Scholar 

  • Grant WF (1995) A chromosome atlas and interspecific-intergenic index for Lotus and Tetragonolobus (Fabaceae). Can J Bot 73:1787–1809

    Article  Google Scholar 

  • Grant WF, Small E (1996) The origin of the Lotus corniculatus (Fabaceae) complex: a synthesis of diverse evidence. Can J Bot 74:975–989

    Article  Google Scholar 

  • Handberg K, Stougaard J (1992) Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics. Plant J 2:487–496

    Article  Google Scholar 

  • Hayashi M, Miyahara A, Sato S et al (2001) Construction of a genetic linkage map of the model legume Lotus japonicus using an intraspecific F2 population. DNA Res 8:301–310

    Article  PubMed  CAS  Google Scholar 

  • IPCN (2013) Index to plant chromosome numbers (1979–2013) In: Goldblatt P, Johnson DE (eds) Missouri botanical garden, St. Louis. http://www.tropicos.org/Name/13010001. Accessed 29 Jun 2013

  • Ito M, Miyamoto J, Mori Y et al (2000) Genome and chromosome dimensions in Lotus japonicus. J Plant Res 113:435–442

    Article  Google Scholar 

  • Jiang J, Gill BS (2006) Current status and the future of fluorescence in situ hybridization (FISH) in plant genome research. Genome 49:1057–1068

    Article  PubMed  CAS  Google Scholar 

  • Kato A, Vega JM, Han F et al (2005) Advances in plant chromosome identification and cytogenetic techniques. Curr Opin Plan Biol 8:148–154

    Article  CAS  Google Scholar 

  • Kawaguchi M, Pedrosa-Harand A, Yano K et al (2005) Lotus burttii takes a position of the third corner in the Lotus molecular genetics triangle. DNA Res 12:69–77

    Article  PubMed  CAS  Google Scholar 

  • Kramina T (2006) A contribution to the taxonomic revision of the Lotus angustissimus-complex (Leguminosae, Lotae). Wulfenia 13:57–92

    Google Scholar 

  • Kramina T, Sokoloff D (2004) A taxonomic study of Lotus australis complex (Leguminosae), with special emphasis on plants from Pacific Ocean islands. Adansonia 26:171–197

    Google Scholar 

  • Ohmido N, Sato S, Tabata S, Fukui K (2007) Chromosome maps of legumes. Chromosome Res 15:97–103

    Article  PubMed  CAS  Google Scholar 

  • Ohmido N, Ishimaru A, Kato S et al (2010) Integration of cytogenetic and genetic linkage maps of Lotus japonicus, a model plant for legumes. Chromosome Res 18:287–299

    Article  PubMed  CAS  Google Scholar 

  • Pedrosa A, Sandal N, Stougaard J et al (2002) Chromosomal map of the model legume Lotus japonicus. Genetics 161:1661–1672

    PubMed  CAS  PubMed Central  Google Scholar 

  • Pupilli F, Arcioni A, Damiani F, Pezzoti M (1990) Plant regeneration from callus and protoplast cultures of Lotus pedunculatus Car. Plant Cell Tiss Org 23:193–199

    CAS  Google Scholar 

  • Ross MD, Jones WT (1985) The origin of Lotus corniculatus. Theor Appl Genet 71:284–288

    PubMed  CAS  Google Scholar 

  • Sandal N, Krusell L, Radutoiu S et al (2002) An AFLP based genetic linkage map of the model legume Lotus japonicus developed from an interspecific F2 mapping population. Genetics 161:1673–1683

    PubMed  CAS  PubMed Central  Google Scholar 

  • Sato S, Tabata S (2006) Lotus japonicus as a platform for legume research. Curr Opin Plant Biol 9:128–132

    Article  PubMed  CAS  Google Scholar 

  • Sato S, Nakamura Y, Kaneko T et al (2008) Genome structure of the legume, Lotus japonicus. DNA Res 15(4):227–239. doi:10.1093/dnares/dsn008

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Scheffer-Basso SM, Vendrúscolo MC, Cecchetti D (2005) Desempenho de leguminosas nativas (Adesmia) e exóticas (Lotus, Trifolium), em função do estádio fenológico no primeiro corte. R Bras Zootec 34:1871–1880

    Article  Google Scholar 

  • Shankland NE, Grant WF (1976) Localization of Giemsa bands in Lotus pedunculatus chromosomes. Can J Gen Cytol 18:239–244

    Google Scholar 

  • Sokoloff DD, Degtjareva GV, Endress PK et al (2007) Inflorescence and early flower development in Lotae (Leguminosae) in a phylogenetic and taxonomic context. Int J P Sci 168:801–833

    Article  Google Scholar 

  • Sz.-Borsos O (1973) Cytophotometric studies on the DNA contents of diploid Lotus species. Acta Bot Acad Sci Hungar 18:49–58

    Google Scholar 

  • The Plant List (2010) Version 1. http://www.theplantlist.org/. Accessed 29 June 2013

Download references

Acknowledgments

We thank Federico Condón (Instituto Nacional de Investigación Agropecuária – INIA, Uruguay), Miguel Dall’Agnol (Universidade Federal do Rio Grande do Sul, Brazil), Niels Sandal (Aarhus University, Denmark) and Shusei Sato (Kazusa DNA Research Institute, Japan) for seeds and probes and Sandra Mendes (Universidade Federal de Pernambuco, Brazil) for drawing the original Fig. 2.3. Andrea Pedrosa-Harand thanks the Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq), Brazil, for financial support.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Andrea Pedrosa-Harand .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer-Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Ferreira, J., Pedrosa-Harand, A. (2014). Lotus Cytogenetics. In: Tabata, S., Stougaard, J. (eds) The Lotus japonicus Genome. Compendium of Plant Genomes. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-44270-8_2

Download citation

Publish with us

Policies and ethics