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Scaling Up from Molecular to Ecological Processes

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Molecular Ecotoxicology of Plants

Part of the book series: Ecological Studies ((ECOLSTUD,volume 170))

Abstract

Previous chapters in this book have described a number of case studies whose contributions to the concept outlined in Chapter 1 are summarized in Table 8.1. Environmental stress is shown to be countered by numerous preformed or induced genetic and biochemical responses. These may be used operationally as biomarkers to characterize partial aspects of plant fitness. A note of caution is obligatory — so far, this use of molecular biomarkers has only been documented in a limited number of laboratory studies. Development of biomarkers for field use is clearly a task for the future, and current problems of plant and site variability have to be overcome. In addition, functional genomic and biochemical studies have led to a multidimensional view of plant signalling and stress-response networks that has been depicted in the form of a Venn diagram in Chapter 1 (Fig. 1.5). On this basis, it is predicted that the elucidation of signalling and stress response networks in a systematic way will be a major focus of future research.

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References

  • Agrios GN (1997) Plant pathology, 4th edn. Academic Press, San Diego

    Google Scholar 

  • Baerson SR, Rodriguez DJ, Tran M, Feng Y, Biest NA, Dill GM (2002) Glyphosate-resistant goosegrass. Identification of a mutation in the target enzyme 5-enolpyruvylshikimate-3-phosphate synthase. Plant Physiol 129:1265–1275

    Article  PubMed  CAS  Google Scholar 

  • Baldocchi DD (1993) Scaling water vapor and carbon dioxide exchange from leaves to a canopy: rules and tools. In: Ehleringer JR, Field CB (eds) Scaling physiological processes, leaf to globe. Academic Press, San Diego, pp 77–114

    Chapter  Google Scholar 

  • Barker JR, Tingey DT (eds) (1992) Air pollution effects on biodiversity. Van Nostrand Reinhold, New York

    Google Scholar 

  • Bazzaz FA (1997) Allocation of resources in plants: state of the science and critical questions. In: Bazzaz FA, Grace J (eds) Plant resource allocation. Academic Press, San Diego, pp 1–38

    Chapter  Google Scholar 

  • Bazzaz FA, Grace J (eds) Plant resource allocation. Academic Press, San Diego, pp 265–277

    Google Scholar 

  • Bol JF, Linthorst HJM (1990) Plant pathogenesis-related proteins induced by virus infection. Annu Rev Phytopathol 28:113–138

    Article  CAS  Google Scholar 

  • Brown JKM (2002) Yield penalties of disease resistance in crops. Curr Opin Plant Biol 5:339–344

    Article  PubMed  CAS  Google Scholar 

  • Brown JKM, Hovmoller MS (2002) Aerial dispersal of pathogens on the global and continental scales and ist impact on plant disease. Science 297:537–541

    Article  PubMed  CAS  Google Scholar 

  • Büttner D, Bonas U (2002) Getting across-bacterial type III effector proteins on their way to the plant cell. EMBO J 21:5313–5322

    Article  PubMed  Google Scholar 

  • Burdon JJ, Leather SR (eds) (1990) Pests, pathogens and plant communities. Blackwell, Oxford

    Google Scholar 

  • Cao H, Baldini RL, Rahme LG (2001) Common mechanisms for pathogens of plants and animals. Annu Rev Phytopathol 39:259–284

    Article  PubMed  CAS  Google Scholar 

  • Driscoll CT, Lawrence GB, Bulger AJ, Butler TJ, Cronan CS, Eagar C, Lambert KF, Likens GE, Stoddard JL, Weathers KC (2001) Acidic deposition in the Northeastern United States: sources and inputs, ecosystem effects and management strategies. BioScience 51:180–198

    Article  Google Scholar 

  • Eagar C, Adams MB (eds) (1992) Ecology and decline of Red Spruce in the eastern United States. Ecological studies 96. Springer, Berlin Heidelberg New York

    Google Scholar 

  • Ehleringer JR, Field CB (1993) Scaling physiological processes — leaf to globe. Academic Press, San Diego, 387 pp

    Google Scholar 

  • Ehleringer JR, Hall AE, Farquhar GD (1993) Stable isotopes and plant carbon-water relations. Academic Press, San Diego, 555 pp

    Google Scholar 

  • Forschungsbeirat Waldschäden/Luftverunreinigungen (1989) Dritter Bericht. Kernforschungszentrum Karlsruhe GmbH, Karlsruhe

    Google Scholar 

  • Gómez-Gómez L, Boller T (2002) Flagellin perception: a paradigm for innate immunity. Trends Plant Sci 7: 251–256

    Article  PubMed  Google Scholar 

  • Grace J, van Gardingen PR, Luan J (1997) Tackling large-scale problems by scaling-up. In: van Gardingen PR, Foody GM, Curran PJ (eds) Scaling-up from cell to landscape. Cambridge University Press, Cambridge, pp 7–16

    Google Scholar 

  • Grams TEE, Kozovits AR, Reiter IM, Winkler JB, Sommerkorn M, Blaschke H, Häberle KH, Matyssek R (2002) Quantifying competitiveness in woody plants. Plant Biol 4:153–158

    Article  Google Scholar 

  • Grime JP, Hodgson JG, Hunt R (1988) Comparative plant ecology. A functional approach to common British species. Unwin Hyman, London

    Google Scholar 

  • Heil M, Baldwin JT (2002) Fitness costs of induced resistance: emerging experimental support for a slippery concept. Trends Plant Sci 7:61–67

    Article  PubMed  CAS  Google Scholar 

  • Heliövaara K, Väisänen R (1993) Insects and pollution. CRC Press, Boca Raton

    Google Scholar 

  • Herms DA, Mattson WJ (1992) The dilemma of plants: to grow or defend. Q Rev Biol 67:283B335

    Google Scholar 

  • Huggett, RJ, Kimerle RA, Mehrle PM Jr, Bergman HL (eds) (1992) Biomarkers. Biochemical, physiological, and histological markers of anthropogenic stress. Lewis, Boca Raton

    Google Scholar 

  • Hulbert SH, Webb CA, Smith SM, Sun Q (2001) Resistance gene complexes: evolution and utilization. Annu Rev Phytopathol 39:285–312

    Article  PubMed  CAS  Google Scholar 

  • Janeway CA Jr, Medzhitov R (2002) Innate immune recognition. Annu Rev Immunol 20:197–216

    Article  PubMed  CAS  Google Scholar 

  • Jarvis PG (1993) Prospects of bottom-up models. In: Ehleringer JR, Field CB (eds) Scaling physiological processes — leaf to globe. Academic Press, San Diego, pp 117–126

    Google Scholar 

  • Kessler A, Baldwin IT (2002) Plant responses to insect herbivory: the emerging molecular analysis. Annu Rev Plant Biol 53:299–328

    Article  PubMed  CAS  Google Scholar 

  • Kolb TE, Matyssek R (2001) Limitations and perspectives about scaling ozone impact in trees. Limitations and perspectives. Environ Pollut 115: 373–393

    Article  CAS  Google Scholar 

  • Kover PX, Schaal BA (2002) Genetic variation for disease resistance and tolerance among Arabidopsis thaliana accessions. Proc Natl Acad Sci USA 99: 11270–11274

    Article  PubMed  CAS  Google Scholar 

  • Kranz J (1996) Epidemiologie der Pflanzenkrankheiten. Verlag E Ulmer, Stuttgart

    Google Scholar 

  • Kruijt B, Ongeri S, Jarvis PG (1997) Scaling of PAR absorption, photosynthesis, and transpiration from leaves to canopy. In: van Gardingen PR, Foody GM, Curran PJ (eds) Scaling-up from cell to landscape. Cambridge University Press, Cambridge, pp 79–104

    Google Scholar 

  • Laurence JA, Amundson RG, Friend AL, Pell EJ, Temple PJ (1994) Allocation of carbon in plants under stress: an analysis of the ROPIS experiments. J Environ Qual 23:412–417

    Article  Google Scholar 

  • LeBaron HM, Gressel J (eds) (1982) Herbicide resistance in plants. Wiley, New York

    Google Scholar 

  • Levin SA (1993) Concepts of scale at the local level. In: Ehleringer JR, Field CB (eds) Scaling physiological processes — leaf to globe. Academic Press, San Diego, pp 7–20

    Chapter  Google Scholar 

  • Maleck K, Levine A, Eulgem T, Morgan A, Schmid J, Lawton KA, Dangl JL, Dietrich RA (2000) The transcriptome of Arabidopsis thaliana during systemic acquired resistance. Nat Genet 26:403–410

    Article  PubMed  CAS  Google Scholar 

  • Manion PD, Lachance D (eds) (1992) Forest decline concepts. APS Press, St Paul, MN

    Google Scholar 

  • Manning WJ, von Tiedemann A (1995) Climate change: potential effects of increased atmospheric carbon dioxide (CO2), ozone (O3), and ultraviolet-B (UV-B) radiation on plant diseases. Environ Pollut 88:219–245

    Article  PubMed  CAS  Google Scholar 

  • Matyssek R (2001a) How sensitive is birch to ozone ? Responses in structure and function. J For Sci 47:8–20

    Google Scholar 

  • Matyssek R (2001b) Trends in forest tree physiological research: biotic and abiotic interactions. In: Huttunen S, Heikkilä H, Bucher J-B, Sundberg B, Jarvis PG, Matyssek R (eds) Trends in European forest tree physiological research. Kluwer, Dordrecht, pp 241–246

    Chapter  Google Scholar 

  • Matyssek R, Innes JL (1999) Ozone — a risk factor for trees and forests in Europe? Water Air Soil Pollut 116:199–226

    Article  CAS  Google Scholar 

  • Matyssek R, Sandermann H (2003) Impact of ozone on trees — an ecophysiological perspective. Progress in botany. Springer, Berlin Heidelberg New York, pp 349–404

    Google Scholar 

  • Matyssek R, Reich PB, Oren R, Winner WE (1995) Response mechanisms of conifers to air pollutants. In: Smith WK, Hinckley TH (eds) Physiological ecology of coniferous forests. Physiological ecology series. Academic Press, New York, pp 255–308

    Google Scholar 

  • Matyssek R, Günthardt-Goerg MS, Schmutz P, Saurer M, Landolt W, Bucher JB (1998) Response mechanisms of birch and poplar to air pollutants. J Sustainable For 6:3–22

    Google Scholar 

  • Matyssek R, Schnyder H, Elstner E-F, Munch J-C, Pretzsch H, Sandermann H Jr (2002) Growth and parasite defense in plants; the balance between resource sequestration and retention. Plant Biol 4:133–136

    Article  Google Scholar 

  • Miller PR, McBride JR (eds) (1998) Oxidant air pollution impacts in the montane forests of southern California. Ecological studies 134. Springer, Berlin Heidelberg New York

    Google Scholar 

  • Mitchell-Olds T (2001) Arabidopsis thaliana and its wild relatives: a model system for ecology and evolution. Trends Ecol Evol 16:693–700

    Article  Google Scholar 

  • Mooney HA, Winner WE (1991) Partitioning response of plants to stress. In: Mooney HA, Winner WE, Pell E (eds) Response of plants to multiple stresses. Academic Press, San Diego, pp 129–141

    Chapter  Google Scholar 

  • Müller I, Schmid B, Weiner J (2000) The effect of nutrient availability on biomass allocation patterns in 27 species of herbaceous plants. Perspectives in Plant Ecol Evol Syst 2/3:115–127

    Article  Google Scholar 

  • National Research Council (2000) Genetically modified pest-protected plants. Science and regulation. National Academy Press, Washington, DC

    Google Scholar 

  • National Research Council (2002) Environmental effects of transgenic plants. The scope and adequacy of regulation. National Academy Press, Washington, DC

    Google Scholar 

  • Nunn AJ, Reiter IM, Häberle K-H, Werner H, Langebartels C, Sandermann H, Heerdt C, Fabian P, Matyssek R (2002) “Free-air” ozone canopy fumigation in an old-growth mixed forest: concept and observations in beech. Phyton (Austria) 42:105–119

    CAS  Google Scholar 

  • Olson JS, Watts JA, Allison LJ (1983) Carbon in live vegetation of major world ecosystems. DOE/NBB-0037, Carbon Dioxide Division, US Dept. of Energy, Washington

    Google Scholar 

  • Penmetsa RV, Cook DR (1997) A legume ethylene-insensitive mutant hyperinfected by its rhizobial symbiont. Science 275:527–530

    Article  PubMed  CAS  Google Scholar 

  • Polle A, Matyssek R, Gunthardt-Goerg MS, Maurer S (2000) Defense strategies against ozone in trees: the role of nutrition. In: Agrawal SB, Agrawal M (eds), Environmental pollution and plant responses. Lewis Publishers, New York, Boca Raton, pp 223–245

    Google Scholar 

  • Powles SB, Holtum JAM (eds) (1994) Herbicide resistance in plants. Biology and biochemistry. Lewis Publishers, Boca Raton

    Google Scholar 

  • Reynolds JF, Hilbert DW, Kemp PR (1993) Scaling ecophysiology from the plant to the ecosystem: a conceptual framework. In: Ehleringer JR, Field CB (eds), Scaling physiological processes, leaf to globe. Academic Press, San Diego, pp 127–140

    Chapter  Google Scholar 

  • Ries G, Heller W, Puchta H, Sandermann H Jr, Seidlitz HK, Hohn B (2000) Elevated UV-B radiation reduces genome stability in plants. Nature 406:98–101

    Article  PubMed  CAS  Google Scholar 

  • Sandermann H (1996) Ozone and plant health. Annu Rev Phytopathol 34:347–366

    Article  PubMed  CAS  Google Scholar 

  • Sandermann H (1997) Transgene Pflanzen: ökologische Fragen. Spektrum Wissensch 7:38–41

    Google Scholar 

  • Sandermann H (2000) Ozone/biotic disease interactions: molecular biomarkers as a new experimental tool. Environ Pollut 108:327–332

    Article  PubMed  CAS  Google Scholar 

  • Sandermann H (2003) Flawed science underlies laws on transgenic crops. Nature 424: 613

    Article  PubMed  CAS  Google Scholar 

  • Sandermann H, Wellburn AR, Heath RL (eds) (1997) Forest decline and ozone. Ecological studies 127. Springer, Berlin Heidelberg New York

    Google Scholar 

  • Sandermann H, Ernst D, Heller W, Langebartels C (1998) Ozone: an abiotic elicitor of plant defence reactions. Trends Plant Sci 3:47–50

    Article  Google Scholar 

  • Saxe H, Ellsworth DS, Heath J (1998) Tree and forest functioning in an enriched C02 atmosphere. New Phytol 139:395–436

    Article  Google Scholar 

  • Scheffer RP (1997) The nature of disease in plants. Cambridge University Press, Cambridge

    Google Scholar 

  • Scheideler M, Schlaich NL, Fellenberg K, Beissbarth T, Hauser NC, Vingron M, Slusarenko AJ, Hoheisel JD (2002) Monitoring the switch from housekeeping to pathogen defense metabolism in Arabidopsis thaliana using cDNA arrays. J Biol Chem 277:10555–10561

    Article  PubMed  CAS  Google Scholar 

  • Schenk PM, Kazan K, Wilson I, Anderson JP, Richmond T, Somerville SC, Manners JM (2000) Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proc Natl Acad Sci USA 97: 11655–11660

    Article  PubMed  CAS  Google Scholar 

  • Schlesinger WH (1997) Biogeochemistry — an analysis of global change. Academic Press, San Diego, 588 pp

    Google Scholar 

  • Schröder P, Huber B, Olazábal U, Kämmerer A, Munch JC (2002) Land use and sustain-ability: FAM research network on agroecosystems. Geoderma 105:155–166

    Article  Google Scholar 

  • Schulte PA, Perera FP (eds) (1993) Molecular epidemiology. Principles and practices. Academic Press, New York

    Google Scholar 

  • Schulze ED (1994) Flux control in biological systems. Academic Press, San Diego, 494 pp

    Google Scholar 

  • Schulze ED, Lange OL, Oren R (1989) Ecological studies 77. Forest decline in air pollution. Springer, Berlin Heidelberg New York

    Book  Google Scholar 

  • Smith TM, Shugart HH, Woodward FI (eds) (1978) Plant functional types. Cambridge University Press, Cambridge

    Google Scholar 

  • Srivastava S, Lippman SM, Hong WK, Mulshine JL (eds) (1994) Early detection of cancer. Molecular markers. Futura Publishing Company Inc, Armonk, New York

    Google Scholar 

  • Sticher L, Mauch-Mani B, Métraux JP (1997) Systemic acquired resistance. Annu Rev Phytopathol 35:235–270

    Article  PubMed  CAS  Google Scholar 

  • Stitt M, Schulze E-D (1994) Plant growth, storage and resource allocation: from flux control in metabolic chain to the whole-plant level. In: Schulze ED (ed) Flux control in biological systems: from enzymes to populations and ecosystems. Academic Press, San Diego, pp 57–118

    Google Scholar 

  • Tiedje JM, Colwell RK, Grossman YL, Hodson RE, Lenski RE, Mack RN, Regal PJ (1989) The planned introduction of genetically engineered organisms. Ecological considerations and recommendations. Ecology 70:298–315

    Article  Google Scholar 

  • Ustin SL, Smith MO, Adams JB (1993) Remote sensing of ecological processes: a strategy for developing and testing ecological models using spectral mixture analysis. In: Ehleringer JR, Field CB (eds) Scaling physiological processes — leaf to globe. Academic Press, San Diego, pp 341–358

    Google Scholar 

  • van Gardingen PR, Foody GM, Curran PJ (eds) (1997a) Scaling-up from cell to landscape. Cambridge University Press, Cambridge, 386 pp

    Google Scholar 

  • van Gardingen PR, Russell G, Foody GM, Curran PJ (1997b) Science of scaling: a perspective on future challenges. In: van Gardingen PR, Foody GM, Curran PJ (eds) Scaling-up from cell to landscape. Cambridge University Press, Cambridge, pp 371–378

    Google Scholar 

  • Weltzien HC (1978) Geophytopathology. In: Horsfall JG, Cowling EB (eds) Plant disease, vol II. Academic Press, New York, pp 339–360

    Google Scholar 

  • Werner H, Fabian P (2002) Free-air fumigation of mature trees. Environ Sci Pollut Res 9:117–121

    Article  Google Scholar 

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Sandermann, H., Matyssek, R. (2004). Scaling Up from Molecular to Ecological Processes. In: Sandermann, H. (eds) Molecular Ecotoxicology of Plants. Ecological Studies, vol 170. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-08818-0_8

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  • DOI: https://doi.org/10.1007/978-3-662-08818-0_8

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