Abstract
Chickpea (Cicer arietinum L.) is a grain legume of world importance (average annual production approximately 8,500,0001) ranking third after pea and dry bean on the world market (Duke 1981; FAOSTAT 2000). Major production areas are the Indian subcontinent, West Asia and North Africa (WANA), European countries surrounding the Mediterranean basin, and Latin America. In these regions, chickpea belongs to the traditional diet of the people, and serves as animal fodder as well. In recent years chickpea production in the USA, Australia, and Canada has also increased and provides a growing surplus for export. In all these areas, chickpea is an important component of rain-fed, cereal-based intercropping systems.
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References
Arumuganathan K, Earle ED (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9:208–218
Barz W, Bless W, Gunia W, Höhl B, Mackenbrock U, Meyer D, Tenhaken R, Vogelsang R(1993) Mechanism of resistance to fungal pathogens in cool-season food legumes. In: Singh KB, Saxena MC (eds) Breeding for stress tolerance in cool-season food legumes. Wiley, New York, pp 193–210
Becker J, Vos P, Kuiper M, Salamini F, Heun M (1995) Combined mapping of AFLP and RFLP markers in barley. Mol Gen Genet 249:65–73
Beckmann JS, Soller M (1990) Towards a unified approach to genetic mapping of eucaryotes based on sequenced tagged microsatellite sites. Bio/Technology 8:930–932
Blair MW, McCouch SR (1997) Microsatellite and sequence-tagged site markers diagnostic for the rice bacterial leaf blight resistance gene Xa-5. Theor Appl Genet 95:174–184
Burr B, Burr FA, Thompson KH, Albertsen MC, Stuber CW (1988) Gene mapping with recombinant inbreds in maize. Genetics 118:519–526
Caetano-Anollés G, Bassam BJ, Gresshoff PM (1991) DNA amplification fingerprinting: a strategy for genome analysis. Plant Mol Biol Rep 9:292–305
Chen X, Temnykh S, Xu Y, Cho YG, McCouch SR (1997) Development of a microsatellite framework map providing genome-wide coverage in rice. Theor Appl Genet 95:553–567
Cregan PB, Jarvik T, Bush AL, Shoemaker RC, Lark KG, Kahler AI, Kaya N, VanThoai TT, Lohnes DG, Chung J, Specht J (1999) An integrated genetic linkage map of the soybean genome. Crop Sci 39:211–217
Dixon RA, Lamb CJ (1990) Molecular communication in interactions between plants and microbial infection in plants. Annu Rev Plant Pathol Plant Mol Biol 41:339–367
Duke JA(1981) Handbook of legumes of world economic importance. Plenum Press, New York FAOSTAT (2000) http.//apps.fao.org/
Gupta M, Chyi Y-S, Romero-Severson J, Owen JL (1994) Amplification of DNA markers from evolutionary diverse genomes using single primers of simple sequence repeats. Theor Appl Genet 89:998–1006
Gupta PK, Varshney RK (2000) The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica 113:163–185
Hammond-Kosack KE, Jones JJ (1997) Plant disease resistance genes. Annu Rev Plant Phys Plant Mol Biol 48:575–607
Höhl B, Pfautsch M, Barz W (1990) Histology of disease development in resistant and susceptible cultivars of chickpea (Cicer arietinum L.) inoculated with spores of Ascochyta rabiei. J Phytopathol 129:31–45
Hiittel B, Winter P, Weising K, Choumane W, Weigand F, Kahl G (1999) Sequence-tagged microsatellite site markers for chickpea (Cicer arietinum L.). Genome 42:210–217
Hutcheson SW (1998) Current concepts of active defense in plants. Annu Rev Phytopathol 36:59–90
Jiminéz-Diaz RM, Crino P, Halila MH, Masconi C, Trapero-Casas AT(1993) Screening for resistance to fusarium wilt and ascochyta blight in chickpea. In: Singh KB, Saxena MC (eds) Breeding for stress tolerance in cool-season food legumes. Wiley, New York, pp 77–95
Kaiser WJ (1992) Epidemiology of Ascochyta rabiei. In: Singh KB, Saxena MC (eds) Breeding for stress tolerance in cool-season food legumes. Wiley, New York, pp 117–134
Kaiser WJ (1997) Inter- and intranational spread of Ascochyta pathogens of chickpea, faba bean, and lentil. Can J Plant Pathol 19:25–224
Kazan K, Muehlbauer FJ, Weeden NF, Ladizinsky G (1993) Inheritance and linkage relationships of morphological and isozyme loci in chickpea (Cicer arietinum L.). Theor Appl Genet 86: 417–426
Kiinzel G, Korzun L, Meister A (2000) Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints. Genetics 154:397–412
Lamb CJ, Lawton MA, Drou M, Dixon RA (1989) Signals and transduction mechanism for activation of plant defences against microbial attack. Cell 56:215–224
Lander ES, Green P, Abrahamson J, Barlow A, Daly J, Lincoln SE, Newsburg L (1987) MAP-MAKER: an interactive computer package for constructing primary genetic linkage maps of experimental populations. Genomics 1:174–181
Lev-Yadun S, Gopher A, Abbo S (2000) The cradle of agriculture. Science 288:1602–1603
Mansfield DC, Brown AF, Green DK, Carothers AD, Morris SW, Evans HJ, Wright AF (1994) Automation of genetic linkage analysis using fluorescent microsatellite markers. Genomics 24:225–233
Mayer MS, Tullu A, Simon CJ, Kumar J, Kaiser WJ, Kraft JM, Muehlbauer FJ (1997) Development of a DNA marker for Fusarium wilt resistance in chickpea. Crop Sci 37:1625–1629
Michaels SD, John MC, Amasino RM (1994) Removal of polysaccharides from plant DNA by ethanol precipitation. Bio/Techniques 17:274–276
Michelmore R (1996) Flood warning—resistance genes unleashed. Nat Genet 14:376–378
Michelmore RW, Paran I, Kesseli RV (1991) Identification of markers linked to disease resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions using segregating populations. Proc Natl Acad Sci USA 88:9828–9832
Narvel JM, Chu W-C, Fehr WR, Cregan PB, Shoemaker RC (2000) Development of multiple sets of simple sequence repeat DNA markers covering the soybean genome. Mol Breed 6:175–183
Otte O, Barz W (1996) The elicitor-induced oxidative burst in cultured chickpea cells drives the rapid insolubilization of two cell wall structural proteins. Planta 200:238–246
Paran I, Goldmann I, Tanksley SD, Zamir D(1995) Recombinant inbred lines for genetic mapping in tomato. Theor Appl Genet 90:542–548
Paterson A, Lander E, Hewitt JD, Peterson S, Lincoln SE,Tanksley SD (1988) Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms. Nature 335:721–726
Ratnaparkhe MB, Santra DK, Tullu A, Muehlbauer FJ (1998) Inheritance of inter-simple-sequence polymorphisms and linkage with a fusarium wilt resistance gene in chickpea. Theor Appl Genet 96:348–353
Reddy MV, Kabbabeh S(1985). Pathogenic variability in Ascochyta rabiei (Pass) lab in Syria and Lebanon. Phytopathol Mediterr 24:265–266
Robinson RA (1976) Plant pathosystems. Springer, Berlin Heidelberg New York
Santra DK, Tekeoglu M, Kaiser WJ, Muehlbauer FJ (2000) Identification and mapping of QTLs conferring resistance to Ascochyta blight. Crop Sci 40:12606–12612
Sharma PC, Winter P, Bunger T, Huttel B, Weigand F, Weising K, Kahl G (1995a) Abundance and polymorphism of di-, tri- and tetranucleotide tandem repeats in chickpea (Cicer arietinum L.). Theor Appl Genet 90:90–96
Sharma PC, Huttel B, Winter P, Kahl G, Gardner RC, Weising K (1995b) The potential of microsatellites for hybridization- and PCR-based fingerprinting of chickpea (Cicer arietinum L.) and related species. Electrophoresis 16:1755–1761
Simon CJ, Muehlbauer FJ (1997) Construction of a chickpea linkage map and its comparison with maps of pea and lentil. J Hered 88:115–119
Srivastava SK, Singh SN, Khare MN (1984) Assessment of yield losses in some promising gram cultivars due to fusarium wilt. Indian J Plant Prot 12:125–126
Su X-Z, Wu Y, Sifri C D, Wellems TE (1996) Reduced extension temperatures required for PCR amplification of extremely A+T-rich DNA. Nucleic Acids Res 24:1574–1475
Tanksley SD (1993) Mapping polygenes. Annu Rev Genet 27:205–233
Tanksley SD, McCouch SR (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277:1063–1066
Tanksley SD, Ganal MW, Price JP, de Vincente MC, Bonierbale MW, Broun P, Fulton TM, Giovannoni H, Grandillo S, Martin GB, Messeguer R, Miller JC, Miller L, Patterson AH, Pineda O, Röder M, Wing RA, Wu W, Young ND (1992) High density molecular linkage maps of tomato and potato genomes. Genetics 132:1141–1160
Tekeoglu M, Santra DK, Kaiser WJ, Muehlbauer FJ (2000) Ascochyta blight resistance inheritance in three chickpea recombinant inbred lines. Crop Sci 40:1215–1256
Tullu A(1996) Genetics of fusarium wilt resistance in chickpea. PhD Thesis, Crop and Soil Sciences Department, Washington State University, Pullman, WA, USA
Udupa SM, Baum M (2001) High mutation rates and mutational bias at (TAA)n microsatellite loci in chickpea (Cicer arietinum L.). Mol Gen Genomics 265:1097–1103
Udupa SM, Weigand F, Saxena MC, Kahl G (1998). Genotyping with RAPD and microsatellite markers resolves pathotype diversity in the ascochyta blight pathogen of chickpea. Theor Appl Genet 97:299–307
Vogel JM, Scolnik PA (1997) Direct amplification from microsatellites: detection of simple-sequence repeat-based polymorphism without cloning. In: Caetano-Anollés G, Gresshoff PM (eds) DNA markers: protocols, applications and overviews. Wiley, New York, pp 133–150
Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hoernes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407–4414
Wang G, Mackill DJ, Bonman MJ, McCouch SR, Nelson RJ (1994) RFLP mapping of genes conferring complete and partial resistance to blast in a durable resistant rice cultivar. Genetics 136:1421–1434
Weeden NF, Ambrose M, Swiecicki W (1993) Pisum sativum, pea. In: O’Brian SJ (ed) Genetic maps6th edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp 624–634
Weising K, Nybom H, Wolff K, Meyer W (1995) DNA fingerprinting in plants and fungi. CRC Press, Boca Raton
Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531–6535
Winter P, Kahl G (1995) Molecular marker technologies for crop improvement. World J Microbiol Biotechnol 11:449–460
Winter P, Pfaff T, Udupa SM, Hüttel B, Sharma PC, Sahi S, Arreguin-Espinoza R, Weigand F, Muehlbauer FJ, Kahl G (1999) Characterization and mapping of sequence-tagged microsatellite sites in the chickpea (Cicer arietinum L) genome. Mol Gen Genet 262:90–101
Winter P, Benko-Iseppon A-M, Hüttel B, Ratnaparkhe M, Tullu A, Sonnante G, Pfaff T, Tekeoglu M, Santra D, Sant VJ, Rajesh PN, Kahl G, Muehlbauer FJ (2000) A linkage map of the chickpea (Cicer arietinum L.) genome based on recombinant inbred lines from a C. arietinum x C reticulatum cross: Localization of resistance genes for Fusarium races 4 and 5. Theor Appl Genet 101:1155–1163
Winter P, Staginnus C, Sharma PC, Kahl G(2001a) Organisation and genetic mapping of the chickpea genome. In: Jaiwal PK, Singh RP (eds) Biotechnology for the improvement in legumes. Kluwer, Dordrecht, pp 285–360
Winter P, Hüttel B, Weising K, Kahl G (2001b) Microsatellites and molecular breeding: exploitation of microsatellite variability for the analysis of a monotonous genome. In: Jain SM, Brar DS, Ahloowalia BS(eds) Molecular techniques in crop improvement. Kluwer, Dordrecht
Xu Y, Zhu L, Xiao J, Huang N, McCouch SR (1997) Chromosomal regions associated with segregation distortion of molecular markers in F2 backcross, double haploid, and recombinant inbred populations in rice (Oryza sativa L). Mol Gen Genet 253:535–545
Young ND (2000) The genetic architecture of resistance. Curr Opin Plant Biol 3:285–290
Young WP, Schupp JM, Keim P (1999) DNA methylation and AFLP marker distribution. Theor Appl Genet 99:785–790
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Winter, P., Rakshit, S., Baum, M., Kahl, G. (2003). Mapping the Chickpea (Cicer arietinum L.) Genome: Localization of Fungal Resistance Genes in Interspecific Crosses. In: Nagata, T., Tabata, S. (eds) Brassicas and Legumes From Genome Structure to Breeding. Biotechnology in Agriculture and Forestry, vol 52. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-05036-1_16
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DOI: https://doi.org/10.1007/978-3-662-05036-1_16
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