Abstract
Ninety seven Philippine and 24 banana-infecting strains from other countries were hybridized with probes which harbor the genes for extracellular polysaccharides (E36, 07, Q50), endoglucanase (pHE3), tryptophan biosynthesis (pT161), a random clone (pZ1217) from the gene bank of a Philippine ginger strain and a cloned repetitive element from a Philippine banana strain. The same set was also analyzed by polymerase chain reaction (PCR) using REP, ERIC and BOX primers (rep-PCR). At 65% level of similarity, five and six clusters resulted in the composite restriction fragment length polymorphism (RFLP) and PCR analysis, respectively. Only the cloned repetitive element in the RFLP analysis and REP and BOX primers in PCR analysis detected polymorphism among the Philippine banana isolates. In all cases, more than 96% of the strains belonged to one haplotype and the rest to the other haplotypes. Based on the above analysis, the banana wilt (moko) and the fruit blackening (bugtok) strains from the Philippines were genetically indistinguishable.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Briones Ajr, Raymundo AK, Holloway B (1987) Unpublished data
Cook DE, Sequeira L (1991) Genetic and biochemical characterization of a Pseudomonas solanacearum gene cluster required for extracellular polysaccharide production and for virulence. J Bacteriol 73:1654 – 1662
Maniatis T, Fritsch ER, Sambrook J (1986) Molecular cloning: A Laboratory Manual. Cold Spring Harbor Laboratory. New York. p 545
Roperos NI, Magnaye LV (1991) Status of banana diseases in the Philippines. banana diseases in Asia and the Pacific. In: Proceedings of a regional technical meeting on diseases affecting banana and plantain in Asia and the Pacific, Brisbane, Australia, pp 52 – 66
Roperts DP, Denny TP, Schell MA (1988) Cloning of the egl gene of Pseudomonas solanacearum analysis of its role in phytopathogenicity. J Bacteriol 170:1445 – 1451
Sneath PHA, Sokal RR (1973) Numerical taxonomy. Freeman WH and Company, San Francisco, Calif p 573
Soguilon CE, Magnaye LV, Natural MP (1994) “Bugtok” disease of cooking bananas: etiology and diagnostic symptoms. Philippine Phytopathol 30:26 – 34
Versalovic J, Koeuth T, Lupski JR (1991) Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucl Acids Res 19:6823 – 6831
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1998 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Raymundo, A.K., Aves-ILagan, Y., Denny, T.P. (1998). Analysis of Genetic Variation of a Population of Banana Infecting Strains of Ralstonia solanacearum . In: Prior, P., Allen, C., Elphinstone, J. (eds) Bacterial Wilt Disease. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-662-03592-4_8
Download citation
DOI: https://doi.org/10.1007/978-3-662-03592-4_8
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-08361-7
Online ISBN: 978-3-662-03592-4
eBook Packages: Springer Book Archive