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Inter-Species, Inter-Tissue Domain Adaptation for Mitotic Figure Assessment

Learning New Tricks from Old Dogs

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Bildverarbeitung für die Medizin 2020

Zusammenfassung

For histopathological tumor assessment, the count of mitotic figures per area is an important part of prognostication. Algorithmic approaches - such as for mitotic figure identification - have significantly improved in recent times, potentially allowing for computer-augmented or fully automatic screening systems in the future. This trend is further supported by whole slide scanning microscopes becoming available in many pathology labs and could soon become a standard imaging tool. For an application in broader fields of such algorithms, the availability of mitotic figure data sets of sufficient size for the respective tissue type and species is an important precondition, that is, however, rarely met. While algorithmic performance climbed steadily for e.g. human mammary carcinoma, thanks to several challenges held in the field, for many tumor types, data sets are not available. In this work, we assess domain transfer of mitotic figure recognition using domain adversarial training on four data sets, two from dogs and two from humans. We were able to show that domain adversarial training considerably improves accuracy when applying mitotic _gure classification learned from the canine on the human data sets (up to +12.8% in accuracy) and is thus a helpful method to transfer knowledge from existing data sets to new tissue types and species.

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Literatur

  1. Elston CW, Ellis IO. Pathological prognostic factors in breast cancer. I. The value of histological grade in breast cancer: experience from a large study with long-term follow-up. Histopathology. 1991;19(5):403–410.

    Google Scholar 

  2. Roux, L, Racoceanu, D, Capron, F, et al. MITOS & ATYPIA - Detection of mitosis and evaluation of nuclear atypia score in breast cancer histological images. IPAL, Agency Sci, Technol Res Inst Infocom Res, Singapore, Tech Rep. 2014;.

    Google Scholar 

  3. Li C, Wang X, Liu W, et al. DeepMitosis: Mitosis detection via deep detection, verification and segmentation networks. Med Image Anal. 2018;45:121–133.

    Google Scholar 

  4. Bertram CA, Aubreville M, Marzahl C, et al. A large-scale dataset for mitotic figure assessment on whole slide images of canine cutaneous mast cell tumor. Sci Data. 2019;274:1–9.

    Google Scholar 

  5. Aubreville M, Bertram C, Klopfleisch R, et al. SlideRunner. Procs BVM. 2018; p. 309–314.

    Google Scholar 

  6. Ganin Y, Ustinova E, Ajakan H, et al. Domain-adversarial training of neural networks. J Mach Learn Res. 2016;.

    Google Scholar 

  7. Lafarge MW, Pluim JP, Eppenhof KA, et al. Domain-adversarial neural networks to address the appearance variability of histopathology images. In: Deep Learning in Medical Image Analysis and Multimodal Learning for Clinical Decision Support. Springer; 2017. p. 83–91.

    Google Scholar 

  8. He K, Zhang X, Ren S, et al. Deep residual learning for image recognition. Procs CVPR. 2016; p. 770–778.

    Google Scholar 

  9. Kamnitsas K, Baumgartner C, Ledig C, et al. Unsupervised domain adaptation in brain lesion segmentation with adversarial networks. Int Conf on Inf Proc in Med Imaging. 2017; p. 597–609.

    Google Scholar 

  10. Smith LN, Topin N. Super-convergence: very fast training of neural networks using large learning rates. In: Pham T, editor. Artificial Intelligence and Machine Learning for Multi-Domain Operations Applications. International Society for Optics and Photonics; 2019. p. 1100612.

    Google Scholar 

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Correspondence to Marc Aubreville .

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© 2020 Springer Fachmedien Wiesbaden GmbH, ein Teil von Springer Nature

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Aubreville, M., Bertram, C.A., Jabari, S., Marzahl, C., Klopfleisch, R., Maier, A. (2020). Inter-Species, Inter-Tissue Domain Adaptation for Mitotic Figure Assessment. In: Tolxdorff, T., Deserno, T., Handels, H., Maier, A., Maier-Hein, K., Palm, C. (eds) Bildverarbeitung für die Medizin 2020. Informatik aktuell. Springer Vieweg, Wiesbaden. https://doi.org/10.1007/978-3-658-29267-6_1

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