Abstract
The worldwide interest in artificial neural networks that has emerged during the 1980’es has its origins in the dual nature of neural networks: they belong to the class of non-linear dynamical systems, but can also be used as general modeling devices for such systems. Non-linear dynamical systems have traditionally been extremely difficult to model, theoretically or experimentally.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Bohr, H., Bohr, J., Brunak, S., Cotterill, R.M.J., Lautrup, B., Nørskov, L., Olsen, O.H. & Petersen, S.B. (1988). Protein Structure and Homology by Neural Networks. FEBS Letters 241, 223–228.
Bohr, H., Bohr, J., Brunak, S., Cotterill, R.M.J., Fredholm, H., Lautrup, B., & Petersen, S.B. (1990). A Novel Approach to prediction of the 3-dimensional structures of protein backbones by neural networks. FEBS Letters 261, 43–46.
Brunak, S., Engelbrecht, J. & Knudsen, S. (1990). Cleaning up gene databases. Nature 343, 123.
Brunak, S., Engelbrecht, J. & Knudsen, S. (1990). Neural Network Detects Errors in the Assignment of pre-mRNA Splice Sites. Nucl. Acids Res. 18, 4797–4801.
Brunak, S., Engelbrecht, J. & Knudsen, S. (1990). Prediction of human mRNA donor and acceptor sites from the DNA sequence, Preprint, November 1990.
Chreighton T.E. (1984). Proteins — Structures and Molecular Properties, Freeman, New York.
Green, M. R. (1986). Pre-mRNA Splicing. Ann. Rev. Genet. 20, 671–708.
Holley, L.H. and Karplus, M. (1989). Protein Secondary Structure Prediction With a Neural Network. Proc. Natl. Acad. Sci. 86, 152–156.
Kabsch, W. & Sander, C. (1983). Dictionary of Protein Secondary Structure: Pattern Recognition of Hydrogen-Bonded and Geometrical Features. Biopolymers 22, 2577–2637.
Kneller, D. G, Cohen, F. E. & Langridge, R. (1990). Improvements in Protein Secondary Prediction by An Enhanced Neural Network. J. Mol. Biol. 214, 171–182.
Lapedes, A., Barnes, C., Burks, C., Farber, R. & Sirotkin, K. (1990) “Application of Neural Networks and Other Machine Learning Algorithms to DNA Sequence Analysis.” The Proceedings of the Interface Between Computation Science and Nucleic Acid Sequencing Workshop, Dec. 1988 in Santa Fe, New Mexico. Eds. G.I. Bell and T.G. Marr. Proceedings of the Santa Fe Institute vol. VII, 157–182, Addison-Wesley.
Minsky, M. & Papert, S. (1969, 1988). Perceptrons. MIT Press, Cambridge, Massachusetts.
Qian, N. & Sejnowski, T.J. (1988). Predicting the Secondary Structure of Globular Proteins Using Neural Network Models. J. Mol. Biol. 202, 865–884.
Richardson, J.C. & Richardson, D.C. (1989). Principles and Patterns of Protein Conformation, in: Prediction of Protein Structure and the Principles of Protein Conformation, ed. G.D. Fasman, Plenum, 1–98.
Rosenblatt, F. (1962). Principles of Neurodynamics. Spartan Books. New York.
Rumelhart, D.E., Hinton, G.E. & Williams, R.J. (1986) In Rumelhart, D.E., McClelland, J.L. and the PDP Research Group (eds.), Parallel Distributed Processing: Explorations in the Microstructure of Cognition. MIT Press, Cambridge, Massachusetts, vol. I, 318–362.
Sejnowski, T.J. & Rosenberg, C.R. (1987). Parallel Networks that Learn to Pronounce English Text. Complex Systems 1, 145–168.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1993 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Brunak, S. (1993). Doing Sequence Analysis by Inspecting the Order in which Neural Networks Learn. In: Soumpasis, D.M., Jovin, T.M. (eds) Computation of Biomolecular Structures. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-77798-1_4
Download citation
DOI: https://doi.org/10.1007/978-3-642-77798-1_4
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-77800-1
Online ISBN: 978-3-642-77798-1
eBook Packages: Springer Book Archive