Abstract
The configurational hyperspace for some simple organic molecules has been investigated by potential energy contour tracing. This method, which offers an advantage over normal molecular dynamics by a factor in the hundreds to thousands, is ideally suited for rapidly checking whether the molecule is in a locally bound region of hyperspace. It can thus be used to check whether the molecule is in the vicinity of an energy minimum. In the case of alanine dipeptide, the method has revealed that the global minimum functions like an attractor for the hyperspace trajectory.
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Reference
Cotterill RMJ, Madsen, JU (1990) Potential energy contour tracing: An efficient way of exploring configuration hyperspace. In: Characterising Complex Systems, H. Bohr, ed. World Scientific Singapore, 177–191.
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© 1993 Springer-Verlag Berlin Heidelberg
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Cotterill, R.M.J., Platt, E., Robson, B. (1993). Rapid Conformational Investigations of Organic Molecules. In: Soumpasis, D.M., Jovin, T.M. (eds) Computation of Biomolecular Structures. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-77798-1_12
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DOI: https://doi.org/10.1007/978-3-642-77798-1_12
Publisher Name: Springer, Berlin, Heidelberg
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