Skip to main content

The POL1 and POL3 DNA Synthesis Genes in Fission Yeast Schizosaccharomyces pombe

  • Conference paper

Abstract

We isolated and sequenced the S. pombe genes encoding the catalytic subunits of DNA polymerases a (POL1) and δ (POL3) by sequence homology with S. cerevisiae gene probes. Both genes contain a short intron in the 5’ region of the open reading frame. About 300 bp 5’ to POL1 is located the RPL7b gene which encodes a predicted ribosomal protein and is divergently transcribed. The codon usage of POL1 and POL3 is in agreement with both genes being weakly expressed; on the contrary, RPL7b shows a codon usage characteristic of highly expressed genes. The pol α and pol δ predicted peptides were compared with known sequences of DNA polymerases. Both polypeptides contain the seven conserved amino acid blocks diagnostic of a super-family of DNA polymerases. Moreover, pol a shows additional blocks conserved only in α-type eukaryotic DNA polymerases known to date, and pol δ shows a high overall identity percentage with the homologous S. cerevisiae protein indicating an important structural inter-species conservation. We also raised antibodies against two fusion proteins containing E. coli β-galactosidase and part of either pol α or pol δ. These antibodies inhibit in vitro two distinct DNA polymerase activities present in S. pombe cell extracts.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Allshire RC, Cranston G, Gosden JR, Maule JC, Hastie NE, Fantes PA (1987) A fission yeast chromosome can replicate autonomously in mouse cells. Cell 50:391–403

    Article  PubMed  CAS  Google Scholar 

  • Araki H, Hamatake RK, Johnston LH, Sugino A (1991) DPB2, the gene encoding DNA polymerase II subunit B, is required for chromosome replication in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 88:4601–4605

    Article  PubMed  CAS  Google Scholar 

  • Bambara RA, Jessee CB (1991) Properties of DNA polymerases delta and epsilon, and their roles in eukaryotic DNA replication. Biochim Biophys Acta 1088:11–24

    PubMed  CAS  Google Scholar 

  • Beck CF, Warren RAJ (1988) Divergent promoters, a common form of gene organization. Microbiol Rev 52:318–326

    PubMed  CAS  Google Scholar 

  • Blanco L, Bernad A, Blasco MA, Salas M (1991) A general structure for DNA-dependent DNA polymerases. Gene 100:27–38

    Article  PubMed  CAS  Google Scholar 

  • Boulet A, Simon M, Faye G, Bauer GA, Burgers PMJ (1989) Structure and function of the Saccharomyces cerevisiae CDC2 gene encoding the large subunit of DNA polymerase in. EMBO J 8:1849–1854

    PubMed  CAS  Google Scholar 

  • Brooke RG, Singhai R, Hinkle DC, Dumas LB (1991) Purification and characterization of the 180- and 86-kilodalton subunits of the Saccharomyces cerevisiae DNA primase-DNA polymerase protein complex. J Biol Chem 266:3005–3015

    PubMed  CAS  Google Scholar 

  • Burgers PMJ (1989) Eukaryotic DNA polymerases alpha and delta: conserved properties and interactions, from yeast to mammalian cells. Progr Nucleic Acids Res Mol Biol 37:235–281

    Article  CAS  Google Scholar 

  • Damagnez V, Tillit J, De Recondo A-M, Baldacci G (1991a) The POL1 gene from the fission yeast, Schizosaccharomyces pombe, shows conserved amino acid blocks specific for eukaryotic DNA polymerases alpha. Mol Gen Genet 226:182–189

    Article  PubMed  CAS  Google Scholar 

  • Damagnez V, De Recondo A-M, Baldacci G (1991b) Identification of a gene encoding the predicted ribosomal protein L7b divergently transcribed from POL1 in fission yeast Schizosaccharomyces pombe. Nucleic Acids Res 19:1089–1104

    Article  Google Scholar 

  • Foiani M, Santocanale C, Plevani P, Lucchini G (1989) A single essential gene, PRI2, encodes the large subunit of DNA primase in Saccharomyces cerevisiae. Mol Cell Biol 9:3081–3087

    PubMed  CAS  Google Scholar 

  • Foury F (1989) Cloning and sequencing of the nuclear gene MIP1 encoding the catalytic subunit of the yeast mitochondrial DNA polymerase. J Biol Chem 264:20552–20560

    PubMed  CAS  Google Scholar 

  • Guthrie C, Fink GR (eds) (1991) Guide to yeast genetics and molecular biology. Methods in Enzymology 194. Academic Press Inc. San Diego California

    Google Scholar 

  • Harlow E, Lane D (1988) Antibodies. Cold Spring Harbor Laboratory Press Cold Spring Harbor New York

    Google Scholar 

  • Lowndes NF, Johnson AL, Johnston LH (1991) Coordination of expression of DNA synthesis genes in budding yeast by a cell-cycle regulated trans factor. Nature 350:247–250

    Article  PubMed  CAS  Google Scholar 

  • McLeod M, Stein M, Beach D (1987) The product of of the mei3 + gene, expressed under control of the mating-type locus, induces meiosis and sporulation in fission yeast. EMBO J 6:729–736

    PubMed  CAS  Google Scholar 

  • Mertins P, Gallwitz D (1987) Nuclear pre-mRNA splicing in the fission yeast Schizosaccharomyces pombe strictly requires an intron-contained, conserved sequence element. EMBO J 6:1757–1763

    PubMed  CAS  Google Scholar 

  • Moreno S, Klar A, Nurse P (1991) Molecular genetic analysis of fission yeast Schizosaccharomyces pombe. In: Guide to yeast genetics and molecular biology. Methods in Enzymology 194:795–823. Academic Press Inc. San Diego California

    Chapter  Google Scholar 

  • Morrison A, Araki H, Clark AB, Hamatake RK, Sugino A (1990) A third essential DNA polymerase in S. cerevisiae. Cell 62:1143–1151

    Article  PubMed  CAS  Google Scholar 

  • Morrison A, Christensen RB, Alley J, Beck AK, Bernstine EG, Lemontt JF, Lawrence CW (1989) REV3, a Saccharomyces cerevisiae gene whose function is required for induced mutagenesis, is predicted to encode a nonessential DNA polymerase. J Bacteriol 171: 5659–5667

    PubMed  CAS  Google Scholar 

  • Nasim A, Young P, Johnson BF (eds) (1989) Molecular Biology of the Fission Yeast. Academic Press Inc. San Diego California

    Google Scholar 

  • Pignède G, Bouvier D, De Recondo A-M, Baldacci G (1991) Characterization of the POL3 gene product from S. pombe indicates inter-species conservation of the catalytic subunit of DNA polymerase delta. J Mol Biol in press

    Google Scholar 

  • Pizzagalli A, Valsasnini P, Plevani P, Lucchini G (1988) DNA polymerase I gene of Saccharomyces cerevisiae: Nucleotide sequence, mapping of a temperature-sensitive mutation, and protein homology with other DNA polymerases. Proc Natl Acad Sci USA 85:3772–3776

    Article  PubMed  CAS  Google Scholar 

  • Plevani P, Francesconi S, Lucchini G (1987) The nucleotide sequence of the PRI1 gene related to DNA primase in Saccharomyces cerevisiae. Nucleic Acids Res 15:7975–7989

    Article  PubMed  CAS  Google Scholar 

  • Rizzo MG, Ottavio L, Travali S, Chang C-D, Kaminska B, Baserga R (1990) The promoter of the human Proliferating Cell Nuclear Antigen (PCNA) gene is bidirectional. Exp Cell Res, 188:286–293

    Article  PubMed  CAS  Google Scholar 

  • Russel P (1989) Gene cloning and expression in fission yeast. In Molecular Biology of the Fission Yeast (Nasim A, Young P, Johnson BF eds) 243–271. Academic Press Inc. San Diego California

    Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning. Cold Spring Harbor Laboratory Press Cold Spring Harbor New York

    Google Scholar 

  • Thömmes P, Hübscher U (1990) Eukaryotic DNA replication. Eur J Biochem 194:699–712

    Article  PubMed  Google Scholar 

  • Wahl AF, Geis AM, Spain BH, Wong SW, Korn D, Wang TS-F (1988) Gene expression of human DNA polymerase alpha during cell proliferation and the cell cycle. Mol Cell Biol 8:5016–5025

    PubMed  CAS  Google Scholar 

  • Wang TS-F, Wong SW, Korn D (1989) Human DNA polymerase alpha: predicted functional domains and relationships with viral DNA polymerases. FASEB J 3:14–21.

    PubMed  CAS  Google Scholar 

  • Wong SW, Wahl AF, Yuan P-M, Arai N, Pearson BE, Arai K-I, Korn D, Hunkapiller MW, Wang TSF (1988) Human DNA polymerase alpha gene expression is cell proliferation dependant and its primary structure is similar to both prokaryotic and eukaryotic replicative DNA polymerases. EMBO J 7:37–47

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1992 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Baldacci, G., Bouvier, D., Damagnez, V., Pignède, G., de Recondo, AM. (1992). The POL1 and POL3 DNA Synthesis Genes in Fission Yeast Schizosaccharomyces pombe . In: Hughes, P., Fanning, E., Kohiyama, M. (eds) DNA Replication: The Regulatory Mechanisms. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-76988-7_24

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-76988-7_24

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-76990-0

  • Online ISBN: 978-3-642-76988-7

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics