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Substruktursuche: Ein Leistungsvergleich von DARC, HTSS, MACCS und S4 durch das Beilstein Institut

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Software-Entwicklung in der Chemie 3

Zusammenfassung

Die Inhouse Substruktursuchsysteme DARC [1,2], MACCS [3,4], HTSS[5] und S4 [6] wurden auf Treffergenauigkeit und Geschwindigkeit getestet. Die Ergebnisse zeigen, daß die Genauigkeit aller Systeme sehr gut ist. S4 ist für die verwendeten Suchanfragen sehr viel schneller als die anderen Systeme.

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Referenzen

  1. Available from Télésystèmes.

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  2. Attias, R., J. Chem. Inf. Comput. Sci. 23, 102–8 (1983).

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  3. Available from MDL.

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  4. Adamson, G. W., Bird, J. M., Palmer and Warr, W. A., Journal of Molecular Graphics 4, 165 (1986).

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  5. Nagy, M. Z., Kozics, S., Veszpremi, T., and Bruck, P., pp 127–130 in “Chemical Structures” W. A. Warr (Ed.), Springer-Verlag (1988).

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  6. Developed by Beilstein/Softron.

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  7. Willett, P., Journal of Chemometrics 1, 139–155 (1987).

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  8. See further articles in (5).

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  9. Not measured under the same machine loading conditions.

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  10. The hit list is that for S4 which in this implementation does not have any tautomer processing. Due to the different system conventions and input possibilities the hit lists for the other systems will differ slightly for certain queries.

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  11. In Set 2 the “star” implies maximal free sites.

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  12. To be published.

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  13. Since the system limits were exceeded for queries C3 and H8B with DARC, the average time has been calculated for the remaining queries for all systems.

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  14. In DARC because of the use of an intermediate bit screen, not all the candidates necessarily undergo the atom-by-atom search.

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© 1989 Springer-Verlag Berlin Heidelberg

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Hicks, M.G. (1989). Substruktursuche: Ein Leistungsvergleich von DARC, HTSS, MACCS und S4 durch das Beilstein Institut. In: Gauglitz, G. (eds) Software-Entwicklung in der Chemie 3. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-74373-3_2

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  • DOI: https://doi.org/10.1007/978-3-642-74373-3_2

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-50673-7

  • Online ISBN: 978-3-642-74373-3

  • eBook Packages: Springer Book Archive

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