Abstract
Results of cluster analysis usually depend to a large extent on the choice of a clustering method. Clustering with constraint (time or space) is a way of restricting the set of possible solutions to those that make sense in terms of these constraints. Time and space contiguity are so important in ecological theory that their imposition as an a priori model during clustering is reasonable. This paper reviews various methods that have been proposed for clustering with constraint, first in one dimension (space or time), then in two or more dimensions (space). It is shown, using autocorrelated simulated data series, that if patches do exist, constrained clustering always recovers a larger fraction of the information than the unconstrained equivalent. The comparison of autocorrelated to uncorrected data series also shows that one can tell, from the results of agglomerative constrained clustering, whether the patches delineated by constrained clustering are real. Finally, it is shown how constrained clustering can be extended to domains other than space or time.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Bell, M. A., and P. Legendre. 1987. Multicharacter chronological clustering in a sequence of fossil sticklebacks. Syst. Zool. 36: (in press).
Bray, R. J., and J. T. Curtis. 1957. An ordination of the upland forest communities of southern Wisconsin. Ecol. Monogr. 27: 325–349.
Cliff, A. D., and J. K. Ord. 1981. Spatial processes: models and applications. Pion Limited, London. 266 p.
De Soete, G., J.D. Carroll, and W.S. DeSarbo. 1987. Least squares algorithms for constructing constrained ultrametric and additive tree representations of symmetric proximity data. J. Class, (in press).
Estabrook, G. F., and D. J. Rogers. 1966. A general method of taxonomic description for a computed similarity measure. Bioscience 16: 789–793.
Fisher, W. D. 1958. On grouping for maximum homogeneity. J. Amer. Stat. Ass. 53: 789–798.
Gabriel, K. R., and R. R. Sokal. 1969. A new statistical approach to geographic variation analysis. Syst. Zool. 18: 259–278.
Galzin, R., and P. Legendre. 1987. The fish communities of a coral reef transect. Pac. Sci. (in press).
Gordon, A. D. 1973. Classification in the presence of constraints. Biometrics 29: 821–827.
Gordon, A. D., and H. J. B. Birks. 1974. Numerical methods in Quaternary palaeoecology. II. Comparison of pollen diagrams. New Phytol. 73: 221–249.
Green, P. J., and R. Sibson. 1978. Computing Dirichlet tessellations in the plane. Computer J. 21: 168–173.
Green, P. J., and R. Sibson. 1978. Computing Dirichlet tessellations in the plane. Computer J. 21: 168–173.
Hawkins, D. M., and D. F. Merriam. 1973. Optimal zonation of digitized sequential data. J. Int. Assoc. Math. Geology 5: 389–395.
Hawkins, D. M., and D. F. Merriam. 1974. Zonation of multivariate sequences of digitized geologic data. J. Int. Assoc. Math. Geology 6: 263–269.
Howe, S. E. 1979. Estimating regions and clustering spatial data: analysis and implementation of methods using Voronoi diagrams. Ph. D. Thesis, Department of Mathematics, Brown University.
Ibanez, F. 1984. Sur la segmentation des sdries chronologiques planctoniques multivariables. Oceanol. Acta 7: 481–491.
Lance, G. N., and W. T. Williams. 1967. A general theory of classificatory sorting strategies. I. Hierarchical systems. Computer J. 9: 373–380.
Lebart, L. 1978. Programme d’agregation avec contraintes (C. A. H. contiguit6). Cah. Anal. Donn6es 3: 275–287.
Lefkovitch, L. P. 1987. Species associations and conditional clustering: clustering with or without pairwise resemblances. This volume.
Legendre, P., B. Baleux, and M. Troussellier. 1984. Dynamics of pollution–indicator and heterotrophic bacteria in sewage treatment lagoons. Appl. Environ. Microbiol. 48: 586–593.
Legendre, P., S. Dallot, and L. Legendre. 1985. Succession of species within a community: chronological clustering, with applications to marine and freshwater zooplankton. Am. Nat. 125: 257–288.
Legendre, P., and V. Legendre. 1984. Postglacial dispersal of freshwater fishes in the Quebec peninsula. Can. J. Fish. Aquat. Sci. 41: 1781–1802.
Mantel, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Res. 27: 209–220.
Matula, D. W., and R. R. Sokal. 1980. Properties of Gabriel graphs relevant to geographic variation research and the clustering of points in the plane. Geogr. Anal. 12: 205–222.
Milligan, G. W. 1983. Characteristics of four external criterion measures, p. 167–173. In J. Felsenstein [ed.] Numerical taxonomy. NATO Advanced Study Institute Series G (Ecological Sciences), No. 1. Springer–Verlag, Berlin.
Monestiez, P. 1978. M6thodes de classification automatique sous contraintes spatiales, p. 367–379. In J. M. Legay and R. Tomassone [ed.] Biom6trie et 6cologie. Soci6t6 frangaise de Biom6trie, Paris.
Motyka, J. 1947. O zadaniach i metodach badan geobotanicznych. Sur les buts et les m6thodes des recherches gobotaniques. Ann. Univ. Mariae Curie–Sklodowska Sect C, Suppl. I. viii + 168 p.
Okabe, A. 1981. Statistical analysis of the pattern similarity between 2 sets of regional clusters. Environment and Planning A 13: 547–562.
Openshaw, S. 1974. A regionalisation program for large data sets. Computer Appl. 3–4: 136–160.
Rajski, C. 1961. Entropy and metric space, p. 44–45. In C. Cherry [ed.] Information theory. Butterworths, London.
Ray, D. M., and B. J. L. Beny. 1966. Multivariate socioeconomic regionalization: a pilot study in central Canada, p. 75–130. In S. Ostry and T. Rymes [ed.] Papers on regional statistical studies. Univ. of Toronto Press, Toronto.
Sokal, R. R., N. L. Oden, and J. S. F. Barker. 1987. Spatial structure in Drosophila buzzatii populations: simple and directional spatial autocorrelation. Am. Nat. 129: 122–142.
Sokal, R. R., and J. D. Thomson. 1987. Applications of spatial autocorrelation in ecology. This volume.
Ward, J. H. Jr. 1963. Hierarchical grouping to optimize an objective function. J. Amer. Stat. Assoc. 58: 236–244.
Wartenberg, D. E. Regional analysis: describing multivariate data distributions using geographic information. Manuscript (cited with permission of the author).
Webster, R. 1973. Automatic soil–boundary location from transect data. J. Int. Assoc. Math. Geology 5: 27–37.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1987 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Legendre, P. (1987). Constrained Clustering. In: Legendre, P., Legendre, L. (eds) Develoments in Numerical Ecology. NATO ASI Series, vol 14. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-70880-0_7
Download citation
DOI: https://doi.org/10.1007/978-3-642-70880-0_7
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-70882-4
Online ISBN: 978-3-642-70880-0
eBook Packages: Springer Book Archive