Abstract
Chromatin is the virtual genetic material of eukaryotes which essentially exhibit two molecular components and functional aspects: the DNA encoding the genetic information, and the chromosomal proteins controlling DNA packaging and thus gene activity. Although massive progress has been achieved in the elucidation of chromatin composition and structure during the last years, the ultimate solution to the twin problems of gene control and DNA packaging is likely to be complex. The complications we already find in prokaryotes should warn us against over-simple answers (Crick 1979). This review will deal with evidence obtained by biochemistry, biophysics, and electron microscopy on the structure of chromatin at several levels of order, the functional significance of structural changes, as well as some speculations about the regulation of such changes. Some phylogenetic aspects will be briefly discussed and related to ontogenetic aspects of differentiation.
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Abbreviations
- H1, H2A, H2B, H3, H4:
-
histones (animal cells)
- PH1, PH2:
-
plant histones corresponding to H2A, H2B
References
Adolph KW, Cheng SM, Laemmli UK (1977) Role of nonhistone proteins in metaphase chromosome structure. Cell 12: 805–816
Al-Hamdani MM, Atkinson ME, Mayhew TM (1979) Ultrastructural morphometry of blastogenesis I: Transformation of small lymphocytes stimulated in vivo with dinitrochlorobenzene. Cell Tissue Res 200: 495–509
Allfrey YG, Littau VC, Mirsky AE (1963) On the role of histones in regulating RNA synthesis in the cell nucleus. Proc Natl Acad Sei USA 49: 414–421
Altenburger W, Hörz W, Zachau HG (1976) Nuclease cleavage of chromatin at 100 nucleotide intervals. Nature (London) 264: 517–522
Bäk AL, Zeuthen J (1977) Higher-order structure of mitotic chromosomes. Cold Spring Harbor Symp Quant Biol 42: 367–377
Bakke AC, Wu J-R, Bonner J (1978) Chromatin structure in the cellular slime mold Dictyostelium discoideum. Proc Natl Acad Sci USA 75: 705–709
Balhorn R, Jackson V, Grauner D, Chalkley R (1975) Phosphorylation of the lysine-rich histones throughout the cell cycle. Biochemistry 14: 2504–2511
Barlow PW (1977) Determinants of nuclear chromatin structure in angiosperms. Ann Sci Nat Bot Biol Veg 18: 193–206
Barsotti P, Marinozzi V (1979) A morphological study on the early changes in hepatocyte nuclei induced by low doses of a-amanitin. J Submicrosc Cytol 11: 13–23
Basu S (1979) Evidence for superstruetures of wet chromatin. In: Nicolini CA (ed) Chromatin structure and funetion, Part B. Plenum, New York, pp 515–540
Baudy P, Bram S, Vastel D, Lepault J, Kitzis A (1976) Chromatin subunit small angle neutron scattering: a DNA-rich coil surrounds a protein-DNA core. Biochem Biophys Res Common 72: 176–183
Bennett MD (1973) Nuclear characters in plants. Brookhaven Symp Biol 25: 344–366
Bennett MD, Gustafson JP, Smith JB (1977) Variation in nuclear DNA in the genus Seeale. Chromosoma 61: 149–176
Benyajati C, Worcel A (1976) Isolation, characterization, and structure of the folded interphase genome of Drosophila melanogaster. Cell 9: 343–407
Berezney R (1979) Dynamic properties of the nuclear matrix. In: Busch H (ed) The cell nucleus Vol VII. Academic Press, London New York, pp 413–456
Berger NA, Petzold SJ, Berger SJ (1979) Association of ( ADP-ribose) synthesis with cessation of DNA synthesis and DNA fragmentation. Biochim Biophys Acta 564: 90–104
Blumenfeld M, Orf JW, Sina BJ, Kreber RA, Callahan MA, Snyders LA (1977) Satellite DNA, Hl histone, and heterochromatin in Drosophila virilis. Cold Spring Harbor Symp Quant Biol 42: 273–276
Bodansky S, Mintz LB, Holmes DS (1979) The mesokaryote Gyrodinium eohnii lacks nucleosomes. Biochem Biophys Res Commun 88: 1329–1336
Bode J, Standt U-D (1978) Structural aspects of histone complexes and nucleosomes revealed by the accessibility of cysteine side chains. Z Naturforsch 33c: 884–890
Bode J, Willmitzer L, Arfmann H-A, Wehling K (1979) Condensation of DNA and chromatin by histones Hl, H5 and protamines. The influence of a protein phosphorylation. Int J Biol Macromolec 1: 73–78
Bokhon’ko A, Reeder RH (1976) The subunit structure of mouse satellite chromatin. Biochem Biophys Res Commun 70: 146–152
Bonner J (1979a) Properties and composition of isolated chromatin. In: Nicolini CA (ed) Chromatin structure and funetion, Part A. Plenum, New York, pp 3–13
Bonner J (1979b) Expressed and nonexpressed portions of the genome: their Separation and their characterization. In: Nicolini CA (ed) Chromatin structure and funetion, Part A. Plenum, New York, pp 15–23
Bonner J, Chalkley GR, Dahmus M, Fambrough D, Fujimara F, Huang RCC, Hubermann J, Jensen R, Marushige K, Ohlenbusch H, Oliviera B, Widholm J (1968) Isolation and characterization of chromosomal proteins. Methods Enzymol 12B:3–
Bradbury EM (1978) Histone interactions, histone modifications and chromatin structure. Philos Trans R Soc London Ser B 283: 291–293
Bradbury EM, Inglis RJ, Matthews HR (1974a) Control of cell division by very lysine-rich histone ( Fl) phosphorylation. Nature (London) 247: 257–261
Bram S, Butler-Browne G, Baudy P, Ibel K (1975) Quaterny structure of chromatin. Proc Natl Acad Sei USA 72: 1043–1045
Brandt WF, Van Holt C (1975) Isolation and characterization of the histones from cycad pollen. FEBS Lett 51: 84–87
Brasch K (1978) Morphometric studies of chromatin structure and nuclear Organization: hepatic polyploidy and mammalian erythropoiesis. 9th Int Congr Electr Microsc, Toronto, Vol II, p 208
Brasch K, Setterfield G (1974) Structural Organization of chromosomes in interphase nuclei. Exp Cell Res 83: 175–185
Brasch K, Sinclair GD (1978) The Organization, composition and matrix of hepatocyte nuclei exposed to a-amanitin. Virchows Arch B 27: 193–204
Britten RJ, Davidson EH (1971) Repeated and non-repeated DNA sequences and a speculation on the origins of evolutionary novelty. Q Rev Biol 46: 111–138
Brown DB, Stack SM, Mitchell JB, Bedford JS (1979) Visualization of the interphase chromosomes of Ornithogalum virens and Muntiacus muntjak. Cytobiologie 18: 398–412
Brown FL, Musich PR, Maio JJ (1979) The repetitive sequence structure of component a DNA and its relationship to the nucleosomes of the African green monkey. J Mol Biol 131: 777–799
Brutlag D, Carlson M, Fry K, Hsieh TS (1977) DNA sequence Organization in Drosophila heterochromatin. Cold Spring Harbor Symp Quant Biol 42: 1137–1146
Burton DR, Butler MJ, Hyde JE, Phillips D, Skidmore CJ, Walker IO (1979) The interaction of histones with DNA: equilibrium binding studies. In: Nicolini CA (ed) Chromatin structure and funetion. Plenum, New York, pp 137–165
Busch H (ed) (1978) The cell nucleus, Vol IV, V: Chromatin. Academic Press, London New York
Camerini-Otero RD, Felsenfeld G (1977) Supercoiling energy and nucleosome formation: the role of the arginine-rich kernel. Nucl Acids Res 4: 1159–1181
Camerini-Otero RD, Sollner-Webb B, Felsenfeld G (1976) The Organization of histones and DNA in chromatin: evidence for an arginine-rich histone kernel. Cell 8: 333–347
Cameron LJ, Jeter JR (eds) (1975) Acidic proteins of the nucleus. Academic Press, London New York
Cameron IL, Pavlat WA, Jeter JR Jr (1979) Chromatin substrueture: an electron microscopic study of thin-sectioned chromatin subjected to sequential protein extraction and water swelling procedures. Anat Ree 194: 547–562
Campbell AM, Cotter RI, Pardon JF (1978) Light scattering measurements supporting helical structures for chromatin in Solution. Nucl Acids Res 5: 1571–1580
Capesius I, Nagl W (1978) Molecular and cytological characteristics of nuclear DNA and chromatin for angiosperm systematics: DNA diversiflcation in the evolution offour orchids. Plant Syst Evol 129: 143–166
Caplan AI, Niedergang C, Okazaki H, Mandel P (1979) Poly(ADP-ribose) levels as a funetion of chick limb mesenchymal cell development as studied in vitro and in vivo. Dev Biol 72: 102–109
Carlson RD, Olins DE (1976) Chromatin model calculations - arrays of spherical nubodies. Nucl Acids Res 3: 89–100
Carniel K (1979) Über bandartige Strukturen in den Chromozentren von Lupinus polyphyllus. Plant Syst Evol 131: 235–242
Carter CW Jr (1978) Histone packing in the nucleosome core particle of chromatin. Proc Natl Acad Sci USA 75: 3649–3653
Cohen JS (1980) DNA: is the backbone boring? Trends Bioch Res 5:58–60 Cold Spring Harbor Symp Quant Biol, Vol. 42: Chromatin (1977)
Cole RD (1977) Special features of the structures of Hl histones. In: Ts’o POP (ed) The molecular biology of the mammalian genetic apparatus. North-Holland, Amsterdam, pp 91–104
Comings DE (1974) The structure of human chromosomes. In: Busch H (ed) The cell nucleus, Vol. I. Academic Press, London New York, pp 537–563
Comings DE (1978) Mechanisms of chromosome banding and implications for chromosome structure. Annu Rev Genet 12: 25–46
Comings DE (1980) Arrangement of chromatin in the nucleus. Human Genetics 53: 131–144
Comings DE, Drets ME (1976) Mechanisms of chromosome banding IX. Are variations in DNA base composition adequate to account for quinacrine, Hoechst 33258 and daunomycin banding? Chromosoma 56: 199–211
Comings DE, Wallak AS (1978) DNA-binding properties of nuclear matrix proteins. J Cell Sei 34: 233–246
Compton JL, Bellard M, Chambon P (1976) Biochemical evidence of variability in the DNA repeat length in the chromatin of higher eukaryotes. Proc Natl Acad Sci USA 73: 4382–4386
Cook PR, Brazell IA (1975) Supercoils in human DNA. J Cell Sci 19: 261–279
Cremer C, Cremer T, Zorn C, Cioreanu V (1979) Partial UY-irradiation of Chinese hamster cell nuclei and detection of unscheduled DNA synthesis in interphase and metaphase. A tool to investigate the arrangement of interphase chromosomes in mammalian cells. Hoppe-Seyler’s Z Physiol Chem 360: 244–245
Crick FHC (1979) Aspects of chromatin structure. In: Engberg J, Klenow H, Leick Y (eds) Specific eukaryotic genes. Munksgaard, Copenhagen, pp 17–21
Crick FCH, Klug A (1975) Kinky helix. Nature 255: 530–533
DeLange RJ, Fambrough DM, Smith EL, Bonner J (1969) Calf and pea histone 4. II. Complete amino acid sequence of pea seedling histone 4; comparison with the homologous calf thymus histobe. J Biol Chem 244: 5669–5679
DeLange RJ, Hooper J, Smith EL (1973) Histone 3. III. Sequence studies on the eyanogen bromide peptides; complete amino acid sequence of calf thymus histone 3. J Biol Chem 248: 3261–3274
Deltour R, Gautier A, Fakan J (1979) Ultrastructural cytochemistry of the nucleus in Zea mays embryos during germination. J Cell Sci 40: 430–362
Derenzini M, Lorenzoni E, Marinozzi V, Barsotti P (1977) Ultrastructural cytochemistry of active chromatin in regenerating rat hepatocytes. J Ultrastruct Res 59: 250–262
Derenzini M, Pession-Brizzi A, Bonetti E, Novello F (1979) Relationship between ultrastrueture and funetion of hepatocyte chromatin: a study with adrenalectomized rats after cortisol administration. J Ultrastruct Res 67: 161–179
Doenecke D (1979) Analysis of accessible site in modified nucleosomes. Plant Syst Evol Suppl 2: 201–219
Douvas AS, Harrington CA, Bonner J (1975) Major nonhistone proteins of rat liver chromatin. Preliminary identification of myosin, actin, tubulin, and tropomyosin. Proc Natl Acad Sei USA 72: 3902–3906
Drumm N, Nagl W (1982) Loss of DNA and euchromatin in senescing leaf cells of Allium. Mech Ageing Devel 18: 103–110
Duerksen JD, Paul IJ (1976) Satellite DNA sequence content of polylysine-titritable and nuclease-resistant fraction of mouse liver hepatoma chromatin. Nucl Acids Res 3: 2277–2291
DuPraw EJ (1970) DNA and chromosome. Holt, Rinehart, Winston, New York
Elgin SCR, Bonner J (1970) Limited heterogeneity of the major nonhistone chromosomal proteins. Biochemistry 9: 4440–4447
Elgin SCR, Weintraub H (1975) Chromosomal proteins and chromatin structure. Annu Rev Biochem 44: 725–764
Erenpreis JG, Zirne RA, Demidenko OJ (1978) Electron microscopic Observation of nucleosomes in ultrathin sections of heparin-treated nuclei. Experientia 34: 882–883
Farina B, Menella MRF, Leone E (1979) Nucleic acids, histones and spermiogenesis: the poly(ADP ribose) Polymerase system. In: Salvatore F, Marino G, Volpe P (eds) Macromolecules in the Functioning Cell. Plenum, New York, pp 283–300
Fellenberg G (1974) Chromosomale Proteine. Ulmer, Stuttgart Felsenfeld G (1978) Chromatin. Nature (London) 271: 115–122
Finch JT, Klug A (1976) Solenoidal model for superstrueture in chromatin. Proc Natl Acad Sci USA 73: 1897–1901
Finch JT, Lutter LC, Rhodes D, Brown RS, Rushton B, Levitt M, Klug A (1977) Structure of nucleosome core particles of chromatin. Nature (London) 269: 29–36
Fittier F, Zachau HG (1979) Subunit structure of a-satellite DNA containing chromatin from African green monkey cells. Nucl Acids Res 7: 1–13
Franke WW, Scheer U (1978) Morphology of transcriptional units at different states of activity. Philos Trans R London Ser B 283: 333–342
Franke WW, Scheer U, Trendelenburg MF, Spring H, Zentgraf H (1976) Absence of nucleosomes in transcriptionally active chromatin. Cytobiologie 13: 401–434
Franke WW, Scheer U, Trendelenburg M, Zentgraf H, Spring H (1977) Morphology of transcriptionally active chromatin. Cold Spring Harbor Symp Quant Biol 42: 755–772
Franke WW, Scheer U, Spring H, Trendelenburg MF, Zentgraf HW (1979) Organization of nucleolar chromatin. In: Busch H (ed) The cell nucleus, Vol. VII. Academic Press, London New York, pp 49–95
Fuge H (1980) Local decondensation of chromatin at the surface of meiotic chromosomes during anaphase movement. Eur J Cell Biol
Fuhrmann B, Nagl W (1979) Chromatin Organization and repetitive DNA in Anacyclus and Anthemis ( Asteraceae ). Plant Syst Evol Suppl 2: 235–245
Galau GA, Chamberlin ME, Hough BR, Britten RJ, Davidson EH (1976) Evolution of repetitive and nonrepetitive DNA. In: Ayala FJ (ed) Molecular evolution. Sinauer, Sunderland, pp 220–224
Garel A, Axel R (1976) Selective digestion of transcriptionally active ovalbumin genes from oviduct nuclei. Proc Natl Acad Sei USA 73: 3966–3970
Germond JE, Hirt B, Oudet P, Gross-Bellard M, Chambon P (1975) Folding of the DNA double helix in chromatin-like structures from Simian virus 40. Proc Natl Acad Sci USA 72: 1843–1847
Germond, JE, Rouviere-Yaniv J, Yaniv M, Brutlag D (1979) Nicking-closing enzyme assembles nucleosome-like structures in vitro. Proc Natl Acad Sei USA 76: 3779–3783
Gigot C, Philipps G, Nicolaieff A, Hirth L (1976) Some properties of tobacco pro toplast chromatin. Nucl Acids Res 3: 2315–2329
Giri CP, Gorovsky MA (1980) DNase I sensitivity of ribosomal genes in isolated nucleosome core particles. Nucl Acids Res 8: 197–214
Gordon VC, Knobler CM, Olins DE, Schumaker VN (1978) Conformational changes of the chromatin subunit. Proc Natl Acad Sci USA 75: 660–663
Gottesfeld JM (1978) Organization of transcribed regions of chromatin. Philos Trans R Soc London Ser B 283: 343–357
Gottesfeld JM, Melton DA (1978) The length of nucleosome-associated DNA is the same in both transcribed and nontranscribed regions of chromatin. Nature (London) 273: 317–318
Gottesfeld JM, Murphy RF, Bonner J (1975) Structure of transcriptionally active chromatin. Proc Natl Acad Sei USA 72: 4404–4408
Grainger RM, Ogle RC (1978) Chromatin structure of the ribosomal RNA genes in Physarum polycephalum. Chromosoma 65: 115–126
Greilhuber J (1977) Why plant chromosomes do not show G-bands. Theor Appl Genet 50: 121–124
Greilhuber J, Speta F (1978) Quantitative analysis of C-banded karyotypes, and systematics in the cultivated species of the Scilla sibirica group ( Liliaceae ). Plant Syst Evol 129: 63–109
Greimers R, Deltour R (1981) Organization of transcribed and nontranscribed chromatin in isolated nuclei of Zea mays root cells. Eur J Cell Biol 23: 303–311
Griffith JD (1975) Chromatin structure: deduced from a minichromosome. Science 187: 1202–1203
Griffith JD, Christiansen G (1977) The multifunctional role of histone Hl, probed with the SV 40 minichromosome. Cold Spring Harbor Symp Quant Biol 42: 215–226
Gurley LR, Walters RA, Tobey RA (1973) Histone phosphorylation in late interphase and mitosis. Biochem Biophys Res Commun 50: 744–750
Gurley LR, Walters RA, Tobey RA (1974) Cell cycle-specific changes in histone phosphorylation associated with cell proliferation and chromosome condensation. J Cell Biol 60: 356–364
Holm PB (1976) The C and Q banding patterns of the chromosomes of Lilium longiflorum (Thunb). Carlsb Res Comm 41: 217–224
Hozier JC, Kaus R (1976) Subunit structure of chromosomes in mitotic nuclei of Physarum polycephalum. Chromosoma 57: 95–102
Hozier J, Renz M, Nehls P (1977) The chromosome fiber: evidence for an ordered superstructure of nucleosomes. Chromosoma 62: 301–317
Hsieh TS, Brutlag DL (1979) A protein that preferentially binds Drosophila satellite DNA. Proc Natl Acad Sci USA 76: 726–730
Hsu TC (1962) Differential rate in RNA synthesis between euchromatin and heterochromatin. Exp Cell Res 27: 332–334
Igo-Kemenes T, Zachau HG (1977) Domains in chromatin structure. Cold Spring Harbor Symp Quant Biol 42: 109–118
Ingle J, Timmis JN, Sinclair J (1975) The relationship between satellite DNA, ribosomal RNA gene redundnancy, and genome size. Plant Physiol 55: 496–501
Isenberg I (1978) Protein-protein interactions of histones. In: Busch H (ed) The cell nucleus, Vol. IV. Academic Press, London New York, pp 135–154
Isenberg I (1979) Histones. Annu Rev Biochem 48: 159–191
Jeanny JC, Gontcharoff M (1978) Etüde en microscopie electronique et par cytophotometrie ä balayage de la structure et de la distribution de la chromatine dans les noyaux des cellules cartilagineuses de Triturus cristatus ages au cours de la regeneration.
Wilh Roux’ Arch Dev Biol 184:195–211
Jeppersen PGN, Bankier AT (1979) A partial characterization of DNA fragments protected from nuclease degradation in histone-depleted metaphase chromosomes of the Chinese hamster. Nucl Acids Res 7: 49–67
Jerzmanowski A, Staron K (1980) Mg2+ as a trigger of condensation-decondensation transition of chromatin during mitosis. J Theor Biol 82: 41–46
Jerzmanowski A, Staron K, Tyniec-Kroenke B, Toczko K (1979) Chromatin condensation. Possible dehydrating and stabilizing factors. Biochim Biophys Acta 565: 356–364
John B, Miklos GLG (1979) Functional aspects of satellite DNA and heterochromatin. Int Rev Cytol 58: 1–114
Johnson EM, Littau VC, Allfrey VG, Bradbury EM, Matthews HR (1976) The subunit structure of chromatin from Physarum polycephalum. Nucl Acids Res 3: 3313–3329
Johnson EM, Campbell GR, Allfrey VG (1979) Different nucleosome structures on transcribing and nontranscribing ribosomal gene sequences. Science 206: 1192–1194
Jorcano JL, Ruiz-Carillo A (1979) H3-H4 Tetramer directs DNA and core histone octame assembly in the nucleosome core particle. Biochemistry 18: 768–774
Jump DB, Butt TR, Smulson M (1979) Nuclear protein modification and chromatin substrueture. 3. Relationship between poly(ADP)ribosylation and different functional forms of chromatin. Biochemistry 18: 983–990
Kiefer G, Sandritter W (1978) Anwendungsmöglichkeiten der automatischen Kernbildanalyse. Acta Histochem Suppl 20: 193–201
Kiryanov Gl, Manamshjan TA, Polyakov V Yu, Fais D, Chentsov Jus (1976) Levels of granular Organization of chromatin fibers. FEBS Lett 67: 323–327
Kitamura A, Tanigawa Y, Yamamoto T, Kawamura M, Doi S, Shimoyama M (1979) Glucocorticoid-induced reduetion of poly(ADP-ribose) synthetase in nuclei from chick embryo liver. Biochem Biophys Res Commun 87: 725–733
Kornberg RD (1974) Chromatin structure: a repeating unit of histones and DNA. Science 184: 868–871
Kornberg RD (1977) Structure of chromatin. Annu Rev Biochem 46: 931–954
Kraut W, Werner D (1979) Analysis of the most tightly bound proteins in eukaryotic DNA. Biochim Biophys Acta 564: 390–401
Kwiatkowska M, Maszewski J (1979) Changes in the content of Condensed chromatin during the cell cycle in antheridial filaments of Chara vulgaris L as related to DNA and RNA synthesis, 3H-actinomycin D binding and RNA Polymerase activity. Protoplasma 98: 363–367
Lacy E, Axel R (1975) Analysis of DNA of isolated chromatin subunits. Proc Natl Acad Sci USA 72: 3978–3982
Lafontaine JG (1974) Ultrastructural Organization of plant cell nuclei. In: Busch H (ed) The cell nucleus Vol I. Academic Press, London New York, pp 149–185
Lai V, Srivastava LM (1976) Nuclear changes during differentiation of xylem vessel elements. Cytobiologie 12: 220–243
Laird CD, Wilkinson LE, Foe VE, Chooi WY (1976) Analysis of chromatin- associated fiber arrays. Chromosoma 58: 169–192
Lake RS, Salzman NP (1972) Occurrence and properties of a chromatin associated flhistone Phosphokinase in mitotic Chinese hamster cells. Biochemistry 11: 4817–4826
Laskey RA, Honda BM, Mills AD, Finch J (1978) Nucleosomes are assembled by an acidic protein which binds histones and transfers them to DNA. Nature (London) 275: 416–420
Leffak IM, Grainger R, Weintraub H (1977) Conservative assembly and segregation of nucleosomal histones. Cell 12: 837–845
Lerman MI, Degtyarev SV (1978) Periodically interspersed repetitive sequences may govern
higher order DNA coiling in chromatin and chromosomes. Mol Biol Rep 4:117–120
Levy A, Jakob KM (1978) Nascent DNA in nucleosome-like structures from chromatin. Cell 14: 259–267
Levy-Wilson B (1979) Effects of nuclear disruption on the macromolecular composition of nucleosome subfractions. Nucl Acids Res 7: 2239–2254
Lewin B (1974) Gene expression - 2-eucaryotic chromosomes. Wiley and Sons, London New York
Li HJ (1976) Chromatin structure. Int J Biochem 7: 181–185
Li HJ, Eckhardt RA (1977) Chromatin and chromosome structure. Academic Press, London New York
Lilley DMJ (1978) Active chromatin structure. Cell Biol Int Rep 2: 1–10
Lima-de-Faria A (1975) The relation between chromomeres, replicons, operons, transcription units, genes, viruses and palindromes. Hereditas 81: 249–284
Lima-de-Faria A (1979) Prediction of gene location and Classification of genes according to the chromosome field. In: Engberg J, Klenow H, Leick V (eds) Specific eukaryotic genes. Munksgaard, Copenhagen, pp 25–38
Louie AJ, Dixon GM (1973) Kinetics of phosphorylation and dephosphorylation of testis histones and their possible role in determining chromosomal structure. Nature (New Biol) 243: 164–168
Lutz C, Nagl W (1980) A reliable method for the preparation and electron microscopic visualization of nucleosomes in higher plants. Planta 149: 408–410
Lyon MF (1968) Chromosomal and subchromosomal inactivation. Annu Rev Genet 2: 31–52
Maio JJ, Brown FL, Musich PR (1977) Subunit structure of chromatin and the Organization
of eukaryotic highly repetitive DNA: recurrent periodicites and models for the evolutionary origin of repetitive DNA. J Mol Biol 117:637–655
Maraldi NM, Capitarsi S, Cocco L, Manzoli FA (1979) Histones assembly and their structural role for nucleosome core. In: Nicolini CA (ed) Chromatin structure and function. Plenum, New York, pp 371–388
Marsden MPF, Laemmli UK (1979) Metaphase chromosome structure: Evidence for a radial loop model. Cell 17: 849–858
Martin T, Billings P, Levy A, Ozarslan S, Quinlan T, Swift H, Urber L (1973) Some properties of RNA-protein complexes from the nucleus of eukaryotic cells. Cold Spring Harbor Symp Quant Biol 38: 921–932
Mathis DJ, Gorovsky MA (1976) Subunit structure of rDNA-containing chromatin. Biochemistry 15: 750–755
Matthews HW, Bradbury EM (1978) The role of Hl histone phosphorylation in the cell cycle. Turbidity studies of HI-DNA interaction. Exp Cell Res 111: 343–351
McCready SJ, Akgrigg A, Cook PR (1979) Electron microscopy of intact nuclear DNA from human cells. J Cell Sei 39: 53–62
McGhee JD, Engel JD (1975) Subunit structure of chromatin is the same in plants and animals. Nature (London) 254: 449–450
McKnight SL, Miller OL Jr (1977) Electron microscopic analysis of chromatin replication in the cellular blastoderm Drosophila melanogaster embryo. Cell 12: 795–804
McKnight SL, Martin KA, Beyer AL, Miller OL Jr (1979) Visualization of fractionally active chromatin. In: Busch H (ed) The cell nucleus Vol VII. Academic Press, London New York, pp 97–122
Mello MLS (1978) Heterocromatina. Cien Cult 30: 290–303
Miklos GLG, John B (1979) Heterochromatin and satellite DNA in man: properties and prospects. Am J Hum Genet 31: 264–280
Miller OL, Bakken AH (1972) Morphological studies of transcription. Karol Symp Res Meth Reprod Endocrinol 5: 155–177
Miller OL Jr, Beatty BR (1969) Protrait of a gene. J Cell Physiol 74 Suppl 1: 225–232
Mirzabekov AD, Rieh A (1979) Asymmetrie lateral distribution of unshielded phosphate groups in nucleosomal DNA and its role in DNA bending. Proc Natl Acad Sci USA 76: 1118–1121
Mirzabekov AD, Shick VV, Belyavsky AN, Bavykin SG (1978) Primary Organization of nucleosome core particle of chromatin: Sequence of histone arrangement aling DNA. Proc Natl Acad Sei USA 75: 4184–4188
Moreno ML, Sogo JM, de la Torre C (1978) Higher plant nucleosomes. A micromethod for isolating and dispersing chromatin fibers. New Phytol 81: 681–683
Morris NR (1976) Nucleosome structure in Aspergillus nidulans. Cell 8: 357–363
Moser GC, Müller HJ (1979) Cell cycle dependent changes of chromosomes in mouse fibroblasts. Eur J Cell Biol 19: 116–119
Mullinger AM, Johnson RT (1979) The Organization of supereoiled DNA from human chromosomes. J Cell Sei 38: 369–389
Nadeau P, Palotta D, Lafontaine JG (1974) Electrophoretic study of plant histones: Comparison with vertebrate histones. Arch Biochem Biophys 161: 171–177
Nagl W (1969 a) Puffing of polytene chromosomes in a plant (Phaseolus vulgaris), Naturwissenschaften 56:221–222
Nagl W (1969 b) Correlation of structure and RNA synthesis in the nucleolus-organizing polytene chromosomes of Phaseolus vulgaris. Chromosoma 28:85–91
Nagl W (1970 a) Temperature-dependent functional structures in the polytene chromosomes of Phaseolus, with special reference to the nucleolus Organizers. J Cell Sci 6:87–107
Nagl W (1970b) The mitotic and endomitotic nuclear cycle in Allium carinatum. II. Relations between DNA replication and chromatin structure. Caryologia 23: 71–78
Nagl W (1974) Role of heterochromatin in the control of cell cycle duration. Nature (London) 249: 53–54
Nagl W ( 1976 a) Zellkern und Zellzyklen. Ulmer, Stuttgart
Nagl W (1976 b) Chromatin subunits visualized in common ultrathin section of Helianthus nuclei. Experientia 32:703–704
Nagl W (1977 a) Organization and replication of the eukaryotic chromosome. Progr Bot 39:132–152
Nagl W (1977 b) Early and late DNA replication in respectively Condensed and decondensed heterochromatin of Allium cepa. Protoplasma 91:389–407
Nagl W (1977c) Nuclear structures during cell cycles. In: Rost TL, Gifford EM Jr aulson JR, Laemmli UK (1977) The structure of histone-depleted metaphase chromosomes. Cell 12: 817–828
Peacock WJ, Lohe AR, Gerlach WL, Dunsmuir P, Dennis ES, Appels R (1977) Fine structure and evolution of DNA in heterochromatin. Cold Spring Harbor Symp Quant Biol 42: 1121–1135
Pederson T (1978) Chromatin-structure and gene transcription - nucleosomes permit a new synthesis. Int Rev Cytol 55: 1–22
Person C, Suzuki DT (1968) Chromosome structure - a model based on DNA replication. Can J Genet Cytol 10: 627–647
Philipps G, Gigot C (1977) DNA associated with nucleosomes in plants. Nucl Acids Res 4: 3617–3626
Polyakov V Yu, Kiryanov Gl, Manamshyan TA, Fais D, Chentsov YuS (1979) Ultrastructure of DNP fibrils and interchromatin granules in isolated nuclei from rat liver cells. Tsitologiya 21: 514–519
Popenko VI, Vengerov YuYu (1978) The effects of various conditions of chromatin isolation on the nucleosomal structure of the isolated chromatin. Mol Biol Rep 4: 45–50
Prunell A (1979) Random arrangement of nucleosomes on DNA in chromatin. FEBS Lett 107: 285–287
Prunell A, Kornberg RD, Lutter L, Klug A, Levitt M, Crick FHC (1979) Periodicity of DNase I digestion of chromatin. Science 204: 855–858
Rattemeyer M, Popp, FA, Nagl W (1981) Evidence of photon emission from DNA in living systems. Naturwiss 68: 572–573
Rattner JB, Hamkalo BA (1979) Nucleosome packing in interphase chromatin. J Cell Biol 81: 453–457
Rattner JB, Branch A, Hamkalo BA (1975) Electron microscopy of whole mount metaphase chromosomes. Chromosoma 52: 329–338
Razin SV, Mantieva VL, Georgiev GP (1979) The similarity of DNA sequences remaining bound to scaffold upon nuclease treatment of interphase nuclei and metaphase chromosomes. Nucl Acids Res 7: 1713–1735
Reeves R (1976) Ribosomal genes of Xenopus laevis: Evidence of nucleosomes in transcriptionally active chromatin. Science 194: 529–532
Reeves R (1978) Nucleosome structure of Xenopus oocyte amplified ribosomal genes. Biochemistry 17: 4908–4915
Renz M (1975) Preferential and cooperative binding of histone to chromosomal mammalian DNA. Proc Natl Acad Sei USA 72: 733–736
Renz M (1979) Heterogeneity of the chromosome fiber. Nucl Acids Res 6: 2761–2767
Risueno MC, de la Espina SMD (1979) Ultrastructural and cytochemical study of the quiescent root meristematic cell nucleus. J Submicrosc Cytol 11: 85–98
Rizzo PJ, Burghardt RC (1980) Chromatin structure in the unicellular algae Olisthodiscus luteus, Crypthecodinium cohnii, and Peridium balticum. Chromosoma 76: 91–99
Ruiz-Carillo A, Jorcano JL (1979) An octamer of core histones in Solution: central role of the H3-H4 tetramer in the self-assembly. Biochemistry 18: 760–768
Sans J, de la Torre C (1979) Proliferative index estimated by chromatin pattern analysis. Cell Biol Int Rep 3: 227–235
Sauter J, Ulrich J (1977) Cytophotometric investigation of DNA and RNA content in nuclei of active Strasburger cells in Pinus nigra var. austriaca ( Hoess) Badoux. Planta 137: 5–11
Sawicki W (1979) Chromatin pattern in situ: Dependence upon cell cycle, preimplantation development and cellular aging in vitro. In: Nicolini CA (ed) Chromatin structure and function, Part B. Plenum, New York, pp 667–681
Scheer U, Zentgraf H (1978) Nucleosomal and supranucleosomal Organization of transcriptionally inactive rDNA circles in Dytiscus oocytes. Chromosoma 69: 243–254
Scheer U, Spring H, Trendelenburg MF (1979) Organization of transcriptionally active chromatin in lampbrush chromosomes. In: Busch H (ed) The cell nucleus Vol VII. Academic Press, London New York, pp 4–47
Schmalenberger B (1980) Differentiation of the Guinea pig eye: Nuclear ultrastructure template activity and DNA content. Protoplasma 103: 377–391
Schmalenberger B, Nagl W (1979) Different DNA content, chromatin condensation and transcription activity in retina cell nuclei of the Guinea pig. Plant Syst Evo Suppl 2: 119–125
Schnedl W (1974) Banding patterns in chromosomes. Int Rev Cytol 4: 237–272
Schweizer D (1976) Reverse fluorescent chromosome banding with chromomycin an DAPI. Chromosoma 58: 307–324
Schweizer D (1979) Fluorescent chromosome banding in plants: Applications, mechanisms and implications for chromosome structure. Proc 4th John Innes Symp. John Innes Inst, Norwich, VK, pp 61–72
Schweizer D, Ehrendorfer F (1976) Giemsa banded karyotypes, systematics and evolution in Anacyclus ( Asteraceae, Anthemideae). Plant Syst Evol 126: 107–148
Sedat J, Manuelidis L (1977) A direct approach to the structure of eukaryotic chromosomes. Cold Spring Harbor Symp Quant Biol 42: 331–350
Setterfield G, Sheinin R, Dardick I, Kiss G, Dubsky M (1978) Structure of interphase nuclei in relation to the cell cycle. J Cell Biol 77: 246–263
Sevall JS, Jagodzinski LL, Tsai S, Castro CE, Lee D (1978) Nonhistone proteins an gene Organization. In: Busch H (ed) The cell nucleus Vol IV. Academic Press, London New York, pp 319–343
Smith SG (1945) Heteropycnosis as a means of diagnosing sex. J Hered 36: 194 - 196
Sobell HM, Tsai CC, Gilbert SG, Jain SC, Sakore TD (1976) Organization of DNA in chromatin. Proc Natl Acad Sei USA 73: 3069–3072
Sonnenbichler J (1969) Substructures of chromatin. Nature (London) 223: 205–206
Sonnenbichler J (1979) Advances in chromatin reasearch. Naturwissenschaften 66: 244–250
Spadafora C, Noviello L, Geraci G ( 1976 b) Chromatin Organization in nuclei of sea urchin embryos. Comparison with the chromatin Organization of the sperm. Cell Differ 5: 225–231
Spiker S (1975) An evolutionary comparison of plants histones. Biochim Biophys Acta 400: 461–467
Spiker S (1976) Expression of parental histone genes in the intergeneric hybrid Triticale hexaploide. Nature (London) 259: 418–420
Spiker S, Krishnaswamy L (1973) Constancy of wheat histones during development. Planta 110: 71–76
Spring H, Trendelenburg MF, Scheer U, Franke WW, Herth W (1974) Structural and biochemical studies of the primary nucleus of two green algal species, Acetabularia mediterranea and A. major. Cytobiologie 10: 1–65
Stalder J, Braun R (1978) Chromatin structure of Physarum polycephalum plasmodia and amoebae. FEBS Lett 90: 223–227
Stein G, Stein J, Kleinsmith LJ (eds ) (1978) Chromatin and chromosomal prote in research.
Meth Cell Biol Vol 16. Academic Press, London New York
Stein A, Whitlock JP Jr, Bina M (1979) Acidic polypeptides can assemble both histones and chromatin in vitro at physiological ionic strength. Proc Natl Acad Sci USA 76: 5000–5004
Steinmetz M, Streeck RE, Zachau HG (1978) Closely spaced nucleosome cores in recon stituted histone-DNA complexes and histone-Hl-depleted chromatin. Eur J Biochem 83: 615–628
Stoddard RW (1979) Nuclear glycoconjugates and their relation to malignancy. Biol Rev 54: 199–235
Strätling WH, Müller U, Zentgraf H (1978) Supranucleosomal structure of chromatin. Cell Biol Int Rep 2: 495–499
Suda M, Iwai K (1979) Identification of suberimate cross-linking sites of four histone sequences in Hl-depleted chromatin. Histone arrangement in nucleosome core. J Biochem 86: 1659–1670
Sussman JL, Trifonov EN (1978) Possibility of nonlinked packing of DNA in chromatin. Proc Natl Acad Sci USA 75: 103–107
Sutton WD (1972) Chromatin packing, repeated sequences and gene control. Nature New Biol 237: 70–71
Tanaka R (1971) Types of resting nuclei in Orchidaceae. Bot Mag 84: 118–122
Taylor JH (1979) Chromosome structure. Academic Press, London New York
Thoma F, Koller Th, Klug A (1979) Involvement of histone Hl in the Organization of the nucleosome and of salt-dependent superstruetures of chromatin. J Cell Biol 83: 403–427
Thomas JO (1978) Chromatin structure. In: Clark BFC (ed) International review of biochemistry of nucleic acids, Vol 17/11. Univ Park Press, Baltimore, pp 181–232
Timmis JN, Deumling B, Ingle J (1975) Localization of satellite DNA sequences in nuclei and chromosomes of two plants. Nature (London) 257: 152–155
Towill LE, Nooden LD (1973) An electrophoretic analysis of the acid-soluble chromosomal proteins from different organs of maize seedlings. Plant Cell Physiol 14: 851–863
Trifonov E (1978) The helical model of the nucleosome core. Nucl Acids Res 5: 1371–1380
Trifonov E, Bettecken T (1979) On the orientational nature of sensitivity of nucleosomal DNA to nuclease digestion. In: Balaban M (ed) Molecular mechanisms of biological recognition. Elsevier North-Holland, Amsterdam, pp 233–234
Trifonov EN, Sussman JL (1979) Smooth bending of DNA in chromatin. In: Balaban M (ed) Molecular mechanisms of biological recognition. Elsevier North-Holland, Amsterdam, pp 227–232
Tschermak-Woess E (1963) Strukturtypen der Ruhekerne von Pflanzen und Tieren. Protoplasmatologia VI/1. Springer, Vienna, New York
Van de Sande JH, Liu CC, Jorgenson KF (1977) Reverse banding on chromosomes produced by a guanosine-cytosine specific DNA binding antibiotic: olivomyein. Science 195: 400–402
Varshavsky AJ (1976) Structural and functional Organization of eukaryotic chromosomes. Biol Zentralbl 95: 301–316
Vengerov YuYu, Popenko VI, Lang H, Tikonenko AS (1978) Organization of nucleosomes in chromatin fibres. Biol Zentralbl 97: 29–38
Vogt VM, Braun R (1976) Repeated structure of chromatin in metaphase nuclei of Physarum. FEBS Lett 64: 190–192
Wagner KG, Bode J, Hofmann KW, Willmitzer L (1978) Studies on the mechanism of DNA condensation by basic chromosomal proteins. Stud Biophys 67:85–86 microfiche 2/7-16
Wang TY, Kostraba NC (1978) Proteins involved in positive and negative control of chromatin funetion. In: Busch H (ed) The cell nucleus Vol IV. Academic Press, London New York, pp 289–317
Weintraub H (1974) The assembly of newly replicated DNA into chromatin. Cold Spring Harbor Symp Quant Biol 38: 247–256
Weintraub H (1979) Assembly of an active chromatin structure during replication. Nucl Acids Res 7: 781–792
Weintraub H, Groudine M (1976) Transcriptionally active and inactive conformations of chromosomal subunits. Science 193: 848–856
Weintraub H, Worcel A, Alberts B (1976) A model for chromatin based upon two symetrically paired half-nucleosomes. Cell 9: 409–417
Weischet WO (1979) On the de novo formation of compact oligonucleosomes at high ionic strength. Evidence for nucleosomal sliding in high salt. Nucl Acids Res 7: 291–304
Wigler MH, Axel R (1976) Nucleosomes in metaphase chromosomes. Nucl Acids Res 3: 1463–1471
Worcel A (1977) Molecular architecture of the chromatin fiber. Cold Spring Harbor Symp Quant Biol 42: 313–324
Worcel A, Benyajati C (1977) Higher order coiling of DNA in chromatin. Cell 12: 83–100
Wunderlich F (1978) Die Kernmatrix: Dynamisches Proteingerüst im Zellkern. Naturwiss Rundsch 31: 282–288
Yakura K, Fukuei K, Tanifuji S (1978) Chromatin Subunit structure in different tissues of higher plants. Plant Cell Physiol 19: 1381–1390
Yathindra N (1979) DNA flexibility and tertiary folding. A model for superfolding of DNA in chromatin. Curr Sei 48: 753–756
Yunis JJ, Yasmineh WG (1971) Heterochromatin, satellite DNA, and cell funetion. Science 174: 1200–1209
Zama M, Olins DE, Prescott B, Thomas GJ Jr (1978) Nucleosome conformation: pH and organic solvent effects. Nucl Acids Res 5: 3881–3897
Zeuthen J, Bäk P, Bäk AL (1979) Chromosomal unit fibers in Drosophila. Chromosoma 73: 317–326
Zinke M (1979) New model of DNA and higher histone Organization in chromatin- explanation of conformational transitions in chromatin structure and their dissociation. Stud Biophys 75: 107–130
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Nagl, W. (1982). Nuclear Chromatin. In: Parthier, B., Boulter, D. (eds) Nucleic Acids and Proteins in Plants II. Encyclopedia of Plant Physiology, vol 14 / B. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-68347-3_1
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