Abstract
Classical forward genetics identifies genes based upon the phenotype that results when the gene is mutated; the gene itself can then be molecularly cloned. This is in contrast to reverse genetics, in which the consequences of the absence of gene products are determined either through the use of inhibitors of the gene products, the expression of dominant negative alleles, or, in the case of mice, the use of homologous recombination in embryonic stem (ES) cells to create a null allele of the gene. The primary distinction between the reverse genetic approaches and the forward genetic approach is that in the former, the gene products must be identified prior to the assessment of their role in a biological process, while in the latter it is their essential role in that process which identifies them. If one’s interest is to define the role of a specific protein, a specific signaling pathway, or a gene whose human homologue is implicated in a disease, then the reverse genetics approaches are ideal. However, if one’s primary interest is, for example, a developmental process, the most straight forward way to identify the genes essential or that process is to perform a forward genetic screen.
This is a preview of subscription content, log in via an institution.
Buying options
Tax calculation will be finalised at checkout
Purchases are for personal use only
Learn about institutional subscriptionsPreview
Unable to display preview. Download preview PDF.
References
Kimmel CB (1989) Genetics and early development of zebrafish. Trends Genet 5:283–288
Nüsslein-Volhard C (1994) Of flies and fishes. Science 266:572–574
Streisinger G, Walker C, Dower N, Knauber D, Singer F (1981) Production of clones of homozygous diploid zebrafish (Brachydanio rerio). Nature 291:293–296
Streisinger G, Singer F, Walker C, Knaiber D, Dower N (1986) Segregation analysis and gene-centromere distances in zebrafish. Genetics 112:311–319
Driever W, Solnica-Krezel L, Schier AF, Neuhauss SCF, Malicki J, Stemple DL, Stainier DYR, Zwartkruis F, Abdelilah S, Rangini Z, Belak J, Boggs C (1996) A genetic screen for mutations affecting embryogenesis in zebrafish. Development 123:37–46
Eisen J (1996) Zebrafish make a big splash. Cell 87:969–977
Haffter P, Granato M, Brand M, Mullins MC, Hammerschmidt M, Kane DA, Odenthal J, van Eeden FJM, Jiang Y-J, Heisenberg C-P, Kelsh RN, Furutani-Seiki M, Vogelsang E, Beuchle D, Schach U, Fabian C, Niisslein-Volhard C (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development 123:1–36
Mullins MC, Hammerschmidt M, Haffter P, Nüsslein-Volhard C(1994) Large-scale mutagenesis in the zebrafish: in search of genes controlling development in a vertebrate. Curr Biol 4:189–202
Solnica-Krezel L, Schier AF, Driever W (1994) Efficient recovery of ENU-induced mutations from the zebrafish germline. Genetics 136:1401–1420
Johnson SL, Gates MA, Johnson M, Talbot WS, Home S, Baik K, Rude S, Wong JR, Postlethwait JH (1996) Centromere-linkage analysis and consolidation of the zebrafish genetic map. Genetics 142:1277–1288
Knapik EW, Goodman A, Ekker M, Chevrette M, Delgado J, Neuhauss S, Shimoda N, Driever W, Fishman MC, Jacob HJ (1998) A microsatellite genetic linkage map for zebrafish (Danio rerio). Nat Genet 18:338–343
Postlethwait JH, Talbot WS (1997) Zebrafish genomics: from mutants to genes. Trends Genet 13:183–190
Cooley L, Kelley R, Sprading A (1988) Insertional mutagenesis of the Drosophila genome with single P elements. Science 239:1121–1128
Friedrich G, Soriano P (1991) Promoter traps in embryonic stem cells: a genetic screen to identify and mutate developmental genes in mice. Genes Dev 5:1513–1523
Harbers K, Kuehn M, Delius H, Jaenisch R (1984) Insertion of retrovirus into the first intron of al (I) collagen gene leads to embryonic lethal mutation in mice.Proc Natl Acad Sci USA 81:1504–1508
Jaenisch R (1988) Transgenic Animals. Science 240:1468–1474
Jaenisch R, Harbers K, Schnieke A, Lohler J, Chumakov I, Jahner D, Grotkopp D, Hoffman E (1983) Germline integration of Moloney murine leukemia virus at the Mov 13 locus leads to recessive lethal mutation and early embryonic death. Cell 32:209–216
Meisler M (1992) Insertional mutation of “classical” and novel genes in transgenic mice. Trends Genet 8:341–344
Palmiter RD, Brinster RL (1986) Germ-line transformation of mice. Annu Rev Genet 20:465–499
Spradling AC, Stern DM, Kiss I, Roote J, Laverty T, Rubin GM (1995) Gene disruptions using P transposable elements: an integral component of the Drosophila genome project. Proc Natl Acad Sci USA 92:10824–10830
Woychik RP, Maas RL, Zeller R, Vogt T, Leder P (1990) ‘Formins’: proteins deduced from the alternative transcripts of the limb deformity gene. Nature 346:850–855
Culp P, Nüsslein-Volhard C, Hopkins N (1991) High-frequency germ-line transmission of plasmid DNA sequences injected into fertilized zebrafish eggs. Proc Natl Acad Sci USA 88:7953–7957
Stuart GW, McMurray JV, Westerfield M (1988) Replication, integration and stable germ-line transmission of foreign sequences injected into early zebrafish embryos. Development 103:403–412
Burns JC, Friedmann T, Driever W, Burrascano M, Yee JK (1993) Vesicular stomatitis virus G glycoprotein pseudotyped retroviral vectors: concentration to very high titer and efficient gene transfer into mammalian and nonmammalian cells. Proc Natl Acad Sci USA 90: 8033–8037
Emi N, Friedmann T, Yee J-K (1991) Pseudotype formation of murine leukemia virus with the G protein of vesicular stomatitis virus. J Virol 65:1202–1207
Gaiano N, Allende M, Amsterdam A, Kawakami K, Hopkins N (1996) Highly efficient germ-line transmission of proviral insertions in zebrafish. Proc Natl Acad Sci USA 93:7777–7782
Hopkins N (1993) High titers of retrovirus (vesicular stomatitis virus) pseudotypes, at last. Proc Natl Acad Sci USA 90:8759–8760
Lin S, Gaiano N, Culp P, Burns JC, Friedman T, Yee J-K, Hopkins N (1994) Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish. Science 265:666–669
Allende ML, Amsterdam A, Becker T, Kawakami K, Gaiano N, Hopkins N (1996) Insertional mutagenesis in zebrafish identifies two novel genes, pescadillo and dead eye, essential for embryonic development. Genes Dev 10:3141–3155
Amsterdam A, Yoon C, Allende M, Becker T, Kawakami K, Burgess S, Gaiano N, Hopkins N (1997) Retrovirusmediated insertional mutagenesis in zebrafish and identification of a molecular marker for embryonic germ cells. Cold Spring Harbor Symp Quant Biol 62:437–450
Gaiano N, Amsterdam A, Kawakami K, Allende M, Becker T, Hopkins N (1996) Insertional mutagenesis and rapid cloning of essential genes in zebrafish. Nature 383:829–832
Schier AF, Joyner AL, Lehmann R, Talbot WS (1996) From screens to genes: prospects for insertional mutagenesis in zebrafish. Genes Dev 10:3077–3080
Barker D, Wu H, Hartung S, Breindl M, Jaenisch R (1991) Retrovirus-induced insertional mutagenesis: mechanism of collagen mutation in Mov 13 mice. Mol Cell Biol 11:5154–5163
Seperack PK, Mercer JA, Strobel M, Copeland NG, Jenkins NA (1995) Retroviral sequences located within an intron of the Dilute gene alter dilute expression in a tissue-specific manner. EMBO 14:2326–2332
Withers-Ward ES, Kitamura Y, Barnes JP, Coffin JM (1994) Distribution of targets for avian retrovirus DNA integration in vivo. Genes Dev 8:1473–1487.
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 1999 Springer-Verlag Berlin · Heidelberg New York
About this chapter
Cite this chapter
Amsterdam, A., Hopkins, N. (1999). Insertional Mutagenesis in Zebrafish. In: Russo, V.E.A., Cove, D.J., Edgar, L.G., Jaenisch, R., Salamini, F. (eds) Development. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-59828-9_22
Download citation
DOI: https://doi.org/10.1007/978-3-642-59828-9_22
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-64141-1
Online ISBN: 978-3-642-59828-9
eBook Packages: Springer Book Archive