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Two-Dimensional Electrophoresis with Carrier Ampholytes

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Part of the book series: Principles and Practice ((PRINCIPLES))

Abstract

Two-dimensional (2-D) gel electrophoresis, which was originally described by O’Farrell (1975), separates proteins in the first dimension according to their isoelectric point, and in the second dimension according to their molecular weight. It offers the opportunity of separating several hundred proteins from a total cellular extract. In combination with the recent development of methods of protein identification based on microsequencing, amino acid composition and mass spectrometry, the technique of 2-D gel electrophoresis now provides an invaluable tool for proteomic studies.

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References

  • An der Lan B, Chrambach A (1985) Analytical and preparative gel electrofocusing. In: Hames BD, Rickwood D (eds) Gel electrophoresis of proteins. A practical approach. IRL Press, Oxford

    Google Scholar 

  • Ansorge W (1982) Fast visualization of protein bands by impregnation in potassium permanganate and silver nitrate. In: Stathakos D, (ed) Electrophoresis, 82. Walter de Gruyter, Berlin, pp 235–242

    Google Scholar 

  • Bjelqvist B, Ek K, Righetti PG, Gianazza E, Görg A, Westermeier R, Postel W (1982) Isoelectric focusing in immobilised pH gradients: principle, methodology and some applications. J Biochem Biophys Methods 6: 317–339

    Article  Google Scholar 

  • Blomberg A, Blomberg L, Fey SJ, Mose-Larsen P, Larsen PM, Roepstorff P, Degand P, Boutry M, Posch A, Görg A (1995) Interlaboratory reproducibility of yeast protein patterns analyzed by immobilized pH gradient two-dimensional gel electrophoresis. Electrophoresis 16: 1935–1945

    Article  PubMed  CAS  Google Scholar 

  • Boucherie H, Dujardin G, Kermorgant M, Monribot C, Slonimski P, Perrot M (1995) Two-dimensional protein map of Saccharomyces cerevisiae: construction of a gene-protein index. Yeast 11: 601–613

    Article  PubMed  CAS  Google Scholar 

  • Boucherie H, Sagliocco F, Joubert R, Maillet I, Labarre J, Perrot M (1996) Two-dimensional gel protein database of Saccharomyces cerevisiae. Electrophoresis 17: 1683–1699

    Article  PubMed  CAS  Google Scholar 

  • Corbett J, Dunn MJ, Posch A, Görg A (1994) Positional reproducibility of protein spots in two-dimensional gel electrophoresis using immobilized pH gradient isoelectric focusing in the first dimension: an interlaboratory comparison. Electrophoresis 15: 1205–1211

    Article  PubMed  CAS  Google Scholar 

  • Dunbar BS (1987) Sample preparation for electrophoresis; Method for isoelectric focusing. In: Dunbar BS (ed) Two dimensional electrophoresis and immunological techniques. Plenum Press, New York

    Chapter  Google Scholar 

  • Dunn MJ (1993) Gel electrophoresis of proteins. BioS Scientific Publishers Alden Press, Oxford

    Google Scholar 

  • Garreis JI (1983) Quantitative two-dimensional gel electrophoresis of proteins. Methods Enzymol 100: 411–423

    Article  Google Scholar 

  • Garrels JI (1989) The QUEST system for quantitative analysis of two-dimensional gels. J Biol Chem 264: 5269–5282

    PubMed  CAS  Google Scholar 

  • Garrels JI, Futcher B, Kobayashi R, Latter GI, Schwender B, Volpe T, Warner JR, McLaughlin CS (1994) Protein identification for a Saccharomyces cerevisiae protein database. Electrophoresis 11: 1466–1490

    Article  Google Scholar 

  • Garrels JI, McLaughlin CS, Warner JR, Futcher B, Latter GI, Kobayashi R, Schwender B, Volpe T, Anderson DS, Mesquita-Fuentes R, Payne WE (1997) Proteome studies of Saccharomyces cerevisiae: identification and characterization of abundant proteins. Electrophoresis 18: 1347–1360

    Article  PubMed  CAS  Google Scholar 

  • Gevaert K, Verscheide J-L, Puype M, Van Damme J, Goethals M, De Boeck S, Vandekerckhove S (1996) Structural analysis and identification of gel-purified proteins, available in the femtomole range, using a novel computer program for peptide sequence assignment, by matrix-assisted laser desorption ionization-reflectron time-of-flight-mass spectrometry. Electrophoresis 17: 918–924

    Article  PubMed  CAS  Google Scholar 

  • Johnston RF, Pickett SC, Barker DL (1990) Autoradiography using storage phosphor technology. Electrophoresis 11: 355–360

    Article  PubMed  CAS  Google Scholar 

  • Klose J (1975) Protein mapping by combined isoelectric focusing and electrophoresis in mouse tissues. A novel approach to testing for induced point mutation in mammals. Humangenetik 26: 231–243

    PubMed  CAS  Google Scholar 

  • Klose J, Feller M (1981) Two-dimensional electrophoresis of membrane and cytosol proteins of mouse liver and brain. Electrophoresis 2: 12–24

    Article  CAS  Google Scholar 

  • Klose J, Kobalz U (1995) Two-dimensional electrophoresis of proteins: an updated protocol and implications for a functional analysis of the genome. Electrophoresis 16: 1034–1059

    Article  PubMed  CAS  Google Scholar 

  • Kristensen DB, Inamatsu M, Yoshizato K (1997) Elution concentration of proteins cut from two-dimensional polyacrylamide gels using Pasteur pipettes. Electrophoresis 18: 2078–2084

    Article  PubMed  CAS  Google Scholar 

  • Link AJ, Robison K, Church GM (1997) Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12. Electrophoresis 18: 1259–1313

    Article  PubMed  CAS  Google Scholar 

  • Lopez MF, Patton WF (1997) Reproducibility of polypeptide spot positions in two-dimensional gels run using carrier ampholytes in the isoelectric focusing dimension. Electrophoresis 18: 338–343

    Article  PubMed  CAS  Google Scholar 

  • Maillet I, Lagniel G, Perrot M, Boucherie H, Labarre J (1996) Rapid identification of yeast proteins on two-dimensional gels. J Biol Chem 271: 10263–10270

    Article  PubMed  CAS  Google Scholar 

  • O’Farrell PH (1975) High resolution two-dimensional electrophoresis of proteins. J Biol Chem 250: 4007–4021

    PubMed  Google Scholar 

  • O’Farrell PZ, Goodman HM, O’Farrell PH (1977) High resolution two-dimensional electrophoresis of basic as well as acidic proteins. Cell 12: 1133–1142

    Article  PubMed  Google Scholar 

  • Rabilloud T (1996) Solubilization of proteins for electrophoretic analyses. Electrophoresis 17: 813–829

    Article  PubMed  CAS  Google Scholar 

  • Ramagli LS, Rodriguez LV (1985) Quantitation of microgram amounts of protein in two-dimensional polyacrylamide gel electrophoresis sample buffer. Electrophoresis 6: 559–563

    Article  CAS  Google Scholar 

  • Rasmussen H-H, Van Damme J, Puype M, Celis E-J, Vandekerkhove J (1991) Microsequencing of proteins recorded in human two-dimensional gel protein databases. Electrophoresis 12: 873–882

    Article  PubMed  CAS  Google Scholar 

  • Reynolds JA, Tanford C (1970) Binding of dodecyl sulfate to proteins at high binding ratios. Possible implications for the state of proteins in biological membranes. Proc Natl Acad Sci USA 66: 1002–1007

    Article  PubMed  CAS  Google Scholar 

  • Rickwood D, Alec J, Chambers A, Spragg SP (1990) Two-dimensional gel electrophoresis. In: Hames BD, Rickwood D (eds) Gel electrophoresis of proteins. A practical approach. IRL Press, Oxford

    Google Scholar 

  • Schevchenko A, Jensen ON, Podtelejnikov AV, Sagliocco F, Wilm M, Vorme O, Mortensen P, Schevchenko A, Boucherie H, Mann M (1996) Linking genome and proteome by mass spectrometry: large scale identification of yeast proteins from two-dimensional gels. Proc Natl Acad Sci USA 93: 14440–14445

    Article  Google Scholar 

  • Weber K, Osborn M (1969) The reliability of molecular weight determinations by dodecyl sulfate polyacrylamide gel electrophoresis. J Biol Chem 244: 4406–4412

    PubMed  CAS  Google Scholar 

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© 2000 Springer-Verlag Berlin Heidelberg

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Monribot, C., Boucherie, H. (2000). Two-Dimensional Electrophoresis with Carrier Ampholytes. In: Rabilloud, T. (eds) Proteome Research: Two-Dimensional Gel Electrophoresis and Identification Methods. Principles and Practice. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-57105-3_3

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  • DOI: https://doi.org/10.1007/978-3-642-57105-3_3

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-65792-7

  • Online ISBN: 978-3-642-57105-3

  • eBook Packages: Springer Book Archive

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