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Role of the Ku Autoantigen in V(D)J Recombination and Double-Strand Break Repair

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Molecular Analysis of DNA Rearrangements in the Immune System

Part of the book series: Current Topics in Microbiology and Immunology ((CT MICROBIOLOGY,volume 217))

Abstract

All cells have biochemical pathways for repairing DNA double-strand breaks induced by ionizing radiation (X-rays) and oxidative metabolism. Lymphoid cells also have a V(D)J recombination pathway for rearranging B cell immunoglobulin or T cell receptor genes (Lewis 1994a). V(D)J recombination involves the cleavage of chromosomal DNA and subsequent resolution of the double-strand breaks. In the past few years, it has become clear that the two pathways share a number of common factors.

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References

  • Anderson C (1993) DNA damage and the DNA-activated protein kinase. Trends Biochem Sci 18:433–437

    Article  PubMed  CAS  Google Scholar 

  • Beall E, Admon A, Rio D (1994) A Drosophila protein homologous to the human p70 Ku autoimmune antigen interacts with the P transposable element inverted repeats. Proc Natl Acad Sci USA 91:12681–12685

    Article  PubMed  CAS  Google Scholar 

  • Biedermann K, Sun J, Giaccia A, Tosto L, Brown J (1991) Scid mutation in mice confers hypersensitivity to ionizing radiation and a deficiency in DNA double-strand break repair Proc Natl Acad Sci USA 88:1394–1397

    Article  PubMed  CAS  Google Scholar 

  • Blier PR, Griffith AJ, Craft J, Hardin JA (1992) Binding of Ku protein to DNA: measurement of affinity for ends and demonstration of binding to nicks. J Biol Chem 268:7594–7601

    Google Scholar 

  • Blunt T Finnie N, Taccioli G, Smith G, Demengeot J, Gottlieb T, Mizuta R, Varghese A, Alt F, Jeggo R Jackson S (1995) Defective DNA-dependent protein kinase activity is linked to V(D)J recombination and DNA repair defects associated with the murine Scid mutation. Cell 80:813–823

    Article  PubMed  CAS  Google Scholar 

  • Bosma M, Carroll A (1991) The SCID mouse mutant: definition, characterization, and potential uses. Annu Rev Immunol 9:323–350

    Article  PubMed  CAS  Google Scholar 

  • Boubnov N, Wills Z, Weaver D (1993) V(D)J recombination coding junction formation without DNA homology: processing of coding termini. Mol Cell Biol 13:6957–6968

    PubMed  CAS  Google Scholar 

  • Boubnov NV, Hall KT, Wills Z, Lee SE, He DM, Benjamin DM, Pulaski CR, Band H, Reeves W, Hendrickson EA, Weaver DT (1995) Complementation of the ionizing radiation sensitivity, DNA end binding, and V(D)J recombination defects of double-strand break repair mutants by the p86 Ku autoantigen. Proc Natl Acad Sci USA 92:890–894

    Article  PubMed  CAS  Google Scholar 

  • Cai Q-Q, Plet A, Imbert J, Lafage-Pochitaloff M, Cerdan C, Blanehard J-M (1994) Chromosomal location and expression of the genes coding for Ku p70 and p80 in human cell lines and normal tissues. Cytogenet Cell Genet 65:221–227

    Article  PubMed  CAS  Google Scholar 

  • Cao Q, Pitt S, Leszyk J, Baril E (1994) DNA-dependent ATPase from HeLa cells is related to human Ku autoantigen. Bioehemistn 33:8548–8557

    Article  CAS  Google Scholar 

  • Chen DJ, Marrone BL, Nguyen T, Staekhouse M, Zhao Y Siciliano MJ (1994) Regional assignment of a human DNA repair gene (XRCC5) to 2q35 by X-ray hybrid mapping. Genomics 21:423–427

    Article  PubMed  CAS  Google Scholar 

  • Errami A, Smider V Rathmell W, He D, Hendrickson E, Zdzienieka M, Chu G (1996) Ku86 defines the genetic defect and restores X-ray resistance and V(D)J recombination to complementation group 5 hamster cells. Mol Cell Biol 16:1519–1526

    PubMed  CAS  Google Scholar 

  • Falzon M, Fewell JW, Kuff EL (1993) EBP-80, a transcription factor closely resembling the human autoantigen Ku, recognizes single-to double-strand transitions in DNA. J Biol Chem 268:10546–10552

    PubMed  CAS  Google Scholar 

  • Feldmann H, Winnaeker E (1993) A putative homologue of the human autoantigen Ku from Saccharomyces cerevisiae. J Biol Chem 268:12895–12900

    PubMed  CAS  Google Scholar 

  • Fulop G, Phillips R (1990) The Scid mutation in mice causes a general defect in DNA repair. Nature 347:479–482

    Article  PubMed  CAS  Google Scholar 

  • Gerstein R, Lieber MR (1993) Extent to which homology can constrain coding exon junctional diversity in V(D)J recombination. Nature 363:625–627

    Article  PubMed  CAS  Google Scholar 

  • Getts R, Stamato T (1994) Absence of a Ku-like DNA end binding activity in the xrs double-strand DNA repair-deficient mutant. J Biol Chem 269:15981–15984

    PubMed  CAS  Google Scholar 

  • Gilfillan S, Dierieh A, Lemeur M, Benoist C, Mathis D (1993) Mice lacking TdT: mature animals with an immature lymphocyte repertoire. Science 261:1175–1178

    Article  PubMed  CAS  Google Scholar 

  • Gottlieb X Jackson S (1993) The DNA-dependent protein kinase: requirement for DNA ends and association with Ku antigen. Cell 72:131–142

    Article  PubMed  CAS  Google Scholar 

  • Hafezparast M, Kaur G, Zdzienieka M, Athwal R, Lehmann A, Jeggo P (1993) Subehromosomal localization of a gene (XRCC5) involved in double-strand break repair to the region 2q34–36. Somat Cell Mol Genet 19:413–421

    Article  PubMed  CAS  Google Scholar 

  • Harrington JJ, Lieber MR (1994) The characterization of a mammalian DNA structure-specific en- donuclease. EMBO J 13:1235–1246

    PubMed  CAS  Google Scholar 

  • Harrington JJ, Lieber MR (1995) DNA structural elennents required for FEN-1 binding. J Biol Chem 270:4503–4508

    Article  PubMed  CAS  Google Scholar 

  • Hendrickson E, Qin XQ, Bunnp E, Schatz D, Oettinger M, Weaver D (1991) A link between double- strand break related repair and V(D)J recombination: the Scid mutation. Proc Natl Acad Sci USA 88:4061–4065

    Article  PubMed  CAS  Google Scholar 

  • Jacoby D, Wensink P (1994) Yolk protein factor 1 is a Drosophi/a homolog of Ku, the DNA-binding subunit of a DNA-dependent protein kinase from humans. J Biol Chem 269:11484–11491

    PubMed  CAS  Google Scholar 

  • Jeggo AP (1990) Studies on mammalian mutants defective in rejoining double-strand breaks in DNA. Mutat Res 239:1–16

    PubMed  CAS  Google Scholar 

  • Kirschgessner C, Patil C, Evans J, Cuomo C, Fried L, Carter I Oettinger M, Brown JM (1995) DNA-dependent kinase (p350) as a candidate gene for the murine SCID defect. Science 267:1178–1185

    Article  Google Scholar 

  • Komori X, Okada A, Stewart V, Alt F (1993) Lack of N regions in antigen receptor variable region genes of TdT-deficient lymphocytes. Science 261:1171–1175

    Article  PubMed  CAS  Google Scholar 

  • Lafaille J, DeCloux A, Bonneville M, Takagaki Y Tonegawa S (1989) Junctional sequences of T cell receptor yS genes: implications for T cell lineages and for a novel intermediate of V-(D)-J joining. Cell 59:859–870

    Article  PubMed  CAS  Google Scholar 

  • Lee SE, Pulaski C, He DM, Benjamin DM, Voss JM, Um JY Hendrickson E (1995) Isolation of mammalian mutants that are X-ray sensitive, impaired in DNA double-strand break repair and defective for V(D)J recombination. Mutation Res 336:279–291

    PubMed  CAS  Google Scholar 

  • Lewis S (1994a) The mechanism of V(D)J joining: lessons from molecular, immunological, and comparative analyses. Adv Immunol 56:27–150

    Article  PubMed  CAS  Google Scholar 

  • Lewis SM (1994b) P nucleotide insertions, and the resolution of hairpin DNA structures in mammalian cells. Proc Natl Acad Sci USA 91:1332–1336

    Article  PubMed  CAS  Google Scholar 

  • Li Z, Otevrel T, Gao Y, Cheng HL, Seed B, Stamato TD, Taccioli GE, Alt FW (1995) The XRCC4 gene encodes a novel protein involved in DNA double-strand break repair and V(D)J recombination. Cell 83:1079–1089

    Article  PubMed  CAS  Google Scholar 

  • Lieber MR (1991) Site-specific recombination in the immune system. FASEB J 5:2934–2944

    PubMed  CAS  Google Scholar 

  • Lieber MR, Hesse JE, Lewis S, Bosma GC, Rosenberg N, Mizuuchi K, Bosma MJ, Geliert M (1988) The defect in murine severe combined immune deficiency: joining of signal sequences but not coding segments in V(D)J recombination. Cell 55:7–16

    Article  PubMed  CAS  Google Scholar 

  • McBlane R van Gent D, Ramsden D, Romeo C, Cuomo C, Geliert M, Oettinger M (1995) Cleavage at a V(D)J recombination signal requires only RAG1 and RAG2 proteins and occurs in two steps. Cell (in press)

    Google Scholar 

  • McCormack W, Tjoelker L, Carlson L, Petryniak B, Barth C, Humphries E, Thompson C (1989) Chicken IgL gene rearrangement involves deletion of a circular episome and addition of single nonrandom nucleotides to both coding segments. Cell 56:785–791

    Article  PubMed  CAS  Google Scholar 

  • Mimori T Hardin JA (1986) Mechanism of interaction between Ku protein and DNA. J Biol Chem 261:10375–10379

    PubMed  CAS  Google Scholar 

  • Mimori T Hardin JA, Steitz JA (1986) Characterization of the DNA-binding protein antigen Kü recognized by autoantibodies from patients with rheumatic disorders. J Biol Chem 261:2274–2278

    PubMed  CAS  Google Scholar 

  • Mimori X Akizuki M, Yamagata H, Inada S, Yoshida S, Homma M (1981) Characterization of a high molecular weight acidic nuclear protein recognised by antibodies in sera from patients with polymyositis-scleroderma overlap. J Clin Invest 68:611–620

    Article  PubMed  CAS  Google Scholar 

  • Mimori T, Ohosone Y Hama N, Akizuki M, Homma M, Griffith AJ, Hardin JA (1990) Isolation and characterization of cDNA encoding the 80-kDa subunit protein of the human autoantigen Ku (p70/p80) recognized by autoantibodies from patients with scleroderma-polymyositis overlap syndrome. Proc Natl Acad Sci USA 87:1777–1781

    Article  PubMed  CAS  Google Scholar 

  • Oettinger M, Schatz D, Gorka C, Baltimore D (1990) RAG-1 and RAG-2, adjacent genes that synergistieally activate V(D)J recombination. Science 248:1517–1523

    Article  PubMed  CAS  Google Scholar 

  • Paillard S, Strauss F (1991) Analysis of the mechanism of interaction of simian Ku protein with DNA. NucI Acids Res 19:5619–5624

    Article  CAS  Google Scholar 

  • Paillard S, Strauss F (1993) Site-specific proteolytic cleavage of Ku protein bound to DNA. Proteins 15:330–337

    Article  PubMed  CAS  Google Scholar 

  • Pergola R, Zdzienicka MZ, Lieber MR (1993) V(D)J recombination in mammalian cell mutants defective in DNA double-strand break repair. Mol Cell Biol 13:3464–3471

    PubMed  CAS  Google Scholar 

  • Rathmell WK, Chu G (1994a) A DNA end-binding factor involved in double-strand break repair and V(D)J recombination. Mol Cell Biol 14:4741–4748

    PubMed  CAS  Google Scholar 

  • Rathmell WK, Chu G (1994b) Involvement of the Ku autoantigen in the cellular response to DNA double-strand breaks. Proc Natl Acad Sci USA 91:7623–7627

    Article  PubMed  CAS  Google Scholar 

  • Reeves W (1992) Antibodies to the p70/p80 (Ku) antigens in systennic lupus erythematosus. Rheunn Dis Clin N Am 18:391–415

    CAS  Google Scholar 

  • Reeves WH, Sthoeger ZM (1989) Molecular cloning of cDNA encoding the p70 (Ku) lupus autoantigen. J Biol Chem 264:5047–5052

    PubMed  CAS  Google Scholar 

  • Roth DB, Wilson JH (1986) Nonhomologous recombination in mammalian cells: role for short sequence homologies in the joining reaction. Mol Cell Biol 6:4295–4304

    PubMed  CAS  Google Scholar 

  • Roth DB, Porter TN, Wilson JH (1985) Mechanisms of nonhomologous recombination in mammalian cells. Mol Cell Biol 5:2599–2607

    PubMed  CAS  Google Scholar 

  • Roth DB, Chang X, Wilson JH (1989) Comparison of filler DNA at immune, nonimmune, and oncogenic rearrangements suggests multiple mechanisms of formation. Mol Cell Biol 9:3049–3057

    PubMed  CAS  Google Scholar 

  • Roth D, Menetski J, Nakajima R, Bosma M, Geliert M (1992) V(D)J recombination: broken DNA molecules with covalently sealed (hairpin) coding ends in Scid mouse thymocytes. Cell 70:983–991

    Article  PubMed  CAS  Google Scholar 

  • Schatz DG, Oettinger MA, Baltimore D (1989) The V(D)J recombination activating gene, RAG-1. Cell 59:1035–1048

    Article  PubMed  CAS  Google Scholar 

  • Smider V Rathmell WK, Lieber M, Chu G (1994) Restoration of X-ray resistance and V(D)J recombination in mutant cells by Ku cDNA. Science 266:288–291

    Article  PubMed  CAS  Google Scholar 

  • Taccioli G, Rathbun G, Oltz E, Stamato T, Jeggo R, Alt F (1993) Impairment of V(D)J recombination in double-strand break repair mutants. Science 260:207–210

    Article  PubMed  CAS  Google Scholar 

  • Taccioli G, Gottlieb T, Blunt T, Priestly A, Demengeot J, Mizuta R, Lehmann A, Alt R Jackson S, Jeggo P (1994) Ku80: product of the XRCC5 gene and its role in DNA repair and V(D)J recombination. Science 265:1442–1445

    Article  PubMed  CAS  Google Scholar 

  • Tuteja N, Tuteja R, Ochem A, Taneja R Huang N, Simoncsits A, Susie S, Rahman K, Marusic L, Chen J, Zhang J, Wang S, Pongor S, Falaschi A (1994) Human DNA helicase II: a novel DNA unwinding enzyme identified as the Ku autoantigen. EMBO J 13:4991–5001

    PubMed  CAS  Google Scholar 

  • van Gent D, McBlane JR Ramsden D, Sadofsky M, Hesse J, Geliert M (1995) Initiation of V(D)J recombination in a cell-free system. Cell 81:925–934

    Article  PubMed  Google Scholar 

  • Yaneva M, Wen J, Ayala A, Cook R (1989) cDNA-derived amino acid sequence of the 86-kDa subunit of the Ku antigen. J Biol Chem 264:13407–13411

    PubMed  CAS  Google Scholar 

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© 1996 Springer-Verlag Berlin Heidelberg

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Chu, G. (1996). Role of the Ku Autoantigen in V(D)J Recombination and Double-Strand Break Repair. In: Jessberger, R., Lieber, M.R. (eds) Molecular Analysis of DNA Rearrangements in the Immune System. Current Topics in Microbiology and Immunology, vol 217. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-50140-1_8

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  • DOI: https://doi.org/10.1007/978-3-642-50140-1_8

  • Publisher Name: Springer, Berlin, Heidelberg

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