Skip to main content

The Computation of Long Time Hamiltonian Trajectories for Molecular Systems via Global Geodesics

  • Conference paper
  • First Online:
Numerical Mathematics and Advanced Applications 2011
  • 1993 Accesses

Abstract

A string method for the computation of Hamiltonian trajectories linking two given points is presented, based on the Maupertuis principle; trajectories then correspond to geodesics. For local geodesics, convergence of an algorithm based on Birkhoff’s method has been shown recently in Schwetlick and Zimmer (Submitted). We demonstrate how to extend this approach to global geodesics and thus arbitrary boundary values of the corresponding Hamiltonian problem. Numerical illustrations of the algorithm are given, as well as situations are shown in which the method converges to a degenerate solution.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 169.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. S. Blanes and C. J. Budd. Adaptive geometric integrators for Hamiltonian problems with approximate scale invariance. SIAM J. Sci. Comput., 26(4):1089–1113 (electronic), 2005.

    Google Scholar 

  2. William B. Gordon. The existence of geodesics joining two given points. J. Differential Geometry, 9:443–450, 1974.

    Google Scholar 

  3. Ernst Hairer, Christian Lubich, and Gerhard Wanner. Geometric numerical integration, volume 31 of Springer Series in Computational Mathematics. Springer-Verlag, Berlin, 2002. Structure-preserving algorithms for ordinary differential equations.

    Google Scholar 

  4. JĂĽrgen Jost. Riemannian geometry and geometric analysis. Universitext. Springer-Verlag, Berlin, third edition, 2002.

    Google Scholar 

  5. A. Lew, J. E. Marsden, M. Ortiz, and M. West. Variational time integrators. Internat. J. Numer. Methods Engrg., 60(1):153–212, 2004.

    Article  MathSciNet  MATH  Google Scholar 

  6. J. E. Marsden and M. West. Discrete mechanics and variational integrators. Acta Numer., 10:357–514, 2001.

    Article  MathSciNet  MATH  Google Scholar 

  7. Klaus Müller. Reaction paths on multidimensional energy hypersurfaces. Angew. Chem. Int. Edit., 19(1):1–13, 1980.

    Google Scholar 

  8. Sujit Nair. Time adaptive variational integrators: A space-time geodesic approach. Physica D: Nonlinear Phenomena, 241(4):315–325, 2012.

    Article  MathSciNet  MATH  Google Scholar 

  9. Roberto Olender and Ron Elber. Calculation of classical trajectories with a very large time step: Formalism and numerical examples. J. Chem. Phys., 105(20):9299–9315, 1996.

    Google Scholar 

  10. Daniele Passerone and Michele Parrinello. Action-derived molecular dynamics in the study of rare events. Phys. Rev. Lett., 87(10):108302, Aug 2001.

    Google Scholar 

  11. Hartmut Schwetlick and Johannes Zimmer. A convergent string method: Existence and approximation for the Hamiltonian boundary-value problem. Submitted.

    Google Scholar 

  12. Hartmut Schwetlick and Johannes Zimmer. Calculation of long time classical trajectories: Algorithmic treatment and applications for molecular systems. J. Chem. Phys., 130(12):124106, 2009.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to H. Schwetlick .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2013 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Schwetlick, H., Zimmer, J. (2013). The Computation of Long Time Hamiltonian Trajectories for Molecular Systems via Global Geodesics. In: Cangiani, A., Davidchack, R., Georgoulis, E., Gorban, A., Levesley, J., Tretyakov, M. (eds) Numerical Mathematics and Advanced Applications 2011. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-33134-3_25

Download citation

Publish with us

Policies and ethics