Abstract
Nanomaterials have been extensively studied in a variety of fields ranging from energy conversion to clinical diagnosis. In this chapter, we focus our discussion on aptamer-functionalized nanomaterials. Nucleic acid aptamers are an emerging class of synthetic affinity molecules with numerous merits such as high binding specificity, high binding affinity, small sizes, and stable structures. Therefore, the integration of aptamers and nanomaterials holds great potential for the development of novel nanotechnology platforms for applications of various fields such as molecular detection, cell imaging and isolation, drug delivery, and integrated imaging and therapy.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Alivisatos AP (1996) Semiconductor clusters, nanocrystals, and quantum dots. Science 271(5251):933–937
Lu AH et al (2007) Magnetic nanoparticles: Synthesis, protection, functionalization, and application. Angew Chem Int Ed 46(8):1222–1244
Xia YN et al (2003) One-dimensional nanostructures: synthesis, characterization, and applications. Adv Mater 15(5):353–389
Hillaireau H, Couvreur P (2009) Nanocarriers’ entry into the cell: relevance to drug delivery. Cell Mol Life Sci 66(17):2873–2896
Dobrovolskaia MA, McNeil SE (2007) Immunological properties of engineered nanomaterials. Nat Nanotechnol 2(8):469–478
Medintz IL et al (2005) Quantum dot bioconjugates for imaging, labelling and sensing. Nat Mater 4(6):435–446
Chan WCW, Nie SM (1998) Quantum dot bioconjugates for ultrasensitive nonisotopic detection. Science 281(5385):2016–2018
Reddy LH et al (2012) Magnetic nanoparticles: design and characterization, toxicity and biocompatibility, pharmaceutical and biomedical applications. Chem Rev 112(11):5818–5878
Pouliquen D et al (1991) Iron-oxide nanoparticles for use as an MRI contrast agent – pharmacokinetics and metabolism. Magn Reson Imaging 9(3):275–283
Boisselier E, Astruc D (2009) Gold nanoparticles in nanomedicine: preparations, imaging, diagnostics, therapies and toxicity. Chem Soc Rev 38(6):1759–1782
Ellington AD, Szostak JW (1990) Invitro selection of RNA molecules that bind specific ligands. Nature 346(6287):818–822
Ellington AD, Szostak JW (1992) Selection in vitro of single-stranded-DNA molecules that fold into specific ligand-binding structures. Nature 355(6363):850–852
Daniels DA et al (2003) A tenascin-C aptamer identified by tumor cell SELEX: systematic evolution of ligands by exponential enrichment. Proc Natl Acad Sci USA 100(26):15416–15421
Wilson DS, Szostak JW (1999) In vitro selection of functional nucleic acids. Annu Rev Biochem 68:611–647
Lou X et al (2009) Micromagnetic selection of aptamers in microfluidic channels. Proc Natl Acad Sci USA 106(9):2989–2994
Stoltenburg R et al (2007) SELEX-a (r)evolutionary method to generate high-affinity nucleic acid ligands. Biomol Eng 24(4):381–403
Bock LC et al (1992) Selection of single-stranded-DNA molecules that bind and inhibit human thrombin. Nature 355(6360):564–566
Tuerk C, Gold L (1990) Systematic evolution of ligands by exponential enrichment – RNA ligands to bacteriophage-T4 DNA-polymerase. Science 249(4968):505–510
Morris KN et al (1998) High affinity ligands from in vitro selection: complex targets. Proc Natl Acad Sci USA 95(6):2902–2907
Jayasena SD (1999) Aptamers: an emerging class of molecules that rival antibodies in diagnostics. Clin Chem 45(9):1628–1650
Chames P et al (2009) Therapeutic antibodies: successes, limitations and hopes for the future. Br J Pharmacol 157(2):220–233
Evan GI et al (1985) Isolation of monoclonal-antibodies specific for human c-myc proto-oncogene product. Mol Cell Biol 5(12):3610–3616
Iliuk AB et al (2011) Aptamer in bioanalytical applications. Anal Chem 83(12):4440–4452
Song SP et al (2008) Aptamer-based biosensors. Trends Analyt Chem 27(2):108–117
McNay G et al (2011) Surface-Enhanced Raman Scattering (SERS) and Surface-Enhanced Resonance Raman Scattering (SERRS): a review of applications. Appl Spectrosc 65(8):825–837
Nie SM, Emery SR (1997) Probing single molecules and single nanoparticles by surface-enhanced Raman scattering. Science 275(5303):1102–1106
Wang Y et al (2007) SERS opens a new way in aptasensor for protein recognition with high sensitivity and selectivity. Chem Commun (48):5220–5222
Tasset DM et al (1997) Oligonucleotide inhibitors of human thrombin that bind distinct epitopes. J Mol Biol 272(5):688–698
Padmanabhan K et al (1993) The strucure of alpha-thrombin inhibited by a 15-mer single-stranded-DNA aptamer. Journal of Biological Chemistry 268(24): 17651–17654
Kim NH et al (2010) Aptamer-mediated surface-enhanced Raman spectroscopy intensity amplification. Nano Lett 10(10):4181–4185
Choi JH et al (2006) Aptamer-capped nanocrystal quantum dots: a new method for label-free protein detection. J Am Chem Soc 128(49):15584–15585
Jares-Erijman EA, Jovin TM (2003) FRET imaging. Nat Biotechnol 21(11):1387–1395
Ha T et al (1996) Probing the interaction between two single molecules: Fluorescence resonance energy transfer between a single donor and a single acceptor. Proc Nat Acad Sci USA 93(13):6264–6268
Clapp AR et al (2004) Fluorescence resonance energy transfer between quantum dot donors and dye-labeled protein acceptors. J Am Chem Soc 126(1):301–310
Levy M et al (2005) Quantum-dot aptamer beacons for the detection of proteins. Chembiochem 6(12):2163–2166
Morales-Narvaez E et al (2012) Simple forster resonance energy transfer evidence for the ultrahigh quantum dot quenching efficiency by graphene oxide compared to other carbon structures. Carbon 50(8):2987–2993
Chang H et al (2010) Graphene fluorescence resonance energy transfer aptasensor for the thrombin detection. Anal Chem 82(6):2341–2346
Dong H et al (2010) Fluorescence resonance energy transfer between quantum dots and graphene oxide for sensing biomolecules. Anal Chem 82(13):5511–5517
Freeman R et al (2009) Self-assembly of supramolecular aptamer structures for optical or electrochemical sensing. Analyst 134(4):653–656
Ghosh SK, Pal T (2007) Interparticle coupling effect on the surface Plasmon resonance of gold nanoparticles: from theory to applications. Chem Rev 107(11):4797–4862
Liu J, Lu Y (2006) Preparation of aptamer-linked gold nanoparticle purple aggregates for colorimetric sensing of analytes. Nat Protoc 1(1):246–252
Huang CC et al (2005) Aptamer-modified gold nanoparticles for colorimetric determination of platelet-derived growth factors and their receptors. Anal Chem 77(17):5735–5741
Rosi NL, Mirkin CA (2005) Nanostructures in biodiagnostics. Chem Rev 105(4):1547–1562
Zhang J et al (2008) Visual cocaine detection with gold nanoparticles and rationally engineered aptamer structures. Small 4(8):1196–1200
Wang L et al (2006) Unmodified gold nanoparticles as a colorimetric probe for potassium DNA aptamers. Chem Commun (36):3780–3782
Li HX, Rothberg L (2004) Colorimetric detection of DNA sequences based on electrostatic interactions with unmodified gold nanoparticles. Proc Natl Acad Sci USA 101(39):14036–14039
Xia F et al (2010) Colorimetric detection of DNA, small molecules, proteins, and ions using unmodified gold nanoparticles and conjugated polyelectrolytes. Proc Natl Acad Sci USA 107(24):10837–10841
Zayats M et al (2006) Label-free and reagentless aptamer-based sensors for small molecules. J Am Chem Soc 128(42):13666–13667
So HM et al (2005) Single-walled carbon nanotube biosensors using aptamers as molecular recognition elements. J Am Chem Soc 127(34):11906–11907
Maehashi K et al (2009) Aptamer-based label-free immunosensors using carbon nanotube field-effect transistors. Electroanalysis 21(11):1285–1290
Golub E et al (2009) Electrochemical, photoelectrochemical, and surface Plasmon resonance detection of cocaine using supramolecular aptamer complexes and metallic or semiconductor nanoparticles. Anal Chem 81(22):9291–9298
Hansen JA et al (2006) Quantum-dot/aptamer-based ultrasensitive multi-analyte electrochemical biosensor. J Am Chem Soc 128(7):2228–2229
Zhou L et al (2007) Aptamer-based rolling circle amplification: a platform for electrochemical detection of protein. Anal Chem 79(19):7492–7500
Shangguan D et al (2006) Aptamers evolved from live cells as effective molecular probes for cancer study. Proc Natl Acad Sci USA 103(32):11838–11843
Huang YF et al (2008) Cancer cell targeting using multiple aptamers conjugated on nanorods. Anal Chem 80(3):567–572
Wang CH et al (2011) Aptamer-conjugated nanobubbles for targeted ultrasound molecular imaging. Langmuir 27(11):6971–6976
Lupold SE et al (2002) Identification and characterization of nuclease-stabilized RNA molecules that bind human prostate cancer cells via the prostate-specific membrane antigen. Cancer Res 62(14):4029–4033
Chu TC et al (2006) Labeling tumor cells with fluorescent nanocrystal-aptamer bioconjugates. Biosens Bioelectron 21(10):1859–1866
Hwang do W et al (2010) A nucleolin-targeted multimodal nanoparticle imaging probe for tracking cancer cells using an aptamer. J Nucl Med 51(1):98–105
Bates PJ et al (1999) Antiproliferative activity of G-rich oligonucleotides correlates with protein binding. J Biol Chem 274(37):26369–26377
Herr JK et al (2006) Aptamer-conjugated nanoparticles for selective collection and detection of cancer cells. Anal Chem 78(9):2918–2924
Medley CD et al (2011) Aptamer-conjugated nanoparticles for cancer cell detection. Anal Chem 83(3):727–734
Smith JE et al (2007) Aptamer-conjugated nanoparticles for the collection and detection of multiple cancer cells. Anal Chem 79(8):3075–3082
Medley CD et al (2008) Gold nanoparticle-based colorimetric assay for the direct detection of cancerous cells. Anal Chem 80(4):1067–1072
Liu GD et al (2009) Aptamer-nanoparticle strip biosensor for sensitive detection of cancer cells. Anal Chem 81(24):10013–10018
Zheng D et al (2009) Aptamer Nano-flares for Molecular Detection in Living Cells. Nano Lett 9(9): 3258–3261
Wang Y et al (2010) Aptamer/graphene oxide nanocomplex for in situ molecular probing in living cells. J Am Chem Soc 132(27):9274–9276
Nielsen LJ et al (2010) Aptamers embedded in polyacrylamide nanoparticles: a tool for in vivo metabolite sensing. Acs Nano 4(8):4361–4370
Allen TM, Cullis PR (2004) Drug delivery systems: entering the mainstream. Science 303(5665):1818–1822
Cho KJ et al (2008) Therapeutic nanoparticles for drug delivery in cancer. Clin Cancer Res 14(5):1310–1316
Gref R et al (1994) Biodegradable long-circulating polymeric nanospheres. Science 263(5153):1600–1603
Farokhzad OC et al (2004) Nanopartide-aptamer bioconjugates: a new approach for targeting prostate cancer cells. Cancer Res 64(21):7668–7672
Farokhzad OC et al (2006) Targeted nanoparticle-aptamer bioconjugates for cancer chemotherapy in vivo. Proc Natl Acad Sci USA 103(16):6315–6320
Gu F et al (2008) Precise engineering of targeted nanoparticles by using self-assembled biointegrated block copolymers. Proc Natl Acad Sci USA 105(7):2586–2591
Kang HZ et al (2010) A liposome-based nanostructure for aptamer directed delivery. Chem Commun 46(2):249–251
Wu Y et al (2010) DNA aptamer-micelle as an efficient detection/delivery vehicle toward cancer cells. Proc Natl Acad Sci USA 107(1):5–10
Luo YL et al (2011) Release of photoactivatable drugs from plasmonic nanoparticles for targeted cancer therapy. Acs Nano 5(10):7796–7804
Kang HZ et al (2011) Near-infrared light-responsive core-shell nanogels for targeted drug delivery. Acs Nano 5(6):5094–5099
Yang XJ et al (2012) Near-infrared light-triggered, targeted drug delivery to cancer cells by aptamer gated nanovehicles. Adv Mater 24(21):2890–2895
Bagalkot V et al (2007) Quantum dot - aptamer conjugates for synchronous cancer imaging, therapy, and sensing of drug delivery based on bi-fluorescence resonance energy transfer. Nano Lett 7(10):3065–3070
Soontornworajit B, Wang Y (2011) Nucleic acid aptamers for clinical diagnosis: cell detection and molecular imaging. Anal Bioanal Chem 399(4):1591–1599
Wang AZ et al (2008) Superparamagnetic iron oxide nanoparticle-aptamer bioconjugates for combined prostate cancer imaging and therapy. ChemMedChem 3(9):1311–1315
Kim D et al (2010) A drug-loaded aptamer-gold nanoparticle bioconjugate for combined CT imaging and therapy of prostate cancer. Acs Nano 4(7):3689–3696
Fan Z et al (2012) Multifunctional plasmonic shell-magnetic core nanoparticles for targeted diagnostics, isolation, and photothermal destruction of tumor cells. Acs Nano 6(2):1065–1073
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2014 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Huang, Y., Wang, Y. (2014). Aptamer-Functionalized Nanomaterials for Biological and Biomedical Applications. In: Bhushan, B., Luo, D., Schricker, S., Sigmund, W., Zauscher, S. (eds) Handbook of Nanomaterials Properties. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-31107-9_51
Download citation
DOI: https://doi.org/10.1007/978-3-642-31107-9_51
Published:
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-31106-2
Online ISBN: 978-3-642-31107-9
eBook Packages: Chemistry and Materials ScienceChemistry and Material Science (R0)