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Linear Time Inference of Strings from Cover Arrays Using a Binary Alphabet

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WALCOM: Algorithms and Computation (WALCOM 2012)

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Abstract

Covers being one of the most popular form of regularities in strings, have drawn much attention over time. In this paper, we focus on the problem of linear time inference of strings from cover arrays using the least sized alphabet possible. We present an algorithm that can reconstruct a string x over a two-letter alphabet whenever a valid cover array C is given as an input. This algorithm uses several interesting combinatorial properties of cover arrays and an interesting relation between border array and cover array to achieve this. Our algorithm runs in linear time.

The authors’ names are in the alphabetical order of their last names. This research was part of the undergraduate research work of Nazeen and Reaz under the supervision of Rahman.

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Moosa, T.M., Nazeen, S., Rahman, M.S., Reaz, R. (2012). Linear Time Inference of Strings from Cover Arrays Using a Binary Alphabet. In: Rahman, M.S., Nakano, Si. (eds) WALCOM: Algorithms and Computation. WALCOM 2012. Lecture Notes in Computer Science, vol 7157. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-28076-4_17

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  • DOI: https://doi.org/10.1007/978-3-642-28076-4_17

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-28075-7

  • Online ISBN: 978-3-642-28076-4

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