Skip to main content

T 1 Mapping, AIF and Pharmacokinetic Parameter Extraction from Dynamic Contrast Enhancement MRI Data

  • Conference paper

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 7012))

Abstract

Dynamic contrast enhanced (DCE) magnetic resonance imaging (MRI) is a sensitive, noninvasive technique for the assessment of microvascular properties of the tissue. Quantitative physiological parameters can be obtained using pharmacokinetic (PK) models that track contrast agents as it passes through the tissue vasculature. Such analysis usually requires prior knowledge of the voxels’ T 1 values and of the Arterial Input Function (AIF). Therefore, relaxometry T 1 measurements are usually performed prior to contrast-agent injection and the AIF is manually or automatically extracted from the dynamic data. In this study, a method for a fully automatic analysis of DCE data for joint PK parameters, T 1 mapping and AIF extraction is proposed. Results are shown on simulated data compared to other methods and on data acquired from healthy subjects and patients with Glioblastoma who received anti-angiogenic therapy. The proposed method renders DCE analysis to be robust and easily applicable.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   54.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   69.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. O’Connor, J.P.B., Jackson, A., Parker, G.J.M., Jayson, G.C.: DCE-MRI biomarkers in the clinical evaluation of antiangiogenic and vascular disrupting agents. Brit. J. Can. 96, 189–195 (2007)

    Article  Google Scholar 

  2. Murase, K.: Efficient method for calculating kinetic parameters using T1-weighted dynamic contrast-enhanced magnetic resonance imaging. Mag. Res. Med. 51, 858–862 (2004)

    Article  Google Scholar 

  3. Fletcher, R.: A modified Marquardt subroutine for nonlinear least squares. Atom. Res. Est. AERE-R6799 (1971)

    Google Scholar 

  4. Cardoso, M.F., Salcedo, R., Feyo de Azevedo, S.: The simplex-simulated annealing approach to continuous non-linear optimization. Comp. Chem. Eng. 20, 1065–1080 (1996)

    Article  Google Scholar 

  5. Fluckiger, J.U., Schabel, M.C., DiBella, E.V.R.: Model-based blind estimation of kinetic parameters in dynamic contrast enhanced (DCE)-MRI. Mag. Res. Med. 62, 1477–1486 (2009)

    Article  Google Scholar 

  6. Bouman, C. A., Shapiro, M., Cook, G. W., Atkins, C. B., Cheng, H.: Cluster: An unsupervised algorithm for modeling gaussian mixtures, https://engineering.purdue.edu/~bouman/

  7. Parker, G.J., Roberts, C., Macdonald, A., Buonaccorsi, G.A., Cheung, S., Buckley, D.L., Jackson, A., Watson, Y., Davies, K., Jayson, G.C.: Experimentally-derived functional form for a population-averaged high-temporal-resolution arterial input function for dynamic contrast-enhanced MRI. Mag. Res. Med. 56, 993–1000 (2006)

    Article  Google Scholar 

  8. Deoni, S.C., Rutt, B.K., Peters, T.M.: Rapid combined T1 and T2 mapping using gradient recalled acquisition in the steady state. Mag. Res. Med. 49, 515–526 (2003)

    Article  Google Scholar 

  9. Tofts, P.S., Kermode, A.G.: Measurement of the blood-brain barrier permeability and leakage space using dynamic MR imaging. 1. Fundamental concepts. Mag. Res. Med. 17, 357–367 (1991)

    Google Scholar 

  10. Tofts, P.S., Brix, G., Buckley, D.L., Evelhoch, J.L., Henderson, E., Knopp, M.V., Larsson, H.B., Lee, T.-Y., Mayr, N.A., Parker, G.J., Port, R.E., Taylor, J., Weisskoff, R.M.: Estimating kinetic parameters from dynamic contrast-enhanced t1-weighted MRI of a diffusable tracer: Standardized quantities and symbols. J. Mag. Res. Imag. 10, 223–232 (1999)

    Article  Google Scholar 

  11. Ashburner, J., Friston, K.J.: Unied segmentation. NeuroImage 26, 839–851 (2005)

    Article  Google Scholar 

  12. Yang, C., Karczmar, G.S., Medved, M., Stadler, W.M.: Multiple reference tissue method for contrast agent arterial input function estimation. Mag. Res. Med. 58, 1266–1275 (2007)

    Article  Google Scholar 

  13. Srikanchana, R., Thomasson, D., Choyke, P., Dwyer, A.: A Comparison of Pharmacokinetic Models of Dynamic Contrast Enhanced MRI. In: 17th IEEE Symposium on Computer-Based Medical Systems, p. 361. IEEE Computer Society, Los Alamitos (2004)

    Chapter  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2011 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Liberman, G., Louzoun, Y., Colliot, O., Ben Bashat, D. (2011). T 1 Mapping, AIF and Pharmacokinetic Parameter Extraction from Dynamic Contrast Enhancement MRI Data. In: Liu, T., Shen, D., Ibanez, L., Tao, X. (eds) Multimodal Brain Image Analysis. MBIA 2011. Lecture Notes in Computer Science, vol 7012. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-24446-9_10

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-24446-9_10

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-24445-2

  • Online ISBN: 978-3-642-24446-9

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics