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A Multi-Layer ‘Gas of Circles’ Markov Random Field Model for the Extraction of Overlapping Near-Circular Objects

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Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 6915))

Abstract

We propose a multi-layer binary Markov random field (MRF) model that assigns high probability to object configurations in the image domain consisting of an unknown number of possibly touching or overlapping near-circular objects of approximately a given size. Each layer has an associated binary field that specifies a region corresponding to objects. Overlapping objects are represented by regions in different layers. Within each layer, long-range interactions favor connected components of approximately circular shape, while regions in different layers that overlap are penalized. Used as a prior coupled with a suitable data likelihood, the model can be used for object extraction from images, e.g. cells in biological images or densely-packed tree crowns in remote sensing images. We present a theoretical and experimental analysis of the model, and demonstrate its performance on various synthetic and biomedical images.

This research was partially supported by the grant CNK80370 of the National Office for Research and Technology (NKTH) & Hungarian Scientific Research Fund (OTKA); by the European Union and co-financed by the European Regional Development Fund within the project TAMOP-4.2.1/B-09/1/KONV-2010-0005.

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References

  1. Blaskovics, T., Kato, Z., Jermyn, I.: A Markov random field model for extracting near-circular shapes. In: IEEE Proceedings of International Conference on Image Processing, pp. 1073–1076. IEEE, Cairo (2009)

    Google Scholar 

  2. Caselles, V., Kimmel, R., Sapiro, G.: Geodesic active contours. International Journal of Computer Vision 22(1), 61–79 (1997)

    Article  MATH  Google Scholar 

  3. Cohen, L.: On active contour models and balloons. Computer Vision, Graphics and Image Processing: Image Understanding 53, 211–218 (1991)

    MATH  Google Scholar 

  4. Cremers, D., Tischhauser, F., Weickert, J., Schnorr, C.: Diffusion snakes: Introducing statistical shape knowledge into the Mumford-Shah functional. International Journal of Computer Vision 50(3), 295–313 (2002)

    Article  MATH  Google Scholar 

  5. Flach, B., Schlesinger, D.: Combining shape priors and MRF-segmentation. In: da Vitoria Lobo, N., Kasparis, T., Roli, F., Kwok, J.T., Georgiopoulos, M., Anagnostopoulos, G.C., Loog, M. (eds.) S+SSPR 2008. LNCS, vol. 5342, pp. 177–186. Springer, Heidelberg (2008)

    Chapter  Google Scholar 

  6. Geman, S., Geman, D.: Stochastic relaxation, Gibbs distributions and the Bayesian restoration of images. IEEE Transactions on Pattern Analysis and Machine Intelligence 6, 721–741 (1984)

    Article  MATH  Google Scholar 

  7. Horvath, P., Jermyn, I.H.: A ‘gas of circles’ phase field model and its application to tree crown extraction. In: Proceedings of European Signal Processing Conference (EUSIPCO), Poznan, Poland (September 2007)

    Google Scholar 

  8. Horvath, P., Jermyn, I., Kato, Z., Zerubia, J.: A higher-order active contour model of a ‘gas of circles’ and its application to tree crown extraction. Pattern Recognition 42(5), 699–709 (2009)

    Article  MATH  Google Scholar 

  9. Kass, M., Witkin, A., Terzopoulos, D.: Snakes: Active contour models. International Journal of Computer Vision 1(4), 321–331 (1988)

    Article  MATH  Google Scholar 

  10. Kato, Z., Berthod, M., Zerubia, J.: A hierarchical Markov random field model and multi-temperature annealing for parallel image classification. Computer Vision, Graphics and Image Processing: Graphical Models and Image Processing 58(1), 18–37 (1996)

    Google Scholar 

  11. Rochery, M., Jermyn, I.H., Zerubia, J.: Higher order active contours. International Journal of Computer Vision 69(1), 27–42 (2006), http://dx.doi.org/10.1007/s11263-006-6851-y

    Article  Google Scholar 

  12. Rochery, M., Jermyn, I.H., Zerubia, J.: Phase field models and higher-order active contours. In: Proc. IEEE International Conference on Computer Vision (ICCV), Beijing, China (October 2005)

    Google Scholar 

  13. Rousson, M., Paragios, N.: Shape priors for level set representations. In: Heyden, A., Sparr, G., Nielsen, M., Johansen, P. (eds.) ECCV 2002. LNCS, vol. 2351, pp. 78–92. Springer, Heidelberg (2002)

    Chapter  Google Scholar 

  14. Russell, C., Metaxas, D., Restif, C., Torr, P.: Using the \(\textsl{P}^n\) Potts model with learning methods to segment live cell images. In: IEEE 11th International Conference on Computer Vision, pp. 1–8. IEEE, Los Alamitos (2007)

    Google Scholar 

  15. Srivastava, A., Joshi, S., Mio, W., Liu, X.: Statistical shape analysis: Clustering, learning, and testing. IEEE Trans. Pattern Analysis and Machine Intelligence 27(4), 590–602 (2005)

    Article  Google Scholar 

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Nemeth, J., Kato, Z., Jermyn, I. (2011). A Multi-Layer ‘Gas of Circles’ Markov Random Field Model for the Extraction of Overlapping Near-Circular Objects. In: Blanc-Talon, J., Kleihorst, R., Philips, W., Popescu, D., Scheunders, P. (eds) Advanced Concepts for Intelligent Vision Systems. ACIVS 2011. Lecture Notes in Computer Science, vol 6915. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-23687-7_16

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  • DOI: https://doi.org/10.1007/978-3-642-23687-7_16

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-23686-0

  • Online ISBN: 978-3-642-23687-7

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