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Towards Improved Epilepsia Diagnosis by Unsupervised Segmentation of Neuropathology Tissue Sections using Ripley’s-\({\rm{\hat L}}\) Features

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Bildverarbeitung für die Medizin 2011

Part of the book series: Informatik aktuell ((INFORMAT))

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Abstract

The analysis of architectural features in neural tissue sections and the identification of distinct regions is challenging for computer aided diagnosis (CAD) in neuropathology. Due to the difficulty of locating a tissue’s origin and alignment as well as the vast variety of structures within such images an orientation independent (i. e. rotation invariant) approach for tissue region segmentation has to be found to encode the structural features of neural layer architecture in the tissue. We propose to apply the Ripley’s-\(\hat L\) function, originating from the field of plant ecology, to compute feature vectors encoding the spatial statistics of point patterns described by selectively stained cells. Combining the Ripley’s \(\hat L\) features with unsupervised clustering enables a segmentation of tissue sections into neuropathological areas.

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References

  1. Mattfeld T, Eckel S, Fleischer F, et al. Statistical analysis of labelling patterns of mammary carcinoma cell nuclei on histological sections. JMicroscopy. 2009;235:106–18.

    Article  Google Scholar 

  2. Ripley BD. The second-order analysis of stationary point processes. J Appl Prob. 1976;13:255–66.

    Article  MathSciNet  MATH  Google Scholar 

  3. Goreaud F, Pelissier R. On explicit formulas of edge effect correction for Ripley’s K-function. J Veget Sci. 1999;10:433–8.

    Article  Google Scholar 

  4. Wiegand T, Moloney KA. Rings, circles and null-models for point pattern analysis in ecology. Oikos. 2004;104:209–29.

    Article  Google Scholar 

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Correspondence to Timm Schoening .

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© 2011 Springer-Verlag Berlin Heidelberg

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Schoening, T., Hans, V.H., Nattkemper, T.W. (2011). Towards Improved Epilepsia Diagnosis by Unsupervised Segmentation of Neuropathology Tissue Sections using Ripley’s-\({\rm{\hat L}}\) Features. In: Handels, H., Ehrhardt, J., Deserno, T., Meinzer, HP., Tolxdorff, T. (eds) Bildverarbeitung für die Medizin 2011. Informatik aktuell. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-19335-4_11

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