Skip to main content

Imaging as a Surrogate for the Early Prediction and Assessment of Treatment Response through the Analysis of 4-D Texture Ensembles (ISEPARATE)

  • Conference paper

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 6533))

Abstract

In order to facilitate the use of imaging as a surrogate endpoint for the early prediction and assessment of treatment response, we present a quantitative image analysis system to process the anatomical and functional images acquired over the course of treatment. The key features of our system are deformable registration, texture analysis via texton histograms, feature selection using the minimal-redundancy-maximal-relevance method, and classification using support vector machines. The objective of the proposed image analysis and machine learning methods in our system is to permit the identification of multi-parametric imaging phenotypic properties that have superior diagnostic and prognostic value as compared to currently used morphometric measurements. We evaluate our system for predicting treatment response of breast cancer patients undergoing neoadjuvant chemotherapy using a series of MRI acquisitions.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Pathak, S.D., Ng, L., Wyman, B., Fogarasi, S., Racki, S., Oelund, J.C., Sparks, B., Chalana, V.: Quantitative image analysis: software systems in drug development trials. Drug Discovery Today 8(10), 451–458 (2003)

    Article  Google Scholar 

  2. Lorenzon, M., Zuiani, C., Londero, V., Linda, A., Furlan, A., Bazzocchi, M.: Assessment of breast cancer response to neoadjuvant chemotherapy: Is volumetric MRI a reliable tool?. European Journal of Radiology 71(1), 82–88 (2009)

    Article  Google Scholar 

  3. Li, X., Dawant, B.M., Brian Welch, E., Bapsi Chakravarthy, A., Freehardt, D., Mayer, I., Kelley, M., Meszoely, I., Gore, J.C., Yankeelov, T.E.: A nonrigid registration algorithm for longitudinal breast MR images and the analysis of breast tumor response. Magnetic Resonance Imaging 27(9), 1258–1270 (2009)

    Article  Google Scholar 

  4. Zheng, Y., Baloch, S., Englander, S., Schnall, M.D., Shen, D.: Segmentation and Classification of Breast Tumor Using Dynamic Contrast-Enhanced MR Images. In: Ayache, N., Ourselin, S., Maeder, A. (eds.) MICCAI 2007, Part II. LNCS, vol. 4792, pp. 393–401. Springer, Heidelberg (2007)

    Chapter  Google Scholar 

  5. Studholme, C., et al.: An overlap invariant entropy measure of 3D medical image alignment. Pattern recognition 32(1), 71–86 (1999)

    Article  Google Scholar 

  6. Manjunath, B.S., Ma, W.Y.: Texture features for browsing and retrieval of image data. IEEE Transactions on Pattern Analysis and Machine Intelligence 18(8), 837–842 (1996)

    Article  Google Scholar 

  7. Varma, M., Zisserman, A.: Classifying images of materials: Achieving viewpoint and illumination independence. In: Heyden, A., Sparr, G., Nielsen, M., Johansen, P. (eds.) ECCV 2002. LNCS, vol. 2352, pp. 255–271. Springer, Heidelberg (2002)

    Chapter  Google Scholar 

  8. Zhang, J., Marszalek, M., Lazebnik, S., Schmid, C.: Local Features and Kernels for Classification of Texture and Object Categories: A Comprehensive Study. International Journal of Computer Vision 73(2), 213–238 (2007)

    Article  Google Scholar 

  9. Tofts, P.S., Brix, G., Buckley, D.L., Evelhoch, J.L., Henderson, E., Knopp, M.V., et al.: Estimating kinetic parameters from dynamic contrast-enhanced T1-weighted MRI of a diffusible tracer: standardized quantities and symbols. J. Magn. Reson. Imaging 10, 223–232 (1999)

    Article  Google Scholar 

  10. Chang, Y.-C., Huang, C.-S., Liu, Y.-J., Chen, J.-H., Lu, Y.-S., Tseng, W.-Y.I.: Angiogenic response of locally advanced breast cancer to neoadjuvant chemotherapy evaluated with parametric histogram from dynamic contrast-enhanced MRI. Physics in Medicine and Biology 49(16), 3593–3602 (2004)

    Article  Google Scholar 

  11. Bishop, C.M.: Pattern recognition and machine learning. Springer, New York (2006)

    MATH  Google Scholar 

  12. Peng, H., Long, F., Ding, C.: Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy. IEEE Transactions on Pattern Analysis and Machine Intelligence 27(8), 1226–1238 (2005)

    Article  Google Scholar 

  13. Chang, C.-C., Lin, C.-J.: LIBSVM: a library for support vector machines (2001), Software available at http://www.csie.ntu.edu.tw/~cjlin/libsvm

  14. Yankeelov, T.E., Luci, J.J., Lepage, M., Li, R., Debusk, L., Charles Lin, P., Price, R.R., Gore, J.C.: Quantitative pharmacokinetic analysis of DCE-MRI data without an arterial input function: a reference region model. Magnetic Resonance Imaging 23(4), 519–529 (2005)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2011 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Maday, P. et al. (2011). Imaging as a Surrogate for the Early Prediction and Assessment of Treatment Response through the Analysis of 4-D Texture Ensembles (ISEPARATE). In: Menze, B., Langs, G., Tu, Z., Criminisi, A. (eds) Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging. MCV 2010. Lecture Notes in Computer Science, vol 6533. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-18421-5_16

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-18421-5_16

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-18420-8

  • Online ISBN: 978-3-642-18421-5

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics