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A DIAMOND Method for Classifying Biological Data

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Medical Biometrics (ICMB 2010)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 6165))

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Abstract

This study proposes an effective method called DIAMOND to classify biological and medical data. Given a set of objects with some classes, DIAMOND separates the objects into different cubes, where each cube is assigned to a class. Via the union of these cubes, we utilize mixed integer programs to induce classification rules with better rates of accuracy, support and compactness. Two practical data sets, one of HSV patient results and the other of Iris flower, are tested to illustrate the advantages of DIAMOND over some current methods.

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References

  1. Li, H.L., Chen, M.H.: Induction of Multiple Criteria Optimal Classification Rules for Biological and Medical Data. Computers in Biology and Medicine 38(1), 42–52 (2008)

    Article  Google Scholar 

  2. Breiman, L., Friedman, J., Olshen, R., Stone, C.: Classification and Regression Trees. Wadsworth International, Belmont (1984)

    MATH  Google Scholar 

  3. Quinlan, R.: C4.5: Programs for Machine Learning. Morgan Kaufman, San Mateo (1993)

    Google Scholar 

  4. Kim, H., Loh, W.Y.: CRUISE User Manual. Technical Report 989. Journal of the American Statistical Association 96, 589–604 (2001)

    Article  MathSciNet  Google Scholar 

  5. Vapnik, V.N.: The Nature of Statistical Learning Thoery. Springer, New York (1995)

    Google Scholar 

  6. Rifkin, R.: Everything old is new again: A Fresh Look at Historical Approaches in Machine Learning. Ph.D. thesis, Massachusetts Institute of Technology, Cambridge, MA (2002)

    Google Scholar 

  7. Katagiri, S., Abe, S.: Incremental Training of Support Vector Machines Using Hyperspheres. Pattern Recognition Letters 27, 1495–1504 (2006)

    Article  Google Scholar 

  8. Bertsimas, D., Shioda, R.: Classification and Regression via Integer Optimization. Operations Research 55(2), 252–271 (2007)

    Article  MATH  MathSciNet  Google Scholar 

  9. Li, H.L.: An Efficient Method for Solving Linear Goal Programming Problems. Journal of Optimization Theory and Applications 9(2), 467–471 (1996)

    Google Scholar 

  10. Fisher, R.A.: The Use of Multiple Measurements in Taxonomic Problems. Annals of Eugenics 7, 179–188 (1936)

    Google Scholar 

  11. Slowinski, K.: Rough classification of HSV patients. In: Slowinski, R. (ed.) Intelligent Decision Support-Handbook of Applications and Advances of the Rough Sets Theory, pp. 77–94. Kluwer, Dordrecht (1992)

    Google Scholar 

  12. Dunn, D.C., Thomas, W.E.G., Hunter, J.O.: An Evaluation of Highly Selective Vagotomy in the Treatment of Chronic Ulcer. Surg. Gynecol. Obstet 150, 145–151 (1980)

    Google Scholar 

  13. Chang, C.C., Lin, C.J.: LIBSVM: a library for support vector machines, Software available at, http://www.csie.ntu.edu.tw/~cjlin/libsvm/index.html

  14. Li, H.L., Lu, H.C.: Global Optimization for Generalized Geometric Programs with Mixed Free-sign Variables. Operations Research 57(3), 701–713 (2009)

    Article  MathSciNet  Google Scholar 

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Li, HL., Huang, YH., Chen, MH. (2010). A DIAMOND Method for Classifying Biological Data. In: Zhang, D., Sonka, M. (eds) Medical Biometrics. ICMB 2010. Lecture Notes in Computer Science, vol 6165. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-13923-9_11

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  • DOI: https://doi.org/10.1007/978-3-642-13923-9_11

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-13922-2

  • Online ISBN: 978-3-642-13923-9

  • eBook Packages: Computer ScienceComputer Science (R0)

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