Abstract
This chapter reports from the utilization of Raman spectroscopic techniques like Raman microscopy, Raman optical activity (ROA), UV-resonance Raman (UVRR)-spectroscopy, surface enhanced Raman spectroscopy (SERS), and tip-enhanced Raman spectroscopy (TERS) for the investigation of viruses and microorganisms, especially bacteria and yeasts for medical and pharmaceutical applications. The application of these Raman techniques allows for the analysis of chemical components of cells and subcellular regions, as well as the monitoring of chemical differences occurring as a result of the growth of microorganisms. In addition, the interaction of microorganisms with active pharmaceutical agents can be investigated. In combination with chemometric methods Raman spectroscopy can also be applied to identify microorganisms both in micro colonies and even on single cells.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
B. Schrader, Infrared and Raman Spectroscopy – Methods and Applications(Wiley-VCH, New York, 1995), p. 786
H.-U. Gremlich, B. Yan (eds.), Infrared and Raman Spectroscopy of Biological Materials (Marcel Dekker, New York, 2001), p. 581
S. Wartewig, R.H.H. Neubert, Adv. Drug Del. Rev. 57, 1144–1170 (2005)
J.R. Baena, B. Lendl, Curr. Opin. Chem. Biol. 8, 534–539 (2004)
J. Popp, P. Rösch, M. Harz, M. Schmitt, K.D. Peschke, O. Ronneberger, H. Burkhardt, Proc. SPIE-Int. Soc. Opt. Eng. 6180, 6180/6241–6180/6249 (2006)
L. Baia, K. Gigant, U. Posset, G. Schottner, W. Kiefer, J. Popp, Appl. Spectrosc. 56, 536–540 (2002)
L. Baia, K. Gigant, U. Posset, R. Petry, G. Schottner, W. Kiefer, J. Popp, Vib. Spectrosc. 29, 245–249 (2002)
S. Nie, S.R. Emory, Science 275, 1102–1106 (1997)
K. Hering, D. Cialla, K. Ackermann, T. Dörfer, R. Möller, H. Schneideweind, R. Mattheis, W. Fritzsche, P. Rösch, J. Popp, Anal. Bioanal. Chem. 390, 113–124 (2008)
L.A. Nafie, Annu. Rev. Phys. Chem. 48, 357–386 (1997)
C. Mathe, G. Gosselin, Antivir. Res. 71, 276–281 (2006)
S.B. Larson, A. McPherson, Curr. Opin. Struct. Biol. 11, 59–65 (2001)
E.W. Blanch, L. Hecht, C.D. Syme, V. Volpetti, G.P. Lomonossoff, K. Nielsen, L.D. Barron, J. Gen. Virol. 83, 2593–2600 (2002)
A.J. Hobro, M. Rouhi, E.W. Blanch, G.L. Conn, Nucleic Acids Res. 35, 1169–1177 (2007)
G.J. Thomas Jr., Annu. Rev. Biophys. Biomol. Struct. 28, 1–27 (1999)
R. Tuma, H. Tsuruta, J.M. Benevides, P.E. Prevelige Jr., G.J. Thomas Jr., Biochemistry 40, 665–674 (2001)
R. Tuma, J.H.K. Bamford, D.H. Bambord, M.P. Russell, G.J. Thomas Jr., J. Mol. Biol. 257, 87–101 (1996)
J.M. Benevides, J.T. Juuti, R. Tuma, D.H. Bamford, G.J. Thomas Jr., Biochemistry 41, 11946–11953 (2002)
P.J. Lambert, A.G. Whitman, O.F. Dyson, S.M. Akula, Virol. J. 3, 51 (2006)
Z.Q. Wen, G.J. Thomas Jr., Biopolymers 45, 247–256 (1998)
Z.Q. Wen, S.A. Overman, G.J. Thomas Jr., Biochemistry 36, 7810–7820 (1997)
S.A. Overman, D.M. Kristensen, P. Bondre, B. Hewitt, G.J. Thomas Jr., Biochemistry 43, 13129–13136 (2004)
L.D. Barron, L. Hecht, E.W. Blanch, A.F. Bell, Prog. Biophys. Mol. Biol. 73, 1–49 (2000)
L.D. Barron, F. Zhu, L. Hecht, G.E. Tranter, N.W. Isaacs, J. Mol. Struct. 834–836, 7–16 (2007)
E.W. Blanch, L. Hecht, L.D. Barron, Methods 29, 196–209 (2003).
E.W. Blanch, D.J. Robinson, L. Hecht, L.D. Barron, J. Gen. Virol. 82, 1499–1502 (2002)
E.W. Blanch, D.J. Robinson, L. Hecht, C.D. Syme, K. Nielsen, L.D. Barron, J. Gen. Virol. 83, 241–246 (2002)
R.A. Tripp, R.A. Dluhy, Y. Zhao, Nano Today 3, 31–37 (2008)
J.M. Reyes-Goddard, H. Barr, N. Stone, Photodiagn. Photodyn. Ther. 5, 42–49 (2008)
T.A. Alexander, Anal. Chem. 80, 2817–2825 (2008)
S. Shanmukh, L. Jones, J. Driskell, Y. Zhao, R. Dluhy, R.A. Tripp, Nano Lett. 6, 2630–2636 (2006)
S. Shanmukh, L. Jones, Y.P. Zhao, J.D. Driskell, R.A. Tripp, R.A. Dluhy, Anal. Bioanal. Chem. 390, 1551–1555 (2008)
M.B. Wabuyele, T. Vo-Dinh, Anal. Chem. 77, 7810–7815 (2005)
M.Y. Sha, S. Penn, G. Freeman, W.E. Doering, Nanobiotechnology 3, 23–30 (2007)
Y.C. Cao, R. Jin, C.A. Mirkin, Science 297, 1536–1540 (2002)
Y. Liang, J.-L. Gong, Y. Huang, Y. Zheng, J.-H. Jiang, G.-L. Shen, R.-Q. Yu, Talanta 72, 443–449 (2007)
J.D. Driskell, K.M. Kwarta, R.J. Lipert, M.D. Porter, J.D. Neill, J.F. Ridpath, Anal. Chem. 77, 6147–6154 (2005)
W. Xu, S. Xu, X. Ji, B. Song, H. Yuan, L. Ma, Y. Bai, Colloids Surf. B Biointerfaces 40, 169–172 (2005)
D. Cialla, T. Deckert-Gaudig, C. Budich, M. Laue, R. Möller, D. Naumann, V. Deckert, J. Popp, J. Raman Spectrosc. 40, 240–243 (2008)
K. Maquelin, L.-P.I. Choo-Smith, T. Van Vreeswijk, H.P. Endtz, B. Smith, R. Bennett, H.A. Bruining, G.J. Puppels, Anal. Chem. 72, 12–19 (2000)
L.P. Choo-Smith, K. Maquelin, T. Van Vreeswijk, H.A. Bruining, G.J. Puppels, N.A.N. Thi, C. Kirschner, D. Naumann, D. Ami, A.M. Villa, F. Orsini, S.M. Doglia, H. Lamfarraj, G.D. Sockalingum, M. Manfait, P. Allouch, H.P. Endtz, Appl. Environ. Microbiol. 67, 1461–1469 (2001)
P. Rösch, M. Schmitt, W. Kiefer, J. Popp, J. Mol. Struct. 661–662, 363–369 (2003)
D. Hutsebaut, K. Maquelin, P. De Vos, P. Vandenabeele, L. Moens, G.J. Puppels, Anal. Chem. 76, 6274–6281 (2004)
M. Harz, P. Rösch, K.-D. Peschke, O. Ronneberger, H. Burkhardt, J. Popp, Analyst 130, 1543–1550 (2005)
P. Rösch, M. Harz, M. Schmitt, K.-D. Peschke, O. Ronneberger, H. Burkhardt, H.-W. Motzkus, M. Lankers, S. Hofer, H. Thiele, J. Popp, Appl. Environ. Microbiol. 71, 1626–1637 (2005)
K. Maquelin, C. Kirschner, L.P. Choo-Smith, N.A. Ngo-Thi, T. van Vreeswijk, M. Stammler, H.P. Endtz, H.A. Bruining, D. Naumann, G.J. Puppels, J. Clin. Microbiol. 41, 324–329 (2003)
C. Kirschner, K. Maquelin, P. Pina, N.A.N. Thi, L.P. Choo-Smith, G.D. Sockalingum, C. Sandt, D. Ami, F. Orsini, S.M. Doglia, P. Allouch, M. Mainfait, G.J. Puppels, D. Naumann, J. Clin. Microbiol. 39, 1763–1770 (2001)
K. Maquelin, L. Dijkshoorn, J.K. van der Reijden Tanny, J. Puppels Gerwin, J. Microbiol. Methods 64, 126–131 (2006)
L.J. Goeller, M.R. Riley, Appl. Spectrosc. 61, 679–685 (2007)
D. Hutsebaut, J. Vandroemme, J. Heyrman, P. Dawyndt, P. Vandenabeele, L. Moens, P. de Vos, Syst. Appl. Microbiol. 29, 650–660 (2006)
P.C.A.M. Buijtels, H.F.M. Willemse-Erix, P.L.C. Petit, H.P. Endtz, G.J. Puppels, H.A. Verbrugh, A. van Belkum, D. van Soolingen, K. Maquelin, J. Clin. Microbiol. 46, 961–965 (2008)
M.F. Escoriza, J.M. Vanbriesen, S. Stewart, J. Maier, Appl. Spectrosc. 60, 971–976 (2006)
A. Oust, T. Moeretroe, K. Naterstad, G.D. Sockalingum, I. Adt, M. Manfait, A. Kohler, Appl. Environ. Microbiol. 72, 228–232 (2006)
A.J. Berger, Q. Zhu, J. Mod. Opt. 50, 2375–2380 (2003)
Q. Zhu, R.G. Quivey Jr., A.J. Berger, Appl. Spectrosc. 61, 1233–1237 (2007)
J. De Gelder, D. Willemse-Erix, M.J. Scholtes, J.I. Sanchez, K. Maquelin, P. Vandenabeele, P. De Boever, G.J. Puppels, L. Moens, P. De Vos, Anal. Chem. 80, 2155–2160 (2008)
M.F. Escoriza, J.M. VanBriesen, S. Stewart, J. Maier, P.J. Treado, J. Microbiol. Methods 66, 63–72 (2006)
H. Yang, J. Irudayaraj, J. Mol. Struct. 646, 35–43 (2003)
K.C. Schuster, E. Urlaub, J.R. Gapes, J. Microbiol. Methods 42, 29–38 (2000)
W.E. Huang, R.I. Griffiths, I.P. Thompson, M.J. Bailey, A.S. Whiteley, Anal. Chem. 76, 4452–4458 (2004)
U. Neugebauer, U. Schmid, K. Baumann, W. Ziebuhr, S. Kozitskaya, V. Deckert, M. Schmitt, J. Popp, ChemPhysChem. 8, 124–137 (2007)
U. Neugebauer, U. Schmid, K. Baumann, W. Ziebuhr, S. Kozitskaya, U. Holzgrabe, M. Schmitt, J. Popp, J. Phys. Chem. A 111, 2898–2906 (2007)
M. Mock, A. Fouet, Annu. Rev. Microbiol. 55, 647–671 (2001)
W.L. Nicholson, Cell. Mol. Life Sci. 59, 410–416 (2002)
M.-J. Lee, D.-H. Bae, D.-H. Lee, K.-H. Jang, D.-H. Oh, S.-D. Ha, J. Microbiol. Biotechnol. 16, 639–642 (2006)
J. De Gelder, P. Scheldeman, K. Leus, M. Heyndrickx, P. Vandenabeele, L. Moens, P. De Vos, Anal. Bioanal. Chem. 389, 2143–2151 (2007)
K.S. Kalasinsky, T. Hadfield, A.A. Shea, V.F. Kalasinsky, M.P. Nelson, J. Neiss, A.J. Drauch, G.S. Vanni, P.J. Treado, Anal. Chem. 79, 2658–2673 (2007)
A. Tripathi, R.E. Jabbour, P.J. Treado, J.H. Neiss, M.P. Nelson, J.L. Jensen, A.P. Snyder, Appl. Spectrosc. 62, 1–9 (2008)
P. Rösch, M. Harz, K.-D. Peschke, O. Ronneberger, H. Burkhardt, A. Schuele, G. Schmauz, M. Lankers, S. Hofer, H. Thiele, H.-W. Motzkus, J. Popp, Anal. Chem. 78, 2163–2170 (2006)
M. Krause, B. Radt, P. Rösch, J. Popp, J. Raman Spectrosc. 38, 369–372 (2007)
M. Krause, P. Rösch, B. Radt, J. Popp, Anal. Chem. 80, 8568–8575 (2008)
M. Krause, B. Beyer, C. Pietsch, B. Radt, M. Harz, P. Rösch, J. Popp, Proc. SPIE 6991, 69910E/69911–69910E/69918 (2008)
J.W. Chan, A.P. Esposito, C.E. Talley, C.W. Hollars, S.M. Lane, T. Huser, Anal. Chem. 76, 599–603 (2004)
C. Xie, J. Mace, M.A. Dinno, Y.Q. Li, W. Tang, R.J. Newton, P.J. Gemperline, Anal. Chem. 77, 4390–4397 (2005)
S.-S. Huang, D. Chen, P.L. Pelczar, V.R. Vepachedu, P. Setlow, Y.-Q. Li, J. Bacteriol. 189, 4681–4687 (2007)
C.G. Xie, D. Chen, Y.Q. Li, Opt. Lett. 30, 1800–1802 (2005)
C. Xie, Y.-Q. Li, J. Appl. Phys. 93, 2982–2986 (2003)
R.M. Jarvis, R. Goodacre, FEMS Microbiol. Lett. 232, 127–132 (2004)
W.H. Nelson, R. Dasari, M. Feld, J.F. Sperry, Appl. Spectrosc. 58, 1408–1412 (2004)
E.C. Lopez-Diez, R. Goodacre, Anal. Chem. 76, 585–591 (2004)
K. Gaus, P. Rösch, R. Petry, K.-D. Peschke, O. Ronneberger, H. Burkhardt, K. Baumann, J. Popp, Biopolymers 82, 286–290 (2006)
J. Grun, C.K. Manka, S. Nikitin, D. Zabetakis, G. Comanescu, D. Gillis, J. Bowles, Anal. Chem. 79, 5489–5493 (2007)
E.C. Lopez-Diez, C.L. Winder, L. Ashton, F. Currie, R. Goodacre, Anal. Chem. 77, 2901–2906 (2005)
U. Neugebauer, U. Schmid, K. Baumann, U. Holzgrabe, W. Ziebuhr, S. Kozitskaya, W. Kiefer, M. Schmitt, J. Popp, Biopolymers 82, 306–311 (2006)
S. Efrima, B.V. Bronk, J. Phys. Chem. B 102, 5947–5950 (1998)
L. Zeiri, B.V. Bronk, Y. Shabtai, J. Czege, S. Efrima, Colloid Surf. A Physicochem. Eng. Asp. 208, 357–362 (2002)
L. Zeiri, S. Efrima, J. Raman Spectrosc. 36, 667–675 (2005)
L. Zeiri, B.V. Bronk, Y. Shabtai, J. Eichler, S. Efrima, Appl. Spectrosc. 58, 33–40 (2004)
Y. Liu, Y.-R. Chen, X. Nou, K. Chao, Appl. Spectrosc. 61, 824–831 (2007)
M.L. Laucks, A. Sengupta, K. Junge, E.J. Davis, B.D. Swanson, Appl. Spectrosc. 59, 1222–1228 (2005)
A. Sengupta, M. Mujacic, E.J. Davis, Anal. Bioanal. Chem. 386, 1379–1386 (2006)
A. Sengupta, N. Brar, E.J. Davis, J. Colloid Interface Sci. 309, 36–43 (2007)
L.J. Goeller, M.R. Riley, Appl. Spectrosc. 61, 679–685 (2007)
R.M. Jarvis, R. Goodacre, Anal. Chem. 76, 40–47 (2004)
R.M. Jarvis, A. Brooker, R. Goodacre, Anal. Chem. 76, 5198–5202 (2004)
R.M. Jarvis, A. Brooker, R. Goodacre, Faraday Discuss. 132, 281–292 (2006)
S. Farquharson, A.D. Gift, P. Maksymiuk, F.E. Inscore, Appl. Spectrosc. 58, 351–354 (2004)
X. Zhang, M.A. Young, O. Lyandres, R.P. Van Duyne, J. Am. Chem. Soc. 127, 4484–4489 (2005)
S. Farquharson, L. Grigely, V. Khitrov, W. Smith, J.F. Sperry, G. Fenerty, J. Raman Spectrosc. 35, 82–86 (2004)
J. Guicheteau, L. Argue, D. Emge, A. Hyre, M. Jacobson, S. Christesen, Appl. Spectrosc. 62, 267–272 (2008)
A.E. Grow, L.L. Wood, J.L. Claycomb, P.A. Thompson, J. Microbiol. Methods 53, 221–233 (2003)
W.R. Premasiri, D.T. Moir, M.S. Klempner, N. Krieger, G. Jones, II, L.D. Ziegler, J. Phys. Chem. B 109, 312–320 (2005).
V. Biju, D. Pan, Y.A. Gorby, J. Fredrickson, J. McLean, D. Saffarini, H.P. Lu, Langmuir 23, 1333–1338 (2007)
U. Neugebauer, P. Rösch, M. Schmitt, J. Popp, C. Julien, A. Rasmussen, C. Budich, V. Deckert, ChemPhysChem. 7, 1428–1430 (2006)
C. Budich, U. Neugebauer, J. Popp, V. Deckert, J. Microsc. 229, 533–539 (2008)
M.S. Ibelings, K. Maquelin, H.P. Endtz, H.A. Bruining, G.J. Puppels, Clin. Microbiol. Infect. 11, 353–358 (2005)
C. Cannizzaro, M. Rhiel, I. Marison, U. von Stockar, Biotechnol. Bioeng. 83, 668–680 (2003)
A. Picard, I. Daniel, G. Montagnac, P. Oger, Extremophiles 11, 445–452 (2007)
P. Dostalek, M. Patzak, P. Matejka, Int. Biodeterior. Biodegr. 54, 203–207 (2004)
P. Rösch, M. Harz, M. Schmitt, J. Popp, J. Raman Spectrosc. 36, 377–379 (2005)
P. Rösch, M. Harz, K.D. Peschke, O. Ronneberger, H. Burkhardt, J. Popp, Biopolymers 82, 312–316 (2006)
Y.-S. Huang, T. Karashima, M. Yamamoto, H.-O. Hamaguchi, Biochemistry 44, 10009–10019 (2005)
Y.-S. Huang, T. Karashima, M. Yamamoto, T. Ogura, H. Hamaguchi, J. Raman Spectrosc. 35, 525–526 (2004)
Y.-S. Huang, T. Nakatsuka, H.-O. Hamaguchi, Appl. Spectrosc. 61, 1290–1294 (2007)
R. Gessner, C. Winter, P. Rösch, M. Schmitt, R. Petry, W. Kiefer, M. Lankers, J. Popp, ChemPhysChem. 5, 1159–1170 (2004)
C. Xie, Y.-Q. Li, W. Tang, R.J. Newton, J. Appl. Phys. 94, 6138–6142 (2003)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2010 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Harz, M., Stöckel, S., Ciobotă, V., Cialla, D., Rösch, P., Popp, J. (2010). Applications of Raman Spectroscopy to Virology and Microbial Analysis. In: Matousek, P., Morris, M. (eds) Emerging Raman Applications and Techniques in Biomedical and Pharmaceutical Fields. Biological and Medical Physics, Biomedical Engineering. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02649-2_19
Download citation
DOI: https://doi.org/10.1007/978-3-642-02649-2_19
Published:
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-02648-5
Online ISBN: 978-3-642-02649-2
eBook Packages: Physics and AstronomyPhysics and Astronomy (R0)