Skip to main content

Single Cell Physiology

  • Chapter
  • First Online:

Part of the book series: Springer Series in Chemical Physics ((CHEMICAL,volume 96))

Summary

The possibility to control at specific times and specific places the activity of biomolecules (enzymes, transcription factors, RNA, hormones, etc.) is opening up new opportunities in the study of physiological processes at the single cell level in a live organism. Most existing gene expression systems allow for tissue specific induction upon feeding the organism with exogenous inducers (e.g., tetracycline). Local genetic control has earlier been achieved by micro-injection of the relevant inducer/repressor molecule, but this is an invasive and possibly traumatic technique. In this chapter, we present the requirements for a noninvasive optical control of the activity of biomolecules and review the recent advances in this new field of research.

This is a preview of subscription content, log in via an institution.

Buying options

Chapter
USD   29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   169.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. J. Gerhart, M. Kirschner, Cells, Embryos, and Evolution (Blackwell Science, London, 1997)

    Google Scholar 

  2. H. Kitano, Science 295, 1662–1664 (2002)

    Article  ADS  Google Scholar 

  3. R.H. Singer, D.S. Lawrence, B. Ovryn, J. Condeelis, J. Biomed. Opt. 10, 051406 (2005)

    Article  ADS  Google Scholar 

  4. A.D. Ryding, M.G. Sharp, J.J. Mullins, J. Endocrinol. 171, 1–14 (2001)

    Article  Google Scholar 

  5. K. Haas, W.C. Sin, A. Javaherian, Z. Li, H.T. Cline, Neuron 29, 583–591 (2001)

    Article  Google Scholar 

  6. M. Goeldner, R. Givens (eds.), Dynamic studies in biology. Phototriggers, photoswitches and caged biomolecules (Wiley, Weinheim, 2005)

    Google Scholar 

  7. G. Mayer, A. Heckel, Angew. Chem. Int. Ed. Engl. 45, 4900–4921 (2006)

    Article  Google Scholar 

  8. G.C. Ellis-Davies, Nat. Meth. 4, 619–628 (2007)

    Article  Google Scholar 

  9. W. Denk, J.H. Strickler, W.W. Webb, Science 248, 73–76 (1990)

    Article  ADS  Google Scholar 

  10. P.S. Tsai, B. Friedman, A.I. Ifarraguerri, B.D. Thompson, V. Lev-Ram, C.B. Schaffer, Q. Xiong, R.Y. Tsien, J.A. Squier, D. Kleinfeld, Neuron 39, 27–41 (2003)

    Article  Google Scholar 

  11. E.J. Peterman, F. Gittes, C.F. Schmidt, Biophys. J. 84, 1308–1316 (2003)

    Article  ADS  Google Scholar 

  12. N. Gagey, P. Neveu, L. Jullien, Angew. Chem. Int. Ed. Engl. 46, 2467–2469 (2007)

    Article  Google Scholar 

  13. J. Engels, E.J. Schlaeger, J. Med. Chem. 20, 907–911 (1977)

    Google Scholar 

  14. G.C. Ellis-Davies, Chem. Rev. 108, 1603–1613 (2008)

    Article  Google Scholar 

  15. J.H. Kaplan, R.J. Hollis, Nature 288, 587–589 (1980)

    Article  ADS  Google Scholar 

  16. K. Fendler, E. Grell, M. Haubs, E. Bamberg, EMBO J. 4, 3079–3085 (1985)

    Google Scholar 

  17. Y.E. Goldman, M.G. Hibberd, J.A. McCray, D.R. Trentham, Nature 300, 701–705 (1982)

    Article  ADS  Google Scholar 

  18. P.G. Fajer, E.A. Fajer, D.D. Thomas, Proc. Natl. Acad. Sci. U S A 87, 5538–5542 (1990)

    Article  ADS  Google Scholar 

  19. H. Higuchi, E. Muto, Y. Inoue, T. Yanagida, Proc. Natl. Acad. Sci. U S A 94, 4395–4400 (1997)

    Article  ADS  Google Scholar 

  20. G. Lowe, G.H. Gold, Proc. Natl. Acad. Sci. U S A 92, 7864–7868 (1995)

    Article  ADS  Google Scholar 

  21. T. Kurahashi, A. Menini, Nature 385, 725–729 (1997)

    Article  ADS  Google Scholar 

  22. X. Nicol, S. Voyatzis, A. Muzerelle, N. Narboux-Nême, T.C. Südhof, R. Miles, P. Gaspar, Nat. Neurosci. 10, 340–347 (2007)

    Article  Google Scholar 

  23. M. Volgraf, P. Gorostiza, R. Numano, R.H. Kramer, E.Y. Isacoff, D. Trauner, Nat. Chem. Biol. 2, 47–52 (2006)

    Article  Google Scholar 

  24. F. Zhang, L.P. Wang, M. Brauner, J.F. Liewald, K. Kay, N. Watzke, P.G. Wood, E. Bamberg, G. Nagel, A. Gottschalk, K. Deisseroth, Nature 446, 633–639 (2007)

    Article  ADS  Google Scholar 

  25. M. Matsuzaki, G.C. Ellis-Davies, T. Nemoto, Y. Miyashita, M. Iino, H. Kasai Nat. Neurosci. 4, 1086–1092 (2001)

    Google Scholar 

  26. M. Matsuzaki, N. Honkura, G.C. Ellis-Davies, H. Kasai, Nature 429, 761–766 (2004)

    Article  ADS  Google Scholar 

  27. C.D. Harvey, K. Svoboda, Nature 450, 1195–1200 (2007)

    Article  ADS  Google Scholar 

  28. J. Tanaka, Y. Horiike, M. Matsuzaki, T. Miyazaki, G.C. Ellis-Davies, H. Kasai, Science 319, 1683–1687 (2008)

    Article  ADS  Google Scholar 

  29. M. Häusser, S.L. Smith, Nature 446, 617–619 (2007)

    Article  ADS  Google Scholar 

  30. P. Gorostiza, E.Y. Isacoff, Science 322, 395–399 (2008)

    Article  MathSciNet  ADS  Google Scholar 

  31. F. Zhang, A.M. Aravanis, A. Adamantidis, L. de Lecea, K. Deisseroth, Nat. Rev. Neurosci. 8, 577–581 (2007)

    Article  Google Scholar 

  32. S.H. Chalasani, N. Chronis, M. Tsunozaki, J.M. Gray, D. Ramot, M.B. Goodman, C.I. Bargmann, Nature 450, 63–71 (2007)

    Article  ADS  Google Scholar 

  33. D. Huber, L. Petreanu, N. Ghitani, S. Ranade, T. Hromádka, Z. Mainen, K. Svoboda, Nature 451, 61–64 (2008)

    Article  ADS  Google Scholar 

  34. M. Gossen, H. Bujard, Proc. Natl. Acad. Sci. USA 89, 5547–5551 (1992)

    Article  ADS  Google Scholar 

  35. D. No, T.P. Yao, R.M. Evans, Proc. Natl. Acad. Sci. USA 93, 3346–3351 (1996)

    Article  ADS  Google Scholar 

  36. W. Lin, C. Albanese, R.G. Pestell, D.S. Lawrence, Chem. Biol. 9, 1347–1353 (2002)

    Article  Google Scholar 

  37. S.B. Cambridge, D. Geissler, S. Keller, B. Curten, Angew. Chem. Int. Ed. Engl. 45, 2229–2231 (2006)

    Article  Google Scholar 

  38. H. Ando, T. Furuta, R.Y. Tsien, H. Okamoto, Nat. Genet. 28, 317–325 (2001)

    Article  Google Scholar 

  39. I.A. Shestopalov, S. Sinha, J.K. Chen, Nat. Chem. Biol. 3, 650–651 (2007)

    Article  Google Scholar 

  40. X.J. Tang, S. Maegawa, E.S. Weinberg, I.J. Dmochowski, J. Am. Chem. Soc. 129, 11000–11001 (2007)

    Article  Google Scholar 

  41. T. Gregor, D.W. Tank, E.F. Wieschaus, W. Bialek, Cell 130, 153–164 (2007)

    Article  Google Scholar 

  42. G.C. Vilhais-Neto, O. Pourquié, Curr. Biol. 18, R191–R192 (2008)

    Article  Google Scholar 

  43. G. Duester, Cell 134, 921–931 (2008)

    Article  Google Scholar 

  44. P. Neveu, I. Aujard, C. Benbrahim, T. Le Saux, J.F. Allemand, S. Vriz, D. Bensimon, L. Jullien, Angew. Chem. Int. Ed. Engl. 47, 3744–3746 (2008)

    Article  Google Scholar 

  45. A. Goldbeter, D. Gonze, O. Pourquié, Dev. Dyn. 236, 1495–1508 (2007)

    Article  Google Scholar 

  46. S.B. Cambridge, R.L. Davis, J.S. Minden, Science 277, 825–828 (1997)

    Article  Google Scholar 

  47. W.B. Pratt, Y. Morishima, Y. Osawa, J. Biol. Chem. 283, 22885–22889 (2008)

    Google Scholar 

  48. D. Metzger, J. Clifford, H. Chiba, P. Chambon, Proc. Natl. Acad. Sci. USA 92, 6991–6995 (1995)

    Article  ADS  Google Scholar 

Download references

Acknowledgements

We thank Frédéric Rosa and Shuo Lin for access to their fish facilities, and Laure Bally-Cuif and Christof Leucht for the gift of the zebrafish line used for the Cre reporter experiments. This work has been supported by Association pour la Recherche sur le Cancer. PN research is supported in part by the National Science Foundation under Grant No. PHY05-51164. DKS acknowledges support from the NABI CNRS-Weizmann Institute program and DB the partial support of a PUF ENS-UCLA grant.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Pierre Neveu .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2010 Springer-Verlag Berlin Heidelberg

About this chapter

Cite this chapter

Neveu, P., Sinha, D.K., Kettunen, P., Vriz, S., Jullien, L., Bensimon, D. (2010). Single Cell Physiology. In: Gräslund, A., Rigler, R., Widengren, J. (eds) Single Molecule Spectroscopy in Chemistry, Physics and Biology. Springer Series in Chemical Physics, vol 96. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02597-6_16

Download citation

  • DOI: https://doi.org/10.1007/978-3-642-02597-6_16

  • Published:

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-02596-9

  • Online ISBN: 978-3-642-02597-6

  • eBook Packages: Physics and AstronomyPhysics and Astronomy (R0)

Publish with us

Policies and ethics