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A Non-rigid Registration Framework That Accommodates Resection and Retraction

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Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 5636))

Abstract

Traditional non-rigid registration algorithms are incapable of accurately registering intra-operative with pre-operative images whenever tissue has been resected or retracted. In this work we present methods for detecting and handling retraction and resection. The registration framework is based on the bijective Demons algorithm using an anisotropic diffusion smoother. Retraction is detected at areas of the deformation field with high internal strain and the estimated retraction boundary is integrated as a diffusion boundary in the smoother to allow discontinuities to develop across the resection boundary. Resection is detected by a level set method evolving in the space where image intensities disagree. The estimated resection is integrated into the smoother as a diffusion sink to restrict image forces originating inside the resection from being diffused to surrounding areas. In addition, the deformation field is continuous across the diffusion sink boundary which allow us to move the boundary of the diffusion sink without changing values in the deformation field (no interpolation or extrapolation is needed). We present preliminary results on both synthetic and clinical data which clearly shows the added value of explicitly modeling these processes in a registration framework.

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References

  1. Hartkens, T., Hill, D.L.G., Castellano-Smith, A.D., Hawkes, D.J., Maurer, C.R., Martin, A.J., Hall, W.A., Liu, H., Truwit, C.L.: Measurement and analysis of brain deformation during neurosurgery. IEEE Transactions on Medical Imaging 22(1), 82–92 (2003)

    Article  Google Scholar 

  2. Periaswamy, S., Farid, H.: Medical image registration with partial data. Medical Image Analysis 10, 452–464 (2006)

    Article  Google Scholar 

  3. Miga, M.I., Roberts, D.W., Kennedy, F.E., Platenik, L.A., Hartov, A., Lunn, K.E., Paulsen, K.D.: Modeling of retraction and resection for intraoperative updating of images. Neurosurgery 1(1), 75–85 (2001)

    Google Scholar 

  4. Thirion, J.P.: Image matching as a diffusion process: an analogy with Maxwell’s demons. Medical Image Analysis 2(3), 243–260 (1998)

    Article  Google Scholar 

  5. Hellier, P., Barillot, C., Corouge, I., Gibaud, B., Le Goualher, G., Collins, D.L., Evans, A., Malandain, G., Ayache, N., Christensen, G.E., Johnson, H.J.: Retrospective evaluation of intersubject brain registration. IEEE Trans. Med. Imaging 22(9), 1120–1130 (2003)

    Article  MATH  Google Scholar 

  6. Cachier, P., Bardinet, E., Dormont, D., Pennec, X., Ayache, N.: Iconic feature based nonrigid registration: the pasha algorithm. Comput. Vis. Image Underst. 89(2-3), 272–298 (2003)

    Article  MATH  Google Scholar 

  7. Perona, P., Malik, J.: Scale-space and edge detection using anisotropic diffusion. IEEE Trans. Pattern Anal. Mach. Intell. 12(7), 629–639 (1990)

    Article  Google Scholar 

  8. Alvarez, L., Deriche, R., Papadopoulo, T., Sánchez, J.: Symmetrical dense optical flow estimation with occlusions detection. Int. J. Comput. Vision 75(3), 371–385 (2007)

    Article  MATH  Google Scholar 

  9. Noblet, V., Heinrich, C., Heitz, F., Armspach, J.P.: 3-D deformable image registration: a topology preservation scheme based on hierarchical deformation models and interval analysis optimization. IEEE Transactions on Image Processing 14(5), 553–566 (2005)

    Article  MathSciNet  Google Scholar 

  10. Müller, M., McMillan, L., Dorsey, J., Jagnow, R.: Real-time simulation of deformation and fracture of stiff materials. In: Proceedings of the Eurographic workshop on Computer animation and simulation, pp. 113–124. Springer, New York (2001)

    Google Scholar 

  11. Osher, S.J., Fedkiw, R.P.: Level Set Methods and Dynamic Implicit Surfaces. Springer, Heidelberg (2002)

    MATH  Google Scholar 

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© 2009 Springer-Verlag Berlin Heidelberg

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Risholm, P., Samset, E., Talos, IF., Wells, W. (2009). A Non-rigid Registration Framework That Accommodates Resection and Retraction. In: Prince, J.L., Pham, D.L., Myers, K.J. (eds) Information Processing in Medical Imaging. IPMI 2009. Lecture Notes in Computer Science, vol 5636. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02498-6_37

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  • DOI: https://doi.org/10.1007/978-3-642-02498-6_37

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-02497-9

  • Online ISBN: 978-3-642-02498-6

  • eBook Packages: Computer ScienceComputer Science (R0)

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