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DNA Library Screening, Pooling Design and Unitary Spaces

  • Conference paper
Combinatorial Optimization and Applications (COCOA 2009)

Part of the book series: Lecture Notes in Computer Science ((LNTCS,volume 5573))

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Abstract

Pooling design is an important research topic in bio- informatics due to its wide applications in molecular biology, especially DNA library screening. In this paper, with unitary spaces over finite fields, we present two new constructions whose efficiency ratio, i.e., the ratio between the number of tests and the number of items, is smaller than some of existing construction.

Support in part by Natural Science Foundation of Hebei Province, China (No. A2008000128), Natural Science Foundation of Educational Committee of Hebei Province, China (No. 2007137), and National Science Foundation under grants CCF 0621829 and 0627233.

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Author information

Authors and Affiliations

  1. Mathematics and Information College, Hebei Normal University, Shijiazhuang, 050016, China

    Suogang Gao

  2. Mathematics and Information College, Langfang Normal College, Langfang, 065000, China

    Zengti Li

  3. Department of Computer Science, University of Texas at Dallas, Richardson, Texas, 75080, USA

    Jiangchen Yu, Xiaofeng Gao & Weili Wu

Authors
  1. Suogang Gao
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  2. Zengti Li
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  3. Jiangchen Yu
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  4. Xiaofeng Gao
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  5. Weili Wu
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Editor information

Editors and Affiliations

  1. Department of Computer Science, University of Texas at Dallas, 800 West Campbell Road, TX 75080-3021, Richardson, USA

    Ding-Zhu Du

  2. Chinese Academy of Sciences, Institute of Applied Mathematics, Zhong Guan Cun Dong Lu 55, 100190, Beijing, P. R. China

    Xiaodong Hu

  3. Department of Industrial and Systems Engineering, University of Florida, 303 Weil Hall, P.O. Box 116595, FL 32611-6595, Gainesville, USA

    Panos M. Pardalos

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© 2009 Springer-Verlag Berlin Heidelberg

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Gao, S., Li, Z., Yu, J., Gao, X., Wu, W. (2009). DNA Library Screening, Pooling Design and Unitary Spaces. In: Du, DZ., Hu, X., Pardalos, P.M. (eds) Combinatorial Optimization and Applications. COCOA 2009. Lecture Notes in Computer Science, vol 5573. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-02026-1_5

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  • DOI: https://doi.org/10.1007/978-3-642-02026-1_5

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-02025-4

  • Online ISBN: 978-3-642-02026-1

  • eBook Packages: Computer ScienceComputer Science (R0)

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