Skip to main content

Genus Zero Surface Conformal Mapping and Its Application to Brain Surface Mapping

  • Conference paper
Information Processing in Medical Imaging (IPMI 2003)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 2732))

Abstract

It is well known that any genus zero surface can be mapped conformally onto the sphere and any local portion thereof onto a disk. However, it is not trivial to find a general method which finds a conformal mapping between two general genus zero surfaces. We propose a new variational method which can find a unique mapping between any two genus zero manifolds by minimizing the harmonic energy of the map. We demonstrate the feasibility of our algorithm by applying it to the cortical surface matching problem. We use a mesh structure to represent the brain surface. Further constraints are added to ensure that the conformal map is unique. Empirical tests on MRI data show that the mappings preserve angular relationships, are stable in MRIs acquired at different times, and are robust to differences in data triangulation, and resolution. Compared with other brain surface conformal mapping algorithms, our algorithm is more stable and has good extensibility.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Fischl, B., Sereno, M.I., Tootell, R.B.H., Dale, A.M.: High-resolution intersubject averaging and a coordinate system for the cortical surface. Human Brain Mapping 8, 272–284 (1999)

    Article  Google Scholar 

  2. Hurdal, M.K., Stephenson, K., Bowers, P.L., Sumners, D.W.L., Rottenberg, D.A.: Coordinate systems for conformal cerebellar flat maps. NeuroImage 11, S467 (2000)

    Article  Google Scholar 

  3. Haker, S., Angenent, S., Tannenbaum, A., Kikinis, R., Sapiro, G., Halle, M.: Conformal surface parameterization for texture mapping. IEEE Transactions on Visualization and Computer Graphics 6(2), 181–189 (2000)

    Article  Google Scholar 

  4. Thompson, P.M., Mega, M.S., Vidal, C., Rapoport, J.L., Toga, A.W.: Detecting disease-specific patterns of brain structure using cortical pattern matching and a population-based probabilistic brain atlas. In: Insana, M.F., Leahy, R.M. (eds.) IPMI 2001. LNCS, vol. 2082, pp. 488–501. Springer, Heidelberg (2001)

    Chapter  Google Scholar 

  5. Thompson, P.M., Toga, A.W.: A framework for computational anatomy. Computing and Visualization in Science 5, 1–12 (2002)

    Article  Google Scholar 

  6. Gu, X., Yau, S.: Computing conformal structures of surfaces. Communications in Information and Systems 2(2), 121–146 (2002)

    MATH  MathSciNet  Google Scholar 

  7. Gu, X., Yau, S.: Global conformal surface parameterization (December 2002) (preprint)

    Google Scholar 

  8. Eck, M., DeRose, T., Duchamp, T., Hoppe, H., Lounsbery, M., Stuetzle, W.: Multiresolution analysis of arbitrary meshes. In: Computer Graphics (Proceedings of SIGGRAPH 1995) (August 1995)

    Google Scholar 

  9. Schoen, R., Yau, S.T.: Lectures on Harmonic Maps. International Press, Harvard University (1997)

    MATH  Google Scholar 

  10. Alliez, P., Meyer, M., Desbrun, M.: Interactive geometry remeshing. In: Computer Graphics (Proceedings of SIGGRAPH 2002), pp. 347–354 (2002)

    Google Scholar 

  11. Desbrun, M., Meyer, M., Alliez, P.: Intrinsic parametrizations of surface meshes. In: Proceedings of Eurographics (2002)

    Google Scholar 

  12. Pinkall, U., Polthier, K.: Computing discrete minimal surfaces and their conjugates. Experim. Math. 2(1), 15–36 (1993)

    MATH  MathSciNet  Google Scholar 

  13. Kanai, T., Suzuki, H., Kimura, F.: Three-dimensional geometric metamorphosis based on harmonic maps. The Visual Computer 14(4), 166–176 (1998)

    Article  Google Scholar 

  14. Levy, B., Petitjean, S., Ray, N., Maillot, J.: Least squares conformal maps for automatic texture atlas generation. In: Computer Graphics (Proceedings of SIGGRAPH 02), Addison-Wesley, Reading (2002)

    Google Scholar 

  15. Bakircioglu, M., Grenander, U., Khaneja, N., Miller, M.I.: Curve matching on brain surfaces using frenet distances. Human Brain Mapping 6, 329–333 (1998)

    Article  Google Scholar 

  16. Thompson, P., Toga, A.: A surface-based technique for warping 3-dimensional images of the brain. IEEE Transactions on Medical Imaging 15(4), 1–16 (1996)

    Article  Google Scholar 

  17. Memoli, F., Sapiro, G., Osher, S.: Solving variational problems and partial equations mapping into general target manifolds. Technical Report 02–04, CAM Report (January 2002)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2003 Springer-Verlag Berlin Heidelberg

About this paper

Cite this paper

Gu, X., Wang, Y., Chan, T.F., Thompson, P.M., Yau, ST. (2003). Genus Zero Surface Conformal Mapping and Its Application to Brain Surface Mapping. In: Taylor, C., Noble, J.A. (eds) Information Processing in Medical Imaging. IPMI 2003. Lecture Notes in Computer Science, vol 2732. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-45087-0_15

Download citation

  • DOI: https://doi.org/10.1007/978-3-540-45087-0_15

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-40560-3

  • Online ISBN: 978-3-540-45087-0

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics