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A Hierarchical Model of Parallel Genetic Programming Applied to Bioinformatic Problems

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Parallel Processing and Applied Mathematics (PPAM 2003)

Part of the book series: Lecture Notes in Computer Science ((LNCS,volume 3019))

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Abstract

Genetic Programming (GP), an evolutionary method, can be used to solve difficult problems in various applications. However, three important problems in GP are its tendency to find non-parsimonious solutions (bloat), to converge prematurely and to use a tremendous amount of computing time. In this paper, we present an efficient model of distributed GP to limit these general GP drawbacks. This model uses a multi-objective optimization and a hierarchical communication topology.

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© 2004 Springer-Verlag Berlin Heidelberg

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Frey, J., Gras, R., Hernandez, P., Appel, R. (2004). A Hierarchical Model of Parallel Genetic Programming Applied to Bioinformatic Problems. In: Wyrzykowski, R., Dongarra, J., Paprzycki, M., Waśniewski, J. (eds) Parallel Processing and Applied Mathematics. PPAM 2003. Lecture Notes in Computer Science, vol 3019. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-24669-5_147

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  • DOI: https://doi.org/10.1007/978-3-540-24669-5_147

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-21946-0

  • Online ISBN: 978-3-540-24669-5

  • eBook Packages: Springer Book Archive

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