Abstract
In this chapter, two algorithms are developed: Algorithm 1 and Algorithm 2. Algorithm 1 was developed in order to search for the interaction of a polypeptide chain of a full-length protein with short active region. Algorithm 2 was developed to determine the most active sites of interaction between full-length proteins when dimers are formed in the direction from the N-terminus to C-terminus. Numerical calculations were made using proteins Mdm2, Nap1, P53.
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Koshlan, T., Kulikov, K. (2018). Mathematical Modeling Identification of Active Sites Interaction of Protein Molecules. In: Mathematical Modeling of Protein Complexes. Biological and Medical Physics, Biomedical Engineering. Springer, Cham. https://doi.org/10.1007/978-3-319-98304-2_5
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