Abstract
Pomegranate ( Punica granatum L; Punicaceae), is a unique fruit tree with showy edible and healthful fruit which symbolizes fertility and abundance. Breeding of deciduous fruit trees was based until recently on a combination of intuition and science. The development of high throughput sequencing and mapping techniques changed the equation and enable efficient introduction of new scientific tools in breeding. Pomegranate breeding is expected to benefit much as the pomegranate tree is most suitable for genetic analysis. Pomegranate has a short juvenile period , high number of progeny formation by a single genetic cross and is a diploid plant. Indeed, in a relatively short period of time, several transcriptomes from different pomegranate tissues including leaves, fruits and flowers were assembled, the genome was determined and the phylogenetic structure of several collections in different geographical locations was resolved. In parallel with the dramatic development in pomegranate genomics , increased economic interest in the fruit and its products resulted in the establishment of several breeding centers in countries such as Spain, Israel, Turkey Iran, the USA, China and India. The next challenge is now to integrate the data from the scientific achievements into the practice of pomegranate breeding. As genetic engineering is still not efficient for most plants, it is expected that in the short term breeding of new pomegranate cultivars will be based on classical breeding or on marker -assisted selection (MAS ). Despite the prominent progress in pomegranate genomics , functional analysis and identification of genes involved in important agricultural traits were achieved in only very few cases in pomegranate . Finding genetic markers or important genes for fruit quality , content of healthful compounds and resistance to pests and diseases could be among the achievable challenges.
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Appendices
Appendix 1
Major institutes involved in research related to pomegranate
Institute | Research activities | Contact information and website |
---|---|---|
Kabul University, Kabul, Afghanistan | Horticulture, germplasm collection | e-mail: samadigr@yahoo.com; http://ku.edu.af/en |
Department of Biotechnology , Faculty of Natural Sciences, University of Tirana, Albania | Genetics, in vitro propagation | e-mail: ariolabacu@yahoo.com; http://www.unitir.edu.al/ |
Agricultural university of Tirana | Germplasm collection | e-mail: Tatjanakokai@hotmail.com; http://ubt.edu.al/sq/ |
College of Horticulture, Nanjing Agricultural University, Weigang, Nanjing, P.R. China | Genetics | e-mail: fanggg@njau.edu.cn; http://www.nauacademicjobs.com/colleges.html |
Zhengzhou Institute of Pomology of Chinese Academy of Agricultural Sciences, Zhengzhou, P.R. China | Genetics | email: Shangyin Cao 13937192127@163.com; http://en.zzgss.cn/ |
College of Horticulture, Henan Agricultural University, Zhengzhou, P. R. China | Genetics | e-mail: jbhu220@yahoo.com.cn; http://www.henau.edu.cn/ |
Shandong Institute of Pomology, Tai’an, China | Genetics | e-mail: zhyuan88@hotmail.com |
Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, China | Genetics, chemistry | e-mail: yiliuxu@163.com |
Fruit Trees Division, Agricultural Research Institute, Nicosia, Cyprus | Germplasm collection | e-mail: s.ioannidou@ari.gov.cy; http://www.moa.gov.cy/moa/ari/ari.nsf/contact_en/ |
University of Horticulture and Food Industry, Budapest, Hungary | Germplasm collection | |
Conservation Biology and Molecular Taxonomy , National Botanical Research Institute (CSIR), Lucknow, Uttar Pradesh, India | Genetics | e-mail: ranats@nbri.res.in; http://www.nbri.res.in/ |
ICAR-National Research Center on Pomegranate , Kegaon, Solapur, Maharashtra, India | Horticulture, genetics, breeding’ germplasm collection | e-mails: rchandranrcp@gmail.com; jyotisharma128@yahoo.com; nripendras72@gmail.com; http://nrcpomegranate.icar.gov.in/Staff |
Mahatma Phule Krishi Vidyapeeth Agricultural University, Rahuri, Maharashtra, India | Germplasm collection | |
Central Arid Zone Research Institute, Jodhpur, Rajasthan, India | Genetics, germplasm collection | e-mail: sksingh1111@hotmail.com; http://cazri.res.in/ |
ICAR-NBPGR (National Bureau of Plant Genetic Resources ), Regional Station Jodhpur, Rajasthan, India | Germplasm collection | e-mail: nbpgr.jodhpur@icar.gov.in; http://www.nbpgr.ernet.in/Regional_Stations/Jodhpur_Rajasthan/did/36.aspx |
Division of Fruit Crops, Indian Institute of Horticultural Research , Bangalore, Karnataka, India | Horticulture, cultivars , breeding, genetics | e-mail: jalikop@iihr.ernet.in; http://www.iihr.res.in/ |
Department of Horticulture, College of Agriculture University of Agricultural Sciences, Bijapur, Karnataka, India | Horticulture | |
Department of Biotechnology , Dr Y S Parmar University of Horticulture and Forestry, Solan, Himachal Pradesh, India | Genetics | e-mail: vipasha.verma@gmail.com; http://www.yspuniversity.ac.in/ |
Sardarkrushinagar Dantiwada Agricultural University, Sardarkrushinaga, Gujarat, India | Germplasm collection | |
Department of Horticultural Sciences, Faculty of Agriculture, University of Tehran, Karaj, Iran | Genetics | e-mails: zzamani@ut.ac.ir; sarkhosha@gmail.com; http://can.ut.ac.ir/en/sciences%20and%20engineering/default.aspx |
Department of Horticultural Science, Faculty of Agriculture, Bu-Ali Sina University, Hamedan, Iran | Transformation | e-mail: Ershadi@basu.ac.ir; http://www.basu.ac.ir/ |
Iranain National Gene Bank , Mahdasht Road, Karaj, Iran | Germplasm collection | e-mail: mzahravi@yahoo.com; http://medomed.org/featured_item/national-plant-gene-bank-of-iran/ |
Agricultural and Natural Resources Research Center of Markazi Province, Arak, Iran | Germplasm collection | Sakine Faraji; http://manrrc.ir/ |
Department of Horticultural Sciences, Faculty of Agriculture and Natural Resources, Arak University, Arak, Iran | Genetics | e-mail: a-khadivi@araku.ac.ir |
Department of Plant Breeding , Science and Research Branch, Islamic Azad University, Tehran, Iran | Genetics, germplasm collection | Tayebe Basaki; http://www.riau.ac.ir |
Department of Horticultural Sciences, Faculty of Agriculture, Vali-e-Asr University of Rafsanjan, Iran | Genetics | e-mail: h_karimi1019@yahoo.com; en.vru.ac.ir/ |
Ferdowsi University of Mashhad, Faculty of Agriculture, Center of Pomegranate Research , Mashhad, Iran | Genetics | e-mail: zahra.nemati@rocketmail.com; https://en.um.ac.ir/ |
Department of Agricultural Biotechnology , College of Agriculture, Isfahan University of Technology, Isfahan, Iran | Genetics | e-mails: mtalebi@cc.iut.ac.ir; sayedt@cc.iut.ac.ir; https://www.iut.ac.ir/en/ |
Agriculture and Natural Resources Research and Education Center of Yazd, Yazd, Iran | Germplasm collection , breeding | e-mail: Asman2000@gmail.com, Mohammad Reza Vazifehshenas |
Pomegranate Research Station, Saveh Agriculture Research Center, Saveh, Iran | Germplasm collection , cultivars , genetics | Seyed Ziaedin Tabatabaei |
Unit of Deciduous Fruit Tree Sciences, Newe Ya’ar Research Center, Agricultural Research Organization, Israel | Cultivars , breeding, genetics, germplasm collection , horticulture | e-mail: vhhollan@agri.gov.il; http://www.agri.gov.il/en/people/733.aspx |
Department of Plant Pathology, Agricultural Research Organization, Volcani Center, Bet Dagan, Israel | Horticulture | e-mail: dezra@agri.gov.il; http://www.agri.gov.il/en/people/653.aspx |
Department of Post Harvest, Agricultural Research Organization, Volcani Center, Bet Dagan, Israel | Horticulture | e-mail: rporat@agri.gov.il; http://www.agri.gov.il/en/people/702.aspx |
Fruit Storage Research Laboratory, Kiryat Shmona, Israel | Horticulture | e-mail: fruitlab@netvision.net.il |
Migal - Galilee Research Institute, Kiryat Shmona, Israel | Chemistry | e-mail: rachel@migal.org.il; http://www.migal.org.il/rachel-amir |
Istituto Coltivazioni Arboree, Università di Palermo, Palermo, Italy | Cultivars | Francesco Sottile; http://www.unipa.it/Dipartimento-di-Colture-Arboree/ |
Department of Environmental and Agro-Forestry Biology and Chemistry, Section of Genetic and Plant Breeding , University of Bari Aldo Moro, Bari, Italy | Genetics | e-mail: agata.gadaleta@uniba.it; http://www.uniba.it/ |
University of Tsukuba, Tsukuba, Japan | Transformation | e-mail: ssumiko@sakura.cc.tsukuba.ac.jp; http://www.tsukuba.ac.jp/ |
Department of Plant Production , Faculty of Agriculture, Mu’tah University, Karak, Jordan | Cultivars | e-mail: owais@mutah.edu.jo; https://www.mutah.edu.jo/ |
Lebanese Agricultural Research Institute, Zahle, Lebanon; Faculty of Agricultural Sciences, The Lebanese University, Dekwaneh, Beirut, Lebanon | Cultivars | e-mail: lamis.chalak@gmail.com; https://www.ul.edu.lb/faculte/ |
Programa de Frutales, Campo Experimental Bajio, INIFAP, Celaya, Guanajuato, Mexico | Cultivars , breeding | e-mail: jaccobo77@hotmail.com; http://www.inifap.gob.mx/circe/SitePages/internas/bajio.aspx |
University College of Agriculture & Environmental Sciences, The Islamia University of Bahawalpur, Bahawalpur, Pakistan | Cultivars | e-mail: muhammad.nafees@iub.edu.pk; http://www.iub.edu.pk/ |
Plant Science and Microbiology Department, Universitas Miguel Hernández, Elche (Alicante), Spain | Horticulture, genetics | e-mail: rafa.font@umh.es; http://www.umh.es/contenido/Investigacion/:uor_106/datos_en.html |
Estacion Experimental Agraria de Elche, Elche, Elicante, Spain | Horticulture | e-mail: bartual_jul@gva.es; http://www.ivia.gva.es/ |
Instituto Valenciano de Investigaciones Agrarias, Moncada, Valencia, Spain | Genetics | e-mail: badenes_mlu@gva.es; http://www.ivia.gva.es/ |
Departamento de Produccíon Vegetal y Microbiologı´a, Escuela Politécnica Superior de Orihuela, Universidad Miguel Hernández, Orihuela, Alicante, Spain | Cultivars | e-mails: juanjose.martinez@umh.es; pablo.melgarejo@umh.es; https://www.umh.es/ |
Department of Horticultural Science, University of Stellenbosch, Stellenbosch, South Africa | Horticulture | e-mail: opara@sun.ac.za; https://www.sun.ac.za/english/faculty/agri/horticulture |
Tunisian national germplasm collection of pomegranate , Zerkin | Germplasm collection | – |
University of Sousse, Chott Mariem, Sousse, Tunisia | Cultivars , genetics, chemistry | e-mails: mb.mars@yahoo.fr; trifimokhtar@yahoo.fr; http://www.uc.rnu.tn/ |
Laboratory of Molecular Genetics, Immunology & Biotechnology , Faculty of Sciences, University El Manar, Tunis, Tunisia | Genetics | e-mail: Amel.SalhiHannachi@fsb.rnu.tn; |
Laboratory and Dry Land Crop Oasis, Institute of Arid Regions, Elfje Mednine Tunis, Tunisia | Selection , genetics | e-mail: mansourelhem@yahoo.fr; www.ira.agrinet.tn/ |
Department of Horticulture, Faculty of Agriculture and Natural Sciences, Recep Tayyip Erdoğan University, Rize, Turkey | Cultivars , breeding | e-mail: keziban.yazici@erdogan.edu.tr; https://erdogan.edu.tr/ |
West Mediterranean Agricultural Research Institute, Antalya, Turkey | Cultivars , breeding | e-mail: sahinalpaslan@tarim.gov.tr; |
Çukurova University, Faculty of Agriculture, Department of Horticulture, Adana, Turkey | Cultivars , horticulture, genetics | e-mail: ashen@cu.edu.tr; http://www.cu.edu.tr/eng/detay.aspx?pageId=812 |
Department of Horticulture, Faculty of Agriculture, University of Mustafa Kemal, Antakya, Hatay, Turkey | Cultivars | e-mail: ocaliskan@mku.edu.tr; http://www.mku.edu.tr/ |
Department of Horticulture, Ataturk University Agricultural Faculty, Erzurum, Turkey | Horticulture, genetics | e-mail: sercisli@atauni.edu.tr; https://www.atauni.edu.tr/ |
Alata Horticultural Research Institute, Erdemli-Mersin, Turkey | Germplasm collection | e-mail: cenapyilmaz@yahoo.com; https://arastirma.tarim.gov.tr/alata |
Turkmenistan Experimental Station of Plant Genetic Resources , Garrygala, Turkmenistan | Germplasm collection | – |
The Nikita Botanical Gardens of the Ukraine Academy of Agrarian Sciences, Yalta, Crimea, Ukraine | Germplasm collection | |
Paramount Farming Company, Bakersfield, California, USA | Horticulture | e-mail: EricM@paramountfarming.com; http://www.wonderfulorchards.com/ |
Department of Plant Sciences, University of California, Davis, California, USA | Genetics | e-mail: ltian@ucdavis.edu; http://www.plantsciences.ucdavis.edu/plantsciences/visitors/map.htm |
USDA/ARS Horticulture and Plant Breeding Unit, Horticultural Research Laboratory, Ft. Pierce, Florida, USA | Cultivars | e-mail: Ed.Stover@ars.usda.gov; https://iapreview.ars.usda.gov/main/site_main.htm?modecode=60-34-05-00 |
The National Clonal Germplasm Repository, Tree Fruit & Nut Crops & Grapes, USDA, ARS, UC Davis, Davis, California, USA | Germplasm collection | e-mail: John.Preece@ars.usda.gov; https://www.ars.usda.gov/pacific-west-area/davis-ca/natl-clonal-germplasm-rep-tree-fruit-nut-crops-grapes/ |
Horticulture and Landscape Architecture, Perdue College of Agriculture, West Lafayette, Indiana, USA | Horticulture | e-mail: hwetzste@purdue.edu; https://ag.purdue.edu/ |
Richard R. Schroeder Uzbek Research Institute of Fruit Growing , Viticulture, and. Wine Production , Tashkent, Republic of Uzbekistan | Germplasm collection | Mirmahsud M. Mirzaev |
Appendix 2
Pomegranate varieties and their cultivation regions
Country | Cultivation regions | Varieties |
---|---|---|
Afghanistan | Kandahar | Soor Shakari, Speen Shakari, Sheen, Sheen I, Soor Maranjani, Speen, Sedana, Speen Khozh, Soor I, Pundpostai |
Afghanistan | Helmand | Tursh Kaghazi, Gurmah, Speen Khozh I, Sarakhwagh, Speen I |
Afghanistan | Farah | Shirinak, Shirinak I,Fakhri, Fakhri I |
Afghanistan | Heart | Kadu Anar, Shirin, Fakhri |
Afghanistan | Kapisa | Tursh I, Maikhosh, Khog Sedana, Kacha Tuush, Speen Danadar |
Afghanistan | Nangarhar | Khog Bocha, Khog I, Pestakai, Danadar Pestakai, Taki Tursh, Srah trush, Tangali Tursh, Rankai Pastaki, Tursh Bocha, Tashgurghani, Speen Tursh, Tursh Bedana |
Afghanistan | Balkh | Shir-shakar, Zati, Kadu Anar I, Post Ghasp |
Afghanistan | Samangan | Kasagi, Surkhak, Safeid Nazok, Shirin Anar, Shirinak |
Albania | General | Tivarash, Devedishe, Majhoshe |
Algeria | General | Quares, Lahlou |
Azerbaijan | General | Nasimi, Aleko, Azerbaojan, Bala-Miursel, Giulosha, Guilosha Pink, Kaim-Nar, Krmyzy-Kabukh, Nazik-Kabukh, Shakh-Nar |
China | Sichuan | Qingpiruanzi |
China | Yunnan | Tianlvzi, Houpitianshazi, Tianguangyan, Lvpi, Hongmanao |
China | Xinjiang | Piyaman, Yechengdazi, Louke 4 |
China | Shandong | Daqingpitian, Dahongpao, Dahonpitian, Damayatian, Taishansanbai, Taishanhong, Tunisi, Qingpidali |
China | Zhejiang | Tunisruanzi, Yiseliesuantian, Qingpi |
Croatia | General | Barski Slatki, Ciparski, Glavas, Sladun |
Egypt | General | Arab, Manfaloty, Nab Elgamal, Wardy |
Georgia | General | Pirosmani, Gruzinskii No. 1, Gruzinskii No. 2, Vedzisuri, Lyaliya, Tengo, Imeretis Sauketeso, Bukistsikhe, Khorsha, Zugdidi, Erketuli, Forma No. 1, Forma No. 15, Forma No. 70, Shirvani, Apsheronskii Krasnyi, Burachnyi, Rubin, Frantsis, Sulu-nar, Kyrmyz Kabukh, Shir-anar, Shakh-anar, Gyuleisha Krasnaya, Apsheronskii Krasnyi, Sulunar, Imeretis Sauketeso |
Greece | General | Ermioni, Persefoni, Pluto, Porfyrogenniti |
India | Maharashtra | Bhagwa, Alandi, Phule Araka, Mridula, Ganesh, Karadi, Muskat |
India | Karnataka | Madhugiri, Bassein Seedless , Jyothi, Madhugiri, Paper Shell |
India | Gujarat | Dholka, Muskat Red, Kandhari, Ganesh |
India | Himachal Pradesh | Kandhari |
India | Andhra Pradesh | Ganesh, Paper Shelled, Muskati Red, Spanish Ruby |
India | Rajasthan | Jodhpuri Red, Jodhpuri White, Jalore Seedless |
India | Haryana | Chawla, Nabha, Country Large Red, Ganesh, Muskat Red, Paper Shell |
India | Tamil nadu | Velludu, Kabul Red, Yercaud-1 |
India | West Bengal | Ruby, Mridula, Ganesh |
Iran | General | Malas-e-Saveh, Malas-Torsh-Saveh, Rabab-e-Neyriz, Malas-e-Yazdi, Sishe Kape-Ferdos, Naderi-e-Budrood, Ardesstani Mahvalat, Bajestani Gonabad, Ghojagh Ghoni, Khazr Bardaskn, Galou Barik, Bajestan, Zagh, Shavar Daneh Ghermez, Sefid, Togh Gardan, Esfahani Daneh Ghermez, Alack, Alak Shirin, Alak Torsh, Maykhosh |
Iran | Esfahan | Naderi, Ravandi, Malas, Shahvar, Zagh, Shirin |
Iran | Tehran | Galou Barik, Malas, Ghojagh, Shirin, Arousak |
Iran | Sout-khorasan | Shisheh-cap |
Iran | Khorasan-e-Razavy | Shisheh-cap, Bajestani, Khazar, Ardestani, Ghand(Meshki), Malas, Leili |
Iran | Khozestan | Malas, Shirin |
Iran | Zanjan | Dousti, Shahvar, Malas, Meykhosh, Syah |
Iran | Semnan | Galou Barik, Sorkhak, Shahvar, Malas |
Iran | Sistan and Balouchestan | Bazmani, Sangani |
Iran | Fars | Rabab, Bereit, Farough, Kadrou, Ghojagh, Malas, Syah, Shahvar, Rami, Abr |
Iran | Ghom | Ghojagh, Shahpasand |
Iran | Kerman | Keyvani |
Iran | Kermanshah | Malas |
Iran | Mazandaran | Kolbad, Shekar, Malas, Lamsari |
Iran | Markazi | Malas, Agha Mohammad Ali, Alak, Syah, Shahvar |
Iran | Yazd | Malas, Meykhosh, Shahvar, Zagh, Gel, Togh Gardan, Souski |
Iraq | General | Ahmar, Aswad, Halwa, Salakhani |
Israel | General | Wonderful, Shani-Yonay, Acco, Emek, Kamel, 116-17, Rosh Hapered, Malisi, Black |
Italy | Sicily | Dente di Cavallo, Neirana, Profeta, Racalmuto, Ragana, Selinunte |
Italy | Apuglia | Chinonna, Cisternino |
Japan | General | Haku Botan |
Jordan | General | Khdaree, Hmadee Hmaree, Khdaree Sfaree, Maleese, Hlawi, Khashaby, Khdaree Hello, Bradee Sharabee Asfar, Hasmasi, Hmaree Hmadee, Bradee Sharabee Ahmar, Zeklabee, Zokom Albagel, Khratee Ahmar Hello, Khdaree Hmadee, Lfani Sharab, Zarori, Esari |
Libya | General | Khadouri |
Mexico | General | Apaseo |
Morocco | Meknes | Gjeigi, Dwarf ever Green, Grenade Jaune, Gordo de Javita, Djeibali, Onuk Hmam |
Pakistan | General | Kandahari anaar |
Saudi Arabia | General | Mangulati |
Saudi Arabia | Taif | Taify, Yemeni |
Spain | Murcia | Albar de Blanca, Agridulce de Ojós, Borde de Ojós, Casta del Reino, Piñonenca de Blanca, Piñón duro de Ojós, Piñón tierno de Blanca, Piñón tierno de Ojós, San Felipe de Blanca |
Spain | Alicante | Mollar de Elche, Borde de Albatera, Mollar de Albatera, Mollar de Crevillente, Mollar de Orihuela, Valenciana de Albatera |
Spain | Córdoba | Puente Genil |
Tajikistan | General | Kai-Achik-Anar |
Tunisia | General | Gabsi, Tounsi, Zehri, Chefli, Mezzi, Jebali, Garoussi, Kalaii, Zaghouani, Andalousi, Bellahi, Beyounsi, Florepleno Panache, Gabsi Khadouri, Garoussi Sahel, Kalali, Nabli |
Turkey | General | Hicaznar, Katırbaşı, Aşınar, Fellahyemez, Eksilik, Mayhoş II, Mayhoş IV, Tatlı Mayhoş, Çekirdeksiz, Lefan, Ekşi Göknar, Silifke Aşısı, Çevlik, Beynarı, Ekşi Kırmızı, Ernar, Gliksiz,, Hatay, Izmir 1, Izmir 1264, Izmir 1265, Janarnar, Katrbas, Yufka Kabu |
Turkey | Siirt | Zivzik |
USA | California | Wonderful, Early Wonderful, Early Foothill, Granada, Ruby Red, Balegal, Cloud, Fleshman, Crab, Francis, Green Globe, Home, King, Phoenicia, Sweet, Utah Sweet, Purple Heart, Eversweet |
Uzbekistan | General | Achik-Dona, Kazake-Anar, Kai-Achik-Anar, Kzyl-Anar |
Vietnam | General | Vietnamese |
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Holland, D., Bar-Ya’akov, I. (2018). Pomegranate (Punica Granatum L.) Breeding. In: Al-Khayri, J., Jain, S., Johnson, D. (eds) Advances in Plant Breeding Strategies: Fruits. Springer, Cham. https://doi.org/10.1007/978-3-319-91944-7_15
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