Abstract
Light microscopy has long been at the forefront of biological research, perhaps most significantly in the form of fluorescence microscopy. This technique, paired with the ongoing discovery and synthesis of increasingly brilliant fluorophores, allows for visualization of the internal machinations of cells with molecular specificity. However, until recently, a persistent limitation of fluorescence microscopy—the diffraction of visible light—has restricted elucidation of the subcellular organization and localization of molecules to spatial resolutions of 200–300 nanometers. The invention and implementation of several super-resolution fluorescence microscopies (SRFMs) over the last 10 years have circumvented this diffraction limit and allowed up to tenfold improvements in resolution. Applications of SRFM in cardiology research have already illuminated aspects of the cardiac nanoscale architecture which were previously unobservable, opening the door for new avenues of research. These discoveries include the sub-diffraction structure of the intercalated disk, the t-tubular network, and excitation-contraction coupling. In this chapter we will review SRFM methodologies, present some examples of their successful application in cardiac research, and discuss the techniques’ advantages, ongoing challenges, and future potential.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Agullo-Pascual E, Reid DA, Keegan S, Sidhu M, Fenyö D, Rothenberg E, et al. Super-resolution fluorescence microscopy of the cardiac connexome reveals plakophilin-2 inside the connexin43 plaque. Cardiovasc Res. 2013;100:231–40.
Agullo-Pascual E, Lin X, Leo-Macias A, Zhang M, Liang FX, Li Z, et al. Super-resolution imaging reveals that loss of the C-terminus of connexin43 limits microtubule plus-end capture and NaV1.5 localization at the intercalated disc. Cardiovasc Res. 2014;104:371–81.
Andronov L, Lutz Y, Vonesch JL, Klaholz BP. SharpViSu: integrated analysis and segmentation of super-resolution microscopy data. Bioinformatics. 2016;32:2239–41.
Baddeley D, Jayasinghe ID, Lam L, Rossberger S, Cannell MB, Soeller C. Optical single-channel resolution imaging of the ryanodine receptor distribution in rat cardiac myocytes. Proc Natl Acad Sci U S A. 2009;106:22275–80.
Betzig E, Patterson GH, Sougrat R, Lindwasser OW, Olenych S, Bonifacino JS, et al. Imaging intracellular fluorescent proteins at nanometer resolution. Science. 2006;313:1642–5.
Caetano FA, Dirk BS, Tam JH, Cavanagh PC, Goiko M, Ferguson SS, et al. MIiSR: molecular interactions in super-resolution imaging enables the analysis of protein interactions, dynamics and formation of multi-protein structures. PLoS Comput Biol. 2015;11:e1004634.
Case LB, Baird MA, Shtengel G, Campbell SL, Hess HF, Davidson MW, et al. Molecular mechanism of vinculin activation and nanoscale spatial organization in focal adhesions. Nat Cell Biol. 2015;17:880–92.
Cerrone M, Lin X, Zhang M, Agullo-Pascual E, Pfenniger A, Chkourko Gusky H, et al. Missense mutations in plakophilin-2 cause sodium current deficit and associate with a Brugada syndrome phenotype. Circulation 2014;129:1092–1103.
Chang H, Zhang M, Ji W, Chen J, Zhang Y, Liu B, et al. A unique series of reversibly switchable fluorescent proteins with beneficial properties for various applications. Proc Natl Acad Sci U S A. 2012;109:4455–60.
Dani A, Huang B, Bergan J, Dulac C, Zhuang X. Superresolution imaging of chemical synapses in the brain. Neuron. 2010;68:843–56.
De La Fuente S, Fernandez-Sanz C, Vail C, Agra EJ, Holmstrom K, Sun J, et al. Strategic positioning and biased activity of the mitochondrial calcium Uniporter in cardiac muscle. J Biol Chem. 2016;291:23343–62.
Franke C, Sauer M, van de Linde S. Photometry unlocks 3D information from 2D localization microscopy data. Nat Methods. 2017;14:41–4.
Granzier HL, Hutchinson KR, Tonino P, Methawasin M, Li FW, Slater RE, et al. Deleting titin’s I-band/A-band junction reveals critical roles for titin in biomechanical sensing and cardiac function. Proc Natl Acad Sci U S A. 2014;111:14589–94.
Heilemann M, van de Linde S, Schuttpelz M, Kasper R, Seefeldt B, Mukherjee A, et al. Subdiffraction-resolution fluorescence imaging with conventional fluorescent probes. Angew Chem Int Ed Engl. 2008;47:6172–6.
Hell SW, Wichmann J. Breaking the diffraction resolution limit by stimulated emission: stimulated-emission-depletion fluorescence microscopy. Opt Lett. 1994;19:780–2.
Hennig S, van de Linde S, Lummer M, Simonis M, Huser T, Sauer M. Instant live-cell super-resolution imaging of cellular structures by nanoinjection of fluorescent probes. Nano Lett. 2015;15:1374–81.
Hess ST, Girirajan TP, Mason MD. Ultra-high resolution imaging by fluorescence photoactivation localization microscopy. Biophys J. 2006;91:4258–72.
Holm T, Klein T, Loschberger A, Klamp T, Wiebusch G, van de Linde S, et al. A blueprint for cost-efficient localization microscopy. Chemphyschem. 2014;15:651–4.
Hou Y, Jayasinghe I, Crossman DJ, Baddeley D, Soeller C. Nanoscale analysis of ryanodine receptor clusters in dyadic couplings of rat cardiac myocytes. J Mol Cell Cardiol. 2015;80:45–55.
Huang B, Wang W, Bates M, Zhuang X. Three-dimensional super-resolution imaging by stochastic optical reconstruction microscopy. Science. 2008;319:810–3.
Huang B, Bates M, Zhuang X. Super-resolution fluorescence microscopy. Annu Rev Biochem. 2009;78:993–1016.
Jayasinghe ID, Baddeley D, Kong CH, Wehrens XH, Cannell MB, Soeller C. Nanoscale organization of junctophilin-2 and ryanodine receptors within peripheral couplings of rat ventricular cardiomyocytes. Biophys J. 2012;102:L19–21.
Johnson E, Seiradake E, Jones EY, Davis I, Grunewald K, Kaufmann R. Correlative in-resin super-resolution and electron microscopy using standard fluorescent proteins. Sci Rep. 2015;5:9583.
Kanchanawong P, Shtengel G, Pasapera AM, Ramko EB, Davidson MW, Hess HF, et al. Nanoscale architecture of integrin-based cell adhesions. Nature. 2010;468:580–4.
Kube S, Hersch N, Naumovska E, Gensch T, Hendriks J, Franzen A, et al. Fusogenic liposomes as nanocarriers for the delivery of intracellular proteins. Langmuir. 2017;33(4):1051–9.
Langhorst MF, Schaffer J, Goetze B. Structure brings clarity: structured illumination microscopy in cell biology. Biotechnol J. 2009;4:858–65.
Leo-Macias A, Agullo-Pascual E, Sanchez-Alonso JL, Keegan S, Lin X, Arcos T, et al. Nanoscale visualization of functional adhesion/excitability nodes at the intercalated disc. Nat Commun. 2016;7:10342.
Loschberger A, Franke C, Krohne G, van de Linde S, Sauer M. Correlative super-resolution fluorescence and electron microscopy of the nuclear pore complex with molecular resolution. J Cell Sci. 2014;127:4351–5.
Lukyanenko YO, Younes A, Lyashkov AE, Tarasov KV, Riordon DR, Lee J, et al. Ca(2+)/calmodulin-activated phosphodiesterase 1A is highly expressed in rabbit cardiac sinoatrial nodal cells and regulates pacemaker function. J Mol Cell Cardiol. 2016;98:73–82.
Macquaide N, Tuan HT, Hotta J, Sempels W, Lenaerts I, Holemans P, et al. Ryanodine receptor cluster fragmentation and redistribution in persistent atrial fibrillation enhance calcium release. Cardiovasc Res. 2015;108:387–98.
Malkusch S, Heilemann M. Extracting quantitative information from single-molecule super-resolution imaging data with LAMA—LocAlization microscopy Analyzer. Sci Rep. 2016;6:34486.
Munro ML, Jayasinghe ID, Wang Q, Quick A, Wang W, Baddeley D, et al. Junctophilin-2 in the nanoscale organisation and functional signalling of ryanodine receptor clusters in cardiomyocytes. J Cell Sci. 2016;129:4388–98.
Paez-Segala MG, Sun MG, Shtengel G, Viswanathan S, Baird MA, Macklin JJ, et al. Fixation-resistant photoactivatable fluorescent proteins for CLEM. Nat Methods 2015;12:215–218, 214 p following 218
Proppert S, Wolter S, Holm T, Klein T, van de Linde S, Sauer M. Cubic B-spline calibration for 3D super-resolution measurements using astigmatic imaging. Opt Express. 2014;22:10304–16.
Reid DA, Rothenberg E (2015) Single-molecule fluorescence imaging techniques. In: Encyclopedia of analytical chemistry, pp 1–20.
Rust MJ, Bates M, Zhuang X. Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM). Nat Methods. 2006;3:793–5.
Sage D, Kirshner H, Pengo T, Stuurman N, Min J, Manley S, et al. Quantitative evaluation of software packages for single-molecule localization microscopy. Nat Methods. 2015;12:717–24.
Shtengel G, Galbraith JA, Galbraith CG, Lippincott-Schwartz J, Gillette JM, Manley S, et al. Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure. Proc Natl Acad Sci U S A. 2009;106:3125–30.
Szymborska A, de Marco A, Daigle N, Cordes VC, Briggs JA, Ellenberg J. Nuclear pore scaffold structure analyzed by super-resolution microscopy and particle averaging. Science. 2013;341:655–8.
Tang AH, Chen H, Li TP, Metzbower SR, MacGillavry HD, Blanpied TA. A trans-synaptic nanocolumn aligns neurotransmitter release to receptors. Nature. 2016;536:210–4.
Te Riele AS, Agullo-Pascual E, James CA, Leo-Macias A, Cerrone M, Zhang M, et al. Multilevel analyses of SCN5A mutations in arrhythmogenic right ventricular dysplasia/cardiomyopathy suggest non-canonical mechanisms for disease pathogenesis. Cardiovasc Res. 2017;113:102–11.
Teng KW, Ishitsuka Y, Ren P, Youn Y, Deng X, Ge P, et al. Labeling proteins inside living cells using external fluorophores for microscopy. elife. 2016;5
Veeraraghavan R, Lin J, Hoeker GS, Keener JP, Gourdie RG, Poelzing S. Sodium channels in the Cx43 gap junction perinexus may constitute a cardiac ephapse: an experimental and modeling study. Pflugers Archiv Eur J Physiol. 2015;467:2093–105.
Veeraraghavan R, Lin J, Keener JP, Gourdie R, Poelzing S. Potassium channels in the Cx43 gap junction perinexus modulate ephaptic coupling: an experimental and modeling study. Pflugers Archiv Eur J Physiol. 2016;468:1651–61.
Wagner E, Lauterbach MA, Kohl T, Westphal V, Williams GS, Steinbrecher JH, et al. Stimulated emission depletion live-cell super-resolution imaging shows proliferative remodeling of T-tubule membrane structures after myocardial infarction. Circ Res. 2012;111:402–14.
Wang W, Landstrom AP, Wang Q, Munro ML, Beavers D, Ackerman MJ, et al. Reduced junctional Na+/Ca2+-exchanger activity contributes to sarcoplasmic reticulum Ca2+ leak in junctophilin-2-deficient mice. Am J Phys Heart Circ Phys. 2014;307:H1317–26.
Whelan DR, Bell TD. Super-resolution single-molecule localization microscopy: tricks of the trade. J Phys Chem Lett. 2015;6:374–82.
Wilhelm BG, Mandad S, Truckenbrodt S, Krohnert K, Schafer C, Rammner B, et al. Composition of isolated synaptic boutons reveals the amounts of vesicle trafficking proteins. Science. 2014;344:1023–8.
Wong J, Baddeley D, Bushong EA, Yu Z, Ellisman MH, Hoshijima M, et al. Nanoscale distribution of ryanodine receptors and caveolin-3 in mouse ventricular myocytes: dilation of T-tubules near junctions. Biophys J. 2013;104:L22–4.
Xu K, Zhong G, Zhuang X. Actin, spectrin, and associated proteins form a periodic cytoskeletal structure in axons. Science. 2013;339:452–6.
Yin Y, Rothenberg E. Probing the spatial organization of molecular complexes using triple-pair-correlation. Sci Rep. 2016;6:30819.
Zhang Z, Nishimura Y, Kanchanawong P. Extracting microtubule networks from superresolution single-molecule localization microscopy data. Mol Biol Cell. 2017;28:333–45.
Acknowledgments
The authors acknowledge the help and critical discussions with members of the Rothenberg and Delmar labs.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Ethics declarations
Sources of Funding
Work in the Rothenberg lab is funded by the NIH grants R01-GM057691 and R21-CA187612 and the American Cancer Society grant (ACS 130304-RSG-16-241-01-DMC). Research in the Delmar lab is supported by NIH grants RO1-GM57691, RO1-HL134328, and RO1-HL136179.
Conflict of Interest
Authors declare that they have no conflict of interest.
Ethical Approval
This article does not contain any studies with human participants or animals performed by any of the authors.
Rights and permissions
Copyright information
© 2018 Springer International Publishing AG, part of Springer Nature
About this chapter
Cite this chapter
Agullo-Pascual, E., Leo-Macias, A., Whelan, D.R., Delmar, M., Rothenberg, E. (2018). Novel Imaging Techniques in Cardiac Ion Channel Research. In: Thomas, D., Remme, C. (eds) Channelopathies in Heart Disease . Cardiac and Vascular Biology, vol 6. Springer, Cham. https://doi.org/10.1007/978-3-319-77812-9_14
Download citation
DOI: https://doi.org/10.1007/978-3-319-77812-9_14
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-77811-2
Online ISBN: 978-3-319-77812-9
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)