Abstract
In this chapter, we present recent works concerned with the derivation of a macroscopic model for complex interconnected fiber networks from an agent-based model, with applications to, but not limited to, adipose tissue self-organization. Starting from an agent-based model for interconnected fibers interacting through alignment interactions and having the ability to create and suppress cross-links, the formal limit of large number of individuals is first investigated. It leads to a kinetic system of two equations: one for the individual fiber distribution function and one for the distribution function of connected fiber pairs. The hydrodynamic limit, in a regime of instantaneous fiber linking/unlinking then leads to a macroscopic model describing the evolution of the fiber local density and mean orientation. These works are the first attempt to derive a macroscopic model for interconnected fibers from an agent-based formulation and represent a first step towards the formulation of a large scale synthetic tissue model which will serve for the investigation of large scale effects in tissue homeostasis.
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References
Alonso R, Young J, Cheng Y (2014) A particle interaction model for the simulation of biological, cross-linked fibers inspired from flocking theory. Cell Mol Bioeng 7(1):58–72
Alt W, Dembo M (1999) Cytoplasm dynamics and cell motion: two phase flow models. Math Biosci 156:207–228
Astrom JA, Kumar PBS, Vattulaine I, Karttunen M (2005) Strain hardening in dense actin networks. Phys Rev E 71:050901
Baskaran A, Marchetti MC (2008) Hydrodynamics of self-propelled hard rods. Phys Rev E 77:011920
Bertin E, Droz M, Gregoire G (2009) Hydrodynamic equations for self-propelled particles: microscopic derivation, stability analysis. J Phys A Math Theor 42:445001
Camazine S, Deneubourg JL, Franks NR, Sneyd J, Theraulaz G, Bonabeau E (2001) Self-organization in biological systems. Princeton University Press, Princeton, NJ
Chaudury O, Parekh SH, Fletcher DA (2007) Reversible stress softening of actin networks. Nature 445:295–298
Degond P, Motsch S (2008) Continuum limit of self-driven particles with orientation interaction. Math Models Methods Appl Sci 18:1193–1215
Degond P, Delebecque F, Peurichard D (2016) Continuum model for linked fibers with alignment interactions. Math Models Methods Appl Sci 26:269–318
DiDonna BA, Levine A (2006) Filamin cross-linked semiflexible networks: fragility under strain. Phys Rev Lett 97(6):068104
Engwer C, Hillen T, Knappitsch M, Surulescu C (2015) Glioma follow white matter tracts: a multiscale DTI-based model. J Math Biol 71(3):551–82
Frouvelle A (2012) A continuum model for alignment of self-propelled particles with anisotropy and density-dependent parameters. Math Models Methods Appl Sci 22:1250011
Ginelli F, Peruani F, Bär M, Chaté H (2010) Large-scale collective properties of selfpropelled rods. Phys Rev Lett 104:184502
Ha SY, Tadmor E (2008) From particle to kinetic, hydrodynamic descriptions of flocking. Kinet Relat Models 1:415–435
Head DA, Levine AJ, MacKintosh FC (2003) Distinct regimes of elastic response, deformation modes of cross-linked cytoskeletal, semiflexible polymer networks. Phys Rev E 68:061907
Hillen T (2006) M5 mesoscopic and macroscopic models for mesenchymal motion. J Math Biol 53:585–616
Ilina O, Friedl P (2009) Mechanisms of collective cell migration at a glance. J Cell Sci 122:3203–3208
Joanny JF, Jülicher F, Kruse K, Prost J (2007) Hydrodynamic theory for multi-component active polar gels. New J Phys 9:422
Karsher H, Lammerding J, Huang H, Lee RT, Kamm RD, Kaazempur-Mofrad MR (2003) A three-dimensional viscoelastic model for cell deformation with experimental verification. Biophys J 85:3336–3349
Peurichard D (2016) Macroscopic model for linked fibers with alignment interactions: existence theory and numerical simulations. SIAM Multiscale Model Simul 14:1175–1210
Peurichard D et al (2017) Simple mechanical cues could explain adipose tissue morphology. J Theor Biol 429:61–81
Taber LA, Shi Y, Yang L, Bayly PV (2011) A poroelastic model for cell crawling including mechanical coupling between cytoskeletal contraction and actin polymerization. J Mech Mater Struct 6:569–589
Vicsek T, Zafeiris A (2012) Collective motion. Phys Rep 517:71–140
Acknowledgements
This work has been supported by the “Engineering and Physical Sciences Research Council” under grant ref: EP/M006883/1 and by the National Science Foundation under NSF Grant RNMS11-07444 (KI-Net). Pierre Degond acknowledges support from the Royal Society and the Wolfson foundation through a Royal Society Wolfson Research Merit Award. Pierre Degond is on leave from CNRS, Institut de Mathématiques de Toulouse, France. Diane Peurichard acknowledges support by the Vienna Science and Technology Fund (WWTF) under project number LS13-029.
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Degond, P., Peurichard, D. (2017). Modelling Tissue Self-Organization: From Micro to Macro Models. In: Gerisch, A., Penta, R., Lang, J. (eds) Multiscale Models in Mechano and Tumor Biology . Lecture Notes in Computational Science and Engineering, vol 122. Springer, Cham. https://doi.org/10.1007/978-3-319-73371-5_5
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