Abstract
The human brain can be divided into two tissue categories, namely: gray matter that maybe associated with cognitive, motor, emotion, and visual processing, and white matter that facilitates neuronal communication between gray matter regions. To better understand the organization of white matter connections in the brain, white matter fiber tracts derived from a diffusion tensor image scan is estimated and visualized by publically available software toolsets. In general, one white matter fiber tract is visualized as a thin 3D cylinder, however this approach has many computational limitations, especially when trying to visualize thousands of fiber tracts that have varying size and length. To overcome this limitation, a very simple and efficient imposter approach is proposed, commonly used in the computer graphics community, that exploits the programmable pipeline architecture found in GPU-based parallel processing systems. Using 10,000 fiber tracts derived from a real DTI scan, we show the rendering speed of our imposter approach is 50% times faster, and requires 900% less memory, when compared visualization approach that uses 3D cylinders.
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Even 90° is biologically not likely, however this is the upper limit for our implementation.
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In our implementation, the radius \( r \) is always equal to 1, and the normal vector is computed relative to the x-z plane.
References
Schirski, M., et al.: Efficient visualization of large amounts of particle trajectories in virtual environments using virtual tubelets. In: Proceedings of the 2004 ACM SIGGRAPH International Conference on Virtual Reality Continuum and Its Applications in Industry, pp. 141–147. ACM, Singapore (2004)
Petrovic, V., Fallon, J., Kuester, F.: Visualizing whole-brain DTI tractography with GPU-based tuboids and LoD management. IEEE Trans. Vis. Comput. Graph. 13(6), 1488–1495 (2007)
Angel, E., Shreiner, D.: Interactive Computer Graphics with WebGL. Addison-Wesley Professional, Upper Saddle River (2014)
Phong, B.T.: Illumination for computer generated pictures. Commun. ACM 18(6), 311–317 (1975)
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Nesi, L.L., Rorden, C., Munsell, B.C. (2017). A Simple and Efficient Cylinder Imposter Approach to Visualize DTI Fiber Tracts. In: Wu, G., Laurienti, P., Bonilha, L., Munsell, B. (eds) Connectomics in NeuroImaging. CNI 2017. Lecture Notes in Computer Science(), vol 10511. Springer, Cham. https://doi.org/10.1007/978-3-319-67159-8_11
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DOI: https://doi.org/10.1007/978-3-319-67159-8_11
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