Skip to main content

Improving Pattern Detection in Healthcare Process Mining Using an Interval-Based Event Selection Method

  • Conference paper
  • First Online:
Business Process Management Forum (BPM 2017)

Part of the book series: Lecture Notes in Business Information Processing ((LNBIP,volume 297))

Included in the following conference series:

Abstract

Clinical pathways are highly variable and although many patients may follow similar pathway each individual will experience a unique set of events, for example with multiple repeated activities or varied sequences of activities. Process mining techniques are able to discover generalizable pathways based on data mining of event logs but using process mining techniques on a raw clinical pathway data to discover underlying healthcare processes is challenging due to this high variability. This paper involves two main contributions to healthcare process mining. The first contribution is developing a novel approach for event selection and outlier removing in order to improve pattern detection and thus representational quality. The second contribution is to demonstrate a new open access medical dataset, the MIMIC-III (Medical Information Mart for Intensive Care) database, which has not been used in process mining publications.

In this paper, we developed a new method for variations reduction in clinical pathways data. Variation can result from outlier events that prevent capturing clear patterns. Our approach targets the behavior of repeated activities. It uses interval-based patterns to determine outlier threshold based on the time of events occurring and the distinctive attribute of observed events.

The approach is tested on clinical pathways data for diabetes patients with congestive heart failure extracted from the MIMIC-III medical database and analyzed using the ProM process mining tool. The method has improved model precision conformance without reducing model fitness. We were able to reduce the number of events while making sure the mainstream patterns were unaffected. We found that some activity types had a large number of outlier events whereas other activities had a relatively few. The interval-based event selection method has the potential of improve process visualization. This approach is undergoing implementation as an event log enhancement technique in the ProM tool.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Van der Aalst, W.: Process Mining: Discovery, Conformance and Enhancement of Business Processes. Springer, Berlin (2011)

    Book  Google Scholar 

  2. Van Dongen, B.F., Medeiros, A.K.A., Verbeek, H.M.W., Weijters, A.J.M.M., Aalst, W.M.P.: The ProM framework: a new era in process mining tool support. In: Ciardo, G., Darondeau, P. (eds.) ICATPN 2005. LNCS, vol. 3536, pp. 444–454. Springer, Heidelberg (2005). doi:10.1007/11494744_25

    Chapter  Google Scholar 

  3. Mans, R.S., Van der Aalst, W.M.P., Vanwersch, R.J.B.: Process Mining in Healthcare: Evaluating and Exploiting Operational Healthcare Processes. Springer, Heidelberg (2015)

    Book  Google Scholar 

  4. Weiskopf, N.G., Weng, C.: Methods and dimensions of electronic health record data quality assessment: enabling reuse for clinical research. J. Am. Med. Inform. Assoc. 20(1), 144–151 (2013)

    Article  Google Scholar 

  5. Van der Aalst, W., Adriansyah, A., et al.: Process mining manifesto. In: Daniel, F., Barkaoui, K., Dustdar, S. (eds.) BPM 2011. LNBIP, vol. 99, pp. 169–194. Springer, Heidelberg (2012). doi:10.1007/978-3-642-28108-2_19

    Chapter  Google Scholar 

  6. Bose, R.J.C., Mans, R.S., Van der Aalst, W.: Wanna improve process mining results? In: 2013 IEEE Symposium on Computational Intelligence and Data Mining (CIDM). IEEE (2013)

    Google Scholar 

  7. de San Pedro, J., Cortadella, J.: Discovering duplicate tasks in transition systems for the simplification of process models. In: La Rosa, M., Loos, P., Pastor, O. (eds.) BPM 2016. LNCS, vol. 9850, pp. 108–124. Springer, Cham (2016). doi:10.1007/978-3-319-45348-4_7

    Chapter  Google Scholar 

  8. Vázquez-Barreiros, B., Mucientes, M., Lama, M.: Mining duplicate tasks from discovered processes. In: ATAED@PetriNets/ACSD (2015)

    Google Scholar 

  9. Van der Aalst, W., et al.: Process mining: a two-step approach to balance between underfitting and overfitting. Softw. Syst. Model. 9(1), 87 (2010)

    Article  Google Scholar 

  10. Broucke, S.V.: Advances in process mining: artificial negative events and other techniques (2014)

    Google Scholar 

  11. da Silva, L.F.N.: Process mining: application to a case study (2014)

    Google Scholar 

  12. Lu, X., Fahland, D., Biggelaar, F.J.H.M., Aalst, W.M.P.: Handling duplicated tasks in process discovery by refining event labels. In: La Rosa, M., Loos, P., Pastor, O. (eds.) BPM 2016. LNCS, vol. 9850, pp. 90–107. Springer, Cham (2016). doi:10.1007/978-3-319-45348-4_6

    Chapter  Google Scholar 

  13. Suriadi, S., et al.: Event log imperfection patterns for process mining: towards a systematic approach to cleaning event logs. Inf. Syst. 64, 132–150 (2017)

    Article  Google Scholar 

  14. Johnson, A.E., et al.: MIMIC-III, a freely accessible critical care database. Sci Data 3, 160035 (2016)

    Article  Google Scholar 

  15. MIMIC medical database. MIMIC-III critical care database (2015). https://mimic.physionet.org/gettingstarted/access/. Accessed 9 Mar 2017

  16. Kurniati, A., et al.: The assessment of data quality issues for process mining in healthcare using MIMIC-III, a publicly available e-health record database (2017)

    Google Scholar 

  17. Adriansyah, A., et al.: Measuring precision of modeled behavior. IseB 13(1), 37–67 (2015)

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Amirah Alharbi .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer International Publishing AG

About this paper

Cite this paper

Alharbi, A., Bulpitt, A., Johnson, O. (2017). Improving Pattern Detection in Healthcare Process Mining Using an Interval-Based Event Selection Method. In: Carmona, J., Engels, G., Kumar, A. (eds) Business Process Management Forum. BPM 2017. Lecture Notes in Business Information Processing, vol 297. Springer, Cham. https://doi.org/10.1007/978-3-319-65015-9_6

Download citation

Publish with us

Policies and ethics